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Previous release (v1)
2025-11-04 05:16:00, GGRNA.v2 : RefSeq release 232 (Sep, 2025)
LOCUS XM_072434341 723 bp mRNA linear VRT 24-MAR-2025
DEFINITION PREDICTED: Eucyclogobius newberryi uncharacterized protein
(LOC140348353), mRNA.
ACCESSION XM_072434341
VERSION XM_072434341.1
DBLINK BioProject: PRJNA1237740
KEYWORDS RefSeq; includes ab initio.
SOURCE Eucyclogobius newberryi (tidewater goby)
ORGANISM Eucyclogobius newberryi
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
Acanthomorphata; Gobiaria; Gobiiformes; Gobioidei; Gobiidae;
Gobionellinae; Eucyclogobius.
COMMENT MODEL REFSEQ: This record is predicted by automated computational
analysis. This record is derived from a genomic sequence
(NW_027315735) annotated using gene prediction method: Gnomon.
Also see:
Documentation of NCBI's Annotation Process
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI RefSeq
Annotation Status :: Full annotation
Annotation Name :: GCF_026437365.1-RS_2025_03
Annotation Pipeline :: NCBI eukaryotic genome annotation
pipeline
Annotation Software Version :: 10.3
Annotation Method :: Gnomon; cmsearch; tRNAscan-SE
Features Annotated :: Gene; mRNA; CDS; ncRNA
Annotation Date :: 03/19/2025
##Genome-Annotation-Data-END##
##RefSeq-Attributes-START##
ab initio :: 35% of CDS bases
##RefSeq-Attributes-END##
FEATURES Location/Qualifiers
source 1..723
/organism="Eucyclogobius newberryi"
/mol_type="mRNA"
/isolate="DKJ021-1_F"
/db_xref="taxon:166745"
/chromosome="Unknown"
/tissue_type="fin"
/dev_stage="adult"
/lat_lon="34.03839 N 118.5831 W"
gene 1..723
/gene="LOC140348353"
/note="uncharacterized LOC140348353; Derived by automated
computational analysis using gene prediction method:
Gnomon. Supporting evidence includes similarity to: 1
Protein"
/db_xref="GeneID:140348353"
CDS 1..723
/gene="LOC140348353"
/codon_start=1
/product="uncharacterized protein"
/protein_id="XP_072290442.1"
/db_xref="GeneID:140348353"
/translation="
MYVITYVIIYVIMYVITYVIMYVIMHVITYVITYVIMYVITYVITYVIMYVITYVIMYVIMYVIIYVIMYVIMYVIMYVIMYVITYVIMYVIMYVIMYVITYVITYVITYVIMYVIMYVIMYVIMYVFIIIYVIMYVIMYVIMYVIMCVIMYVFIIIRATPSLLLFSEVKEKRGSALCVSMATLSPNVSTAFQQSRALRGSILSKHADCAMARLTPHGTRHATPHAMPHGTPHARPTARL"
ORIGIN
atgtatgttatcacgtatgttatcatatatgttattatgtatgttattacgtatgttatcatgtatgttattatgcatgttattacgtatgttattacttatgttatcatgtatgttatcacgtatgttatcacgtatgttattatgtatgttatcacgtatgttattatgtatgttattatgtatgttatcatatatgttatcatgtatgttattatgtatgttattatgtatgttatcatgtatgttattacgtatgttatcatgtatgttatcatgtatgttattatgtatgttattacgtatgttatcacgtatgttatcacgtatgttatcatgtatgttattatgtatgttatcatgtatgttattatgtatgtatttatcattatatatgttattatgtatgttattatgtatgttattatgtatgttattatgtgtgttattatgtatgtatttattattatccgagccaccccatcactgctcctgttctctgaagtgaaagagaaacgaggctccgctctctgcgtctccatggcaaccctatctcccaacgtctccacagcctttcaacagtcgagagccctccgcggcagcatcctctccaaacatgcagattgtgccatggcgaggctcacgccccacggcacgcgccacgccacgccccacgccatgccccacggcacgccccacgcacgccccacggcacgcctgtga
//
by
@meso_cacase at
DBCLS
This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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