LOCUS       XM_072929368            2732 bp    mRNA    linear   VRT 07-APR-2025
DEFINITION  PREDICTED: Taeniopygia guttata dicer 1, ribonuclease III (DICER1),
            transcript variant X7, mRNA.
ACCESSION   XM_072929368
VERSION     XM_072929368.1
DBLINK      BioProject: PRJNA1244912
KEYWORDS    RefSeq.
SOURCE      Taeniopygia guttata (zebra finch)
  ORGANISM  Taeniopygia guttata
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves;
            Passeriformes; Passeroidea; Estrildidae; Estrildinae; Taeniopygia.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_133030) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_048771995.1-RS_2025_04
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 04/02/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2732
                     /organism="Taeniopygia guttata"
                     /mol_type="mRNA"
                     /db_xref="taxon:59729"
                     /chromosome="5"
     gene            1..2732
                     /gene="DICER1"
                     /note="dicer 1, ribonuclease III; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 4
                     ESTs, 2 Proteins"
                     /db_xref="GeneID:100227750"
     CDS             356..2614
                     /gene="DICER1"
                     /codon_start=1
                     /product="endoribonuclease Dicer isoform X2"
                     /protein_id="XP_072785469.1"
                     /db_xref="GeneID:100227750"
                     /translation="

MKSPALQSLIMAGLQLMTPASSPMGPFFGLPWQQEAIHDNIYTPRKYQVELLEAALDHNTIVCLNTGSGKTFIAVLLTKELSYQIRGDFNKNGKRTVFLVNSANQVAQQVSAVRTHSDLKVGEYSSLEITESWTKEKWSQEFSKHQVLVMTCHVALTVLRNEYLSLSNINLLVFDECHLAIQDHPYREIMKICEDYPSCPRILGLTASILNGKCDPAELEEKIQKLEKILKSNAETATDLVVLDRYTSQPCEIVVDCGPYTDKSGLYGRLLKELDEALAFLNDCNISVLSKERDSTLISKQILSDCRAVLVVLGPWCADKVAGMMVRELQKYIKHEQEELHRKFLLFTDTFLRKIHALCEEHFSPASLDLKFVTPKVIKLLEILRKYKPYERQQFESVEWYNNRNQDNYVSWSDSEDDDEDEEIEEKEKPETNFPSPFTNILCGIIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFITGHGIGKNQPRNKQMEVEFRKQEEVLRKFRAHETNLLIATSIVEEGVDIPKCNLVVRFDLPTEYRSYVQSKGRARAPISNYIMLADTDKIKSFEEDLKTYKAIEKILRNKCSKSVDASETETEPIVDDDDVFPPYVLRPDENSPRVTINTAIGHINRYCARLPSDPFTHLAPKCKTWELPDHTFYSTLYLPINSPLRASIVGPPMSCARLAERVVALICCEKLHKIGELDDHLMPVGKETVKYEEELDLHDEEETSVPGRPGSTKRRQCYPKA"

     misc_feature    479..1072
                     /gene="DICER1"
                     /note="DEXH-box helicase domain of endoribonuclease Dicer;
                     Region: DEXHc_dicer; cd18034"
                     /db_xref="CDD:350792"
     misc_feature    order(479..490,497..499,548..571,692..694,881..883,
                     974..976)
                     /gene="DICER1"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:350792"
     misc_feature    order(656..661,728..733,806..808,812..817,824..826,
                     899..907)
                     /gene="DICER1"
                     /note="nucleic acid binding site [nucleotide binding];
                     other site"
                     /db_xref="CDD:350792"
     misc_feature    1172..1450
                     /gene="DICER1"
                     /note="Partner-binding domain of the endoribonuclease
                     Dicer; Region: Dicer_PBD; cd15903"
                     /db_xref="CDD:277191"
     misc_feature    order(1181..1186,1193..1195,1199..1204,1379..1384,
                     1391..1396,1403..1405,1412..1417,1424..1426)
                     /gene="DICER1"
                     /note="Trbp binding interface [polypeptide binding]; other
                     site"
                     /db_xref="CDD:277191"
     misc_feature    1469..2047
                     /gene="DICER1"
                     /note="C-terminal helicase domain of the endoribonuclease
                     Dicer; Region: SF2_C_dicer; cd18802"
                     /db_xref="CDD:350189"
     misc_feature    order(1700..1708,1916..1918,1973..1975,1979..1981)
                     /gene="DICER1"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:350189"
     misc_feature    order(1928..1930,1934..1936,2009..2011,2015..2017)
                     /gene="DICER1"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:350189"
     misc_feature    2243..2509
                     /gene="DICER1"
                     /note="Dicer dimerization domain; Region: Dicer_dimer;
                     pfam03368"
                     /db_xref="CDD:460900"
ORIGIN      

gccgtcccgggcccaggtgaatggagggacctgacagctgcggggactgaggcggcggcggggaaatggcggcggcgggagcacaatgagacgcggcctgtagtagggggaagcgccgggctgggtccggtccgagcaggttacctagggtgaaacaaaattacaggattggagactctggaaaagctcagcatcagcgtttgagagtcaaggcttacaaattatgtgattaatctacaagctgatatcatgatgtcaaaatgcagttcaggaagcataaacacagagactgcggaaattaaaacgtaggctgtgttggaacaaaaatgcaatgaaagaaacactggatgaatgaatgaaaagccctgctttgcaatccctcatcatggcgggactgcagctcatgacccctgcttcctccccaatgggtccattttttggactaccatggcaacaagaagcaattcatgataacatttacacgccaagaaaatatcaggttgaactgcttgaagcagctttggatcataatacaatagtctgcttaaacactggctcagggaagacttttattgcagtactactcactaaagagctgtcctatcagatcaggggagatttcaacaaaaatggaaagaggactgtgttcttggtcaactctgcgaatcaagttgctcaacaagtgtcagctgtcaggacacattcagaccttaaagtgggagagtattcgagtttggagataactgaatcatggacaaaagagaaatggagtcaggaattctctaagcatcaggttctggttatgacatgtcatgttgctttgactgttttgagaaatgagtatttatccctgtcaaatattaatcttctggtgtttgatgagtgccatcttgcaatccaggatcatccataccgtgaaattatgaagatctgtgaggattatccatcatgtcctcgaattttgggattaacggcttccattttaaatgggaaatgtgatcctgctgagttagaggagaagatccagaaactggagaaaattctgaagagcaatgccgaaactgcaactgatttggtggtcttggacagatatacttctcagccatgtgagattgttgtagactgtggaccatatactgacaaaagtgggttgtatggaagattattaaaggaattggatgaagcacttgctttcctaaatgactgcaacatatctgtactttcaaaagaaagagattctaccttaatttctaagcagatattgtcagactgtcgagctgtgttggttgttctgggaccgtggtgtgcagataaggtagctgggatgatggtgagagaactgcagaagtatatcaaacatgaacaagaggagctgcacaggaaatttttattgtttacagacactttcctaaggaaaatacatgcactctgtgaagagcacttctcgcctgcctcacttgacctgaaatttgtgaccccaaaagtaataaagctgcttgaaatcttgcgcaaatacaaaccatatgaacggcagcagtttgaaagtgttgaatggtataacaataggaatcaggataattacgtgtcttggagtgactctgaagatgatgatgaggatgaagaaattgaggagaaagagaagccagagactaatttcccatctccctttactaatattttatgtggaattatttttgtggaaagaagatacacagcagttgttctaaataggttgataaaagaagctggcaagcaagatccagaactggcttacatcagtagcaattttataactggacatggcattggcaagaaccagcctcgtaacaagcagatggaagtagaatttagaaaacaggaagaggttcttagaaaatttcgagcacatgagaccaacctacttattgctactagtattgtggaagaaggtgttgacataccaaaatgcaatttggtggtgcgttttgatttgcccacagagtaccgttcctatgtgcagtcaaaaggaagagctagagcaccaatttccaattacattatgttagcagatacagacaaaatcaaaagttttgaagaagatcttaagacatacaaagcaattgagaagatcctccgaaacaaatgctcaaaatctgtcgatgccagtgaaactgaaactgaacccattgtggatgatgacgatgtctttccaccctatgtattgaggccagatgaaaacagtccgagggttactattaacactgctattggacacataaataggtactgcgctagattaccaagtgatccatttacacacctggctcccaagtgtaagacctgggaactacctgaccatacgttttactctactctctacctgccaatcaactcaccacttcgagcttcaattgttggccctccaatgagttgtgcaagattggctgaaagagttgtcgctcttatttgctgtgaaaaactgcacaaaattggtgaactggatgatcatttgatgccagttggtaaagaaacggttaaatatgaggaggaacttgatttacacgatgaagaagaaaccagtgttccaggaaggccaggctctacaaaacgaagacagtgctatcctaaagcttgaaggcttgccagtgagggagcagagccacggcagcgggaccagcacagggagtaggaggcacaagcagcctcacagggcaatgtaggacagcacagacagcaaagattccagcactatg

//