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2025-08-29 05:35:31, GGRNA.v2 : RefSeq release 231 (Jul, 2025)

LOCUS       XM_071315981            1099 bp    mRNA    linear   INV 14-FEB-2025
DEFINITION  PREDICTED: Mytilus edulis homeobox protein araucan-like
            (LOC139522483), mRNA.
ACCESSION   XM_071315981
VERSION     XM_071315981.1
DBLINK      BioProject: PRJNA1221940
KEYWORDS    RefSeq.
SOURCE      Mytilus edulis
  ORGANISM  Mytilus edulis
            Eukaryota; Metazoa; Spiralia; Lophotrochozoa; Mollusca; Bivalvia;
            Autobranchia; Pteriomorphia; Mytilida; Mytiloidea; Mytilidae;
            Mytilinae; Mytilus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092348) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_963676685.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/12/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1099
                     /organism="Mytilus edulis"
                     /mol_type="mRNA"
                     /db_xref="taxon:6550"
                     /chromosome="5"
     gene            1..1099
                     /gene="LOC139522483"
                     /note="homeobox protein araucan-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:139522483"
     CDS             36..1004
                     /gene="LOC139522483"
                     /codon_start=1
                     /product="homeobox protein araucan-like"
                     /protein_id="XP_071172082.1"
                     /db_xref="GeneID:139522483"
                     /translation="
MSYQESFESPMVCIDRYCPKVFDPHRNAVMCRCYQAQTTSPISRMASSLPGVSPQGSPPSYLGSMPYGENQTVPQSSLHYPSYPGYAPSYDAYGMMQTIYPQMSPSISSADLSMYSGHQGIPYAQTAQMDQLLRSQVNDFWNFQQLSNQVNGNDIPATKQSSRVLKTWLREHRKNPYPTKTEKVMLAFSTRMTMTQISNWFANARRRMKQQKDKGDTSDGAISDISDDDDKSSFSKSPTSTDSLQSRTGTPCLPPPQLNFPSYIQERGELMKIHQPLIKSESVITTDSKGDNSITKPGTVTQDKCVEQPKKSKIWSMSSILS"
     misc_feature    540..656
                     /gene="LOC139522483"
                     /note="Homeobox KN domain; Region: Homeobox_KN; pfam05920"
                     /db_xref="CDD:428673"
ORIGIN      
cagcaaacatctagtacttacattaatatataaatatgtcataccaagaaagttttgaatctcctatggtttgcatagacagatattgtcccaaagtatttgatccacatagaaatgccgtcatgtgcaggtgttaccaagcacaaacaacaagtcctatttcaaggatggcttcatctttgccaggcgtctcaccacagggatcgccaccttcataccttggttccatgccgtacggagaaaaccagactgtacctcaatcctcgctacattacccatcatacccagggtacgcaccaagttatgacgcatatggaatgatgcagactatttacccacaaatgtcaccgagcatttcaagtgcagatttgtccatgtacagtggccaccaaggaattccatatgctcaaacggctcagatggaccagttgttgcgaagtcaagtcaacgatttctggaactttcaacaattgagtaatcaagtgaacggaaacgatataccggcaacaaaacagagtagcagagtattgaaaacatggttgagagaacacaggaagaacccatacccaaccaaaactgaaaaagtcatgttagccttctcaacgcgcatgactatgacacagatctctaattggttcgcgaatgcaaggcgtcgaatgaaacaacaaaaagataaaggagacacatcagatggagccatcagcgatatatcagatgatgacgataaaagcagcttcagtaaatctccgacttcaaccgatagcctacaatcgaggacaggtacaccatgtctaccaccaccacagcttaatttcccaagctacatccaagaaagaggcgagttaatgaaaatacaccaacccctgataaaaagcgaatcggtcataaccacagattcaaagggagacaattcaataacaaaacctggtactgtaactcaagataaatgtgtggagcagccgaaaaagtcaaagatatggtcaatgtccagtattttgagctagattgttaaagacttcttggttatttaattacagtgcaataagactatatgagtattcataattttgaaacgtcatatgtgatttgtctttcatga
//

by @meso_cacase at DBCLS
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If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596. [Full Text]