LOCUS       XM_073342989            8021 bp    mRNA    linear   VRT 19-APR-2025
DEFINITION  PREDICTED: Lepidochelys kempii ATPase copper transporting beta
            (ATP7B), transcript variant X2, mRNA.
ACCESSION   XM_073342989
VERSION     XM_073342989.1
DBLINK      BioProject: PRJNA1251686
KEYWORDS    RefSeq.
SOURCE      Lepidochelys kempii (Atlantic ridley)
  ORGANISM  Lepidochelys kempii
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira;
            Americhelydia; Chelonioidea; Cheloniidae; Lepidochelys.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_133256) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_965140265.1-RS_2025_04
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 04/18/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8021
                     /organism="Lepidochelys kempii"
                     /mol_type="mRNA"
                     /isolate="rLepKem1"
                     /db_xref="taxon:8472"
                     /chromosome="1"
                     /geo_loc_name="USA: Quincy, Massachusetts"
                     /collection_date="2018-12-12"
     gene            1..8021
                     /gene="ATP7B"
                     /note="ATPase copper transporting beta; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 9 Proteins"
                     /db_xref="GeneID:140910886"
     CDS             178..4572
                     /gene="ATP7B"
                     /codon_start=1
                     /product="copper-transporting ATPase 2 isoform X2"
                     /protein_id="XP_073199090.1"
                     /db_xref="GeneID:140910886"
                     /translation="

MASSMSSSPPSCVWEPTMKQNFAFDNIGYEGSTENTPSQDMLPQMSTVTVNILGMTCQSCVQSIEGRISKVKGVVSTKVSLEQSNAVVKHIQSEIGPQEICQEIGDMGFDASIAEGRTTPLSVRSTSLGEALMKLRVEGMTCQSCVNTIEGKIGKLHGVLRIKVSLSNQEAVIAYQPYIIQPEDLKNHIDNIGYESTIKSKLAPLKLGMIDLERLQTTSTKKTPASLNNSNVKPAVGKMNSTTTMTLGVEGMHCRSCVKNIEGNISGLPGVQSIKVSLEYKNAVVQFNPNVITPVSLQQAIEALQPGNFKVSLPNGVEANNGELLSKAAFSSPQLRSTFSGDQLTSTTVLSIDGMTCGSCVQSIEGTMSQRKGVQHISVSLVERTGTIHYNSTVTNSEELRGAIEDMGFDASILTDTTTWKYMDQPLFRDATIHPNTWESASQRTENVSESSHQGYMSDVQPKNSSLDSPKPHSVATTEKCFMQITGMTCASCVSNIERNLQKEDGIVSVLVALMAGKAEIKYKPESIQPLEIVQLIQNLGFDATVIEDHTDTDGNVELIITGMTCASCVHNIESKLTRTNGIFYASVALATSKAHIQFDPEIIGPRDIIQIIEGIGFHASLAKRDPNAHNLDHKKEIKQWRKSFLCSLVFGIPVLILMIYMLIPAGQQHGSMVLERNLIPGLSILNLLFFVLCTLVQFLGGWYFYVQAYKSLKHKTANMDVLIVLATTIAYIYSCVILVVAIAEKAEESPVTFFDTPPMLFVFISLGRWLEHIAKSKTSEALAKLMSLQATEATIVTLGPDHSVIREEQVAVELVQRGDIVKVVPGGKFPVDGKVIEGSSMADESLITGEAMPVTKKPGSTVIAGSINAHGSVLVNATHVGSDTTLAQIVKLVEEAQMSKAPIQQLADKFSGYFVPFIIIISTATLLVWITIGFINFDVVQKYFPHQNKHLSKAEVIVRFAFQTSITVLCIACPCSLGLATPTAVMVGTGVAAQNGILIKGGKPLEMAHKIKTVMFDKTGTITCGVPKVMRMLLLGDTAKLSLKKVLAIVGTAEASSEHPLGVAVTKYCKEELGTESLGYCTDFQAVPGCGISCKVRNVEAILGQSEQRLSEQNAYLSSVSTVSLGHSSSIMVSESDGEAAPLTYSVLIGNREWMKRNGLLISSDVNDAMTGHEMKGQTAILVAIDGALCGMIAIADTVKQEAALAVHTLQNMGIDVVLITGDNRKTAKAIATQVGIKKVFAEVLPSHKVAKVQELQNEGKKVAMVGDGVNDSPALAGADIGIAIGTGTDVAIEAADVVLIRNDLLDVVASIHLSKRTVRRIRINLVLALIYNLLGIPIAAGVFMPIGIVLQPWMGSAAMAASSVSVVLSSLQLKCYKKPGTERYEAKAQGHMKPLTPSQISVHIGMDDRRRDSPRPTAWDQISQVSLSSLTSNKLHRHGLFREEEGGKWSLLTNDRDEEQYI"

ORIGIN      

ggcagggggcgtgccagggtgggggccgtgctcccgggtttgcagggaggagcagtgaagataaggcaagaggatggtgggtggtgtaccccgggccacagaccacggtgtataacttcacattacttcctacaccactgggcattatttctgcatgtgtctcttcattatggcaaaatggcttcgtctatgtctagctcccctcctagttgtgtatgggaaccaaccatgaagcagaattttgcctttgacaacatcggctacgaagggagcactgaaaatacgccctctcaagatatgcttcctcaaatgagcaccgtcacggtcaatattttgggtatgacttgccagtcttgtgtgcagtcgatagagggcagaatttccaaggtgaagggcgttgtgagcaccaaggtctcccttgagcagagcaatgctgtagtaaaacatatacagtcagaaataggtccccaagagatttgccaggaaattggagacatgggctttgatgccagcattgcagaaggaagaacgacaccattatctgtaagatcaacatccttgggagaagcactaatgaagctgcgggtagaaggtatgacatgccaatcttgtgtcaacaccattgaaggaaagattggaaaactacatggcgtgttgagaatcaaagtctccctcagtaaccaagaagcagtcattgcttaccagccttacatcattcaacctgaagacctcaaaaaccacatagataacattgggtatgaaagcactattaagagcaagctagccccattaaagcttggtatgattgatctagaacgcttgcagactacaagcacaaagaaaactccagccagcctgaacaatagtaatgtgaagccagcggtaggcaaaatgaatagtacaactactatgacgctgggagtagaagggatgcattgcaggtcttgcgtcaaaaacattgaaggaaatatatccggtcttccaggcgtacaaagtattaaagtgtcattggaatataaaaatgctgtcgtgcaatttaacccaaacgtaattaccccagtatctttgcaacaagccattgaggcccttcaacctggtaactttaaagtatccctccctaatggagtggaagcaaataatggagagcttttatcaaaggcagcattttcatcacctcagcttcgtagcacattctctggggatcagctgacaagcacaactgtacttagtattgatggaatgacctgtggatcctgtgtacagtccatagaaggcacaatgtcccaaagaaaaggggtacaacatatatcagtttcgttagttgaaaggactggaaccatacactacaattcaactgtaactaattcagaagagctaagaggcgctatagaggacatgggatttgatgcttccattctcacagataccaccacttggaaatatatggatcagcctcttttcagggacgctacaattcaccctaatacttgggagtcagcttcccagagaacagaaaatgtttctgaatcctctcatcaaggctacatgtctgatgtccagccaaagaattcttcccttgatagtccaaagccacacagtgtagcaacaacagaaaagtgctttatgcagatcacaggcatgacctgtgcatcatgtgtgtcgaacattgaaagaaatctgcaaaaagaagatggtatcgtttcagtgctagtagcactgatggcaggaaaagcggagataaaatacaagccagagagcattcagcctcttgaaatagtacagctgatccaaaacttgggcttcgatgctacagttatagaagaccatactgatacagatggcaatgtagagcttattattacggggatgacttgtgcttcctgtgttcacaatattgaatccaaactaaccagaactaatggcatcttctatgcctctgtggcacttgctaccagcaaagctcacatccagtttgatcctgaaatcattggacctcgagatattatacaaattattgagggaattggttttcatgcttccttggccaagagagaccctaatgctcataacttggatcacaaaaaggaaataaaacaatggaggaaatctttcctgtgcagcctagtgtttggaatccctgtcttaatcttaatgatatatatgctaatacctgctggccaacagcatggcagtatggtgctggaacgaaatctaattcctggattatctattttaaatcttctcttctttgtcctgtgcactttagttcagttcctcggtggatggtacttttatgtccaagcttacaaatcactgaagcacaaaacagccaatatggatgtactgattgtgctggccacaactattgcttatatatactcttgtgtgatcttggtggtggctatagctgaaaaagcagaggaaagccccgtcacgttctttgacacaccacctatgttgttcgtattcatttctcttgggagatggttggaacacatagcaaagagtaaaacatcagaagcacttgctaaactaatgtctctccaagctactgaagctaccatagtgactcttggacctgaccactccgtcatcagggaggagcaggtggctgttgaactggttcagcggggtgacattgtaaaagttgtccctggtgggaagttcccagttgatggaaaagtcattgaaggcagctctatggcagatgaatctctcattactggggaagccatgccagtcactaaaaaacctgggagcacagtgattgcaggttctataaatgcacatggctcagttctcgttaatgcaactcacgttgggtctgacaccaccctggcacaaattgtgaaattggtagaagaagctcagatgtcaaaggcacccattcagcaattggctgataagtttagtggatattttgttccatttatcatcatcatttcaacagcgacattgctagtgtggatcacaattggttttataaactttgatgttgttcagaaatactttcctcatcagaacaaacacctctcaaaagctgaagtaatagtgaggtttgcatttcaaacctcaatcactgtgttgtgcattgcatgtccctgttccttgggcttggctactccaacagctgtgatggtgggcacaggagttgctgctcagaatggtattctcatcaaaggtggaaaacccctggaaatggcccacaagataaagactgtgatgtttgataaaactgggaccatcacctgtggcgttcctaaagtcatgaggatgctcttgctaggggacacggctaagctgtccctaaagaaggtacttgcaattgtcggcactgcagaagccagcagtgagcatcccttaggagtggctgtcactaaatactgtaaagaggaacttggcaccgagagcctgggatactgcacagattttcaggcagtcccaggctgtggaatcagctgtaaagtgcgcaatgtggaagctatactgggccagagtgagcagagactgagtgagcagaatgcttacctgagcagtgtcagcacggtttcgctgggacacagttcatcgatcatggtctctgaatctgatggtgaagcagcccctctgacctactcagtgctgattggaaatcgtgaatggatgaaacggaacggcttgcttatatccagtgatgttaatgatgcaatgacaggccatgaaatgaaaggacagacagccatattggtggctatagatggtgcgttgtgtggaatgatcgcgatagcagataccgtcaaacaggaggcagcgcttgctgtgcacactctgcaaaatatgggaatagatgtggtgctaataacaggggacaacagaaaaactgcaaaagcaattgctactcaggttggcatcaaaaaggtctttgctgaggttctgccctctcacaaagtcgcaaaggttcaggaactccagaacgaagggaagaaggttgccatggttggagatggagtcaacgattccccggcattggctggagcagacattggcattgctattggaacaggcacggatgttgccattgaagctgcagacgtcgttcttattcgaaatgacttactggacgtggttgctagtattcatctatcaaagaggacagtaagaagaatacgaataaatctggtccttgccttaatttataatctgcttgggatacctatagcggcaggggtgttcatgcctattggaattgttctgcagccatggatggggtcagctgcaatggcagcttcttccgtatctgtggtgctatcttccctgcaactgaaatgctacaagaagccaggaactgaaaggtatgaagcaaaagctcaaggccacatgaagccactgactccttcccaaatcagtgttcacattgggatggacgacaggagacgggattcacccaggccaactgcctgggatcagattagtcaagtgtctctttcctctctgacttcaaacaagctgcacagacatggtttgtttagagaggaagaaggtggcaagtggtcactgctcactaatgaccgagatgaagaacagtacatttaaatgctgcatcccatcactgaacatgaagtcactgtgattcttcaccattggcagcgatgaccacaagacccacataagtataaatggaaccctgatgttccagtttgcaaagcagctcagaaattcagcattagattgtgtgaattatgattttgtcagttcacaaataatttccagtcattgaaaaagcttgagaccctacaatgaattatgccctttacttcttgcgcagtgggaagttggagtccacaaagcctaacaggacccctacgttgtggatcagttactgagaatcaaaaccccagcctgtccagtctcattgactctcttgtgcttctttatggaacttctgtgaaaagatttttaaattaaatgacctagaaaatgaatttggcagaaagtgaaaaccattaaaccggacatcaaatagctctatatttggggatcatatttttacatagaatcaaatctagtcatctcaacatgggaaaattttatatttagggctccgacaacatgtgtgtgtttgattagcacaaaaatatatttattgtatattttgctgtgcataaaaattgtaaaattctgtttcaaagatgaccatgtatcttatagcatcactaattgtattttatgaaacgtctccatttgccaaacttgcttgctgtgtgcaactactcctcttaggttttccagttttctcctgtgtgttctttggagccctttcttcccagtaaagttccacctttagacatttgttatgtcttcagatttttcccatgggatgagatcctacaaggcaccggggaccctgcaattcctgttgaaatccacagagtttgagctcctgtcaaggttctttccccactctgaacgctagggtacagatgtggggacctgcatgaaaacctcctaagcatatctttaccagcttaggtcaaaacttccccaaggtacaaaatattccaccctttgtccttggattggccgctaccaccaccaaacaaatactggttactggggaagagctgtttggaaacatcttccccccaaatacttcccaaaaccttgcaccccacttcctggacaaggtttggtaaaaagcctcaccaatttgcataggtgaccacagacccaaacccttggatctgagaacaatgaaaaagcattcggttttcttacaagaagacttttttaatagaaatagaagtaaagaaatcccctctgtaaaatcaggatggtagataccttacagggtaattagattcaaaacagagagaatccctctaggcaaaaccttaagttacaaaaaagatacacagacaaatagttattctattcagcacaattcttttctcagccatttaaagaaatcctaatctaacacatacctagctagattacttactaaaagttctaagactccattcctggtctatccccggcaaaagcagcatatagacagacagagaccctttgtttttctccctcctcccttttgaaagtatcttgtctcctcattggtcattttggtcaggtgccagcgaggttacctttagcttcttaaccctttacaggtgagaggagttttcctctggccaggagggattttaaaggggtttacccttccctttatatttatgacagctcctctctgggttttactctggttcaggatagctcaccattttgtcaaatcttttgacactcctgataactgcagtgttcagctatttctttgtgcagagtggcataaatgtggcagtgtaagccatcctggtggctcaattattggtacgctcatgctaatgcattgacgagatgctttccgacttggagtgttttgttcttggtcctgatgggagctagaatgttagaggtgacatgctcagtctctgtgctgatggattagccaacagtgcttttcaaggactctgtggaagttgtggggacacctcaaaagccaaggttcaacagagaggcagggtttgggaggctgttctgtgcaaatggcaggtgagaaagaagtagtaggttaaagcccatctgtaactccactcaaaatccctcttgatatcttgtgttagagctgggtgcttaaagtaaagtccatgcctgaaaactcaccctatcccctttaaaaattactgcattattacagatcacgtcaagctaaaagggactcttacttcatctctgagtttatcttggaccacaaacactacagccaatgcttaaaaattgccactaggaggcaattgtatatataacaataattatactgatgtaacagagaacagagcatgaccaagtgttcatgggattccagggtggttggagggggtggggggaaaagggtttgagattactgtactgtttaaatagcatcacataacacagcttgttagtcgtttaaaataaaagtgtaaaccgattaaaaatggagataatagtgcatggccaccagactttcatttattctggtatgaatcatctcagcagtgctagctgtttgtcatttaatcctattctggtttatagcccgtgaagactttggaatttatttaaatggagctttaacatttttgtagtgttttatctccctgcttggggtagtgtaataacaaatcaaggtggaagagaaaagccttctctcatgctgctaaagtatgagcttaatcaccgcaactttgtttccaaattcaccctccaatacttgtctcttagtcagggcatttggagttaggtgcttcagtgagctgagtgggtgaaatcctggccccattgaagtaaaaaaaatctgaagttgggaagtggggcaggattttaccctggtaaaagatcccaaatcattgccctgggcagtggtgaaagcactggtttggtttggtttaaagtctgccagtttccctgcaaagggccaaatcatgtttccactaaagtaaatgtccacactccagcagactctgagggaaagagtgttgtgttcataacattggaaattggttctaatcgtaatgttctatcctttgcatgtcctttttaataatttccttatatttaggttcctgtaaatgacccattcatctctgttgactaatcacaacatttgctaggatgtaatacactgatttttttcacatttctgtttcaaaactataaaaactttttagataatttaaaagtatacaactgtaaaaatatccagtaaaacatgcaatacctggctggtcttggtcccagtgagaggttttctattgtttggactaatttaaaatttttcatatcaaactgtagaataaatctgggtttcttgtcacatttttctctctcttttgggtaagtgaaacaaaatctgagattaaacagaagctattggaccgcagaatctgcacatctgatgtgccgtgagtagcccaggttgataggatgcagctttcagaagcaat

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