LOCUS       XM_071286725            2726 bp    mRNA    linear   INV 14-FEB-2025
DEFINITION  PREDICTED: Mytilus edulis homeobox protein 4-like (LOC139498346),
            mRNA.
ACCESSION   XM_071286725
VERSION     XM_071286725.1
DBLINK      BioProject: PRJNA1221940
KEYWORDS    RefSeq.
SOURCE      Mytilus edulis
  ORGANISM  Mytilus edulis
            Eukaryota; Metazoa; Spiralia; Lophotrochozoa; Mollusca; Bivalvia;
            Autobranchia; Pteriomorphia; Mytilida; Mytiloidea; Mytilidae;
            Mytilinae; Mytilus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_092355) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_963676685.1-RS_2025_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/12/2025
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2726
                     /organism="Mytilus edulis"
                     /mol_type="mRNA"
                     /db_xref="taxon:6550"
                     /chromosome="12"
     gene            1..2726
                     /gene="LOC139498346"
                     /note="homeobox protein 4-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:139498346"
     CDS             730..2664
                     /gene="LOC139498346"
                     /codon_start=1
                     /product="homeobox protein 4-like"
                     /protein_id="XP_071142826.1"
                     /db_xref="GeneID:139498346"
                     /translation="

MRKTAMDYQSFFTTPYRPQRISSSSSPYLYDGLASTPERPVFLSPSTLLQSATRPGFNTSPLYTGFQSPLGYSPSYLSPQHQHQPLDLSNSIEKLKPNRISAFSSPNDSLYLQRLKSNPMFQDLQTLLVQECLHMQVPTNLINTSWNTTPLKVPGVVDNGATVYSTHLKLQERLLSLRTDPTVTSKALELEADYSCEVGKIEVSRYQGLCSAGTSEAAREKVNSSCDEKRLFLIKEVHRHVDTLVKRLNANDSGLCNGVNSPGSRCSSRSGSDRCSPDIPSHDSGILSDESLPEFPSTNKTGSGHIFSQKPASSVDNSNANLNFQAVRHLQFNKQPVSDQCQSSPFTPITSPENITPVASPDSTHQGTSSTVLCQRETVKNGSLHMDLPNFKECQSNTKFLSDRKSFDGQNNNVNTSLQNISNAQILTEKVQEDGEVEKESAKNQKDSKNRLLTPEATVVLTNWYDAHLRYPYPSDLEVKQLSDESGLSEKQVKKWMANKRVRCFNTLSISGNQHPIKLKYKGKPKQQQNENARPNYQQLTIEARDILNQWYEGHLYDPYPSDEEKEELAEKCGISVGQIRSWFANKRSRANNTRKQIPNYFIEKFPEYTPHVHMVSIQREQARKKLKKQDSHMEFFYQNNYYM"

     misc_feature    order(2074..2076,2083..2085,2212..2214,2221..2226,
                     2233..2235)
                     /gene="LOC139498346"
                     /note="specific DNA base contacts [nucleotide binding];
                     other site"
                     /db_xref="CDD:238039"
     misc_feature    2119..2238
                     /gene="LOC139498346"
                     /note="Homeobox KN domain; Region: Homeobox_KN; pfam05920"
                     /db_xref="CDD:428673"
     misc_feature    2380..2499
                     /gene="LOC139498346"
                     /note="Homeobox KN domain; Region: Homeobox_KN; pfam05920"
                     /db_xref="CDD:428673"
ORIGIN      

gaaaaataaacattgtgaaaaatacctcaaaagtttgcagcttggaattaggaagtaatatgcttttaagatggagaaatacttataacattgattctccagagtaaggattagtgaattttcctaatggagttgagacagaaactgctcagactttaacaaatggtctttataccttagcttgcattgcattgttctaaatcatggttgttttgcaatgggagatgagaaacacatgttattctattgtcctatcaattaagtctttccaaggtaatcattagatgtttatacaacatttgtcttatccctatccattacacctgtaaaagatataggtaaacatcaaagagattagcaattaatattggccaggtagttgtttagataaggttctcatcattacagaagtatatttataattctatttgttgtaaagctcagaatatcttgtagctccccatctgctaatttttatcaaaacaaattaagtaaaaatgataattttaggtgccactgcctatccaatgagttgctcttctttgaggtgtgtacctagctagtctcatctgggtttatatactgtgaaatattgaattgtcttcattttaaaaactattatcaaagagttaacgtcatataaagctacaataatacttggcaaagtgaaagtgcatacagctatttataggacttgaaagtgaaagtaggctgtgtttttgactgttcatgagaaaaactgcaatggattatcaaagttttttcaccacaccttaccgaccacagaggatctcatcttcatcatcaccatacctttatgatggattagcatccacaccagagagaccggttttcctgtcaccatcaactctattgcagtcggcaacaagacctggttttaataccagtcctttgtatacagggtttcagtctcctctaggatattctccgtcgtatctgtctcctcagcatcaacatcaacctctggatttaagtaacagtattgaaaagttgaaaccgaatcgtatatcagcgttctcatcaccgaatgacagtctgtatttacaaagacttaaaagtaatcccatgtttcaggatctccagactttactcgtacaagaatgtctacatatgcaagtgccaactaacttaattaatacgtcttggaatactacgccgctaaaagtgccaggagtcgttgacaatggtgccacagtttactcgacgcatctaaaattgcaagaaagacttttatctctaaggaccgatccaactgtgacatcaaaagccttggaactggaggctgactatagttgtgaggtcggtaaaattgaagtgtctagatatcagggactttgttcggcaggaacttcagaggctgcaagagaaaaggtcaactcaagttgtgacgaaaaacgattatttttaattaaggaagtacacagacatgtagatacacttgtgaaaagacttaatgctaatgattctggattatgtaatggggttaatagtcccgggagtcgatgctccagccgatctggatctgataggtgttcacctgatattccaagccatgattctggtattctttctgatgaaagtttaccagagtttccatcaaccaacaaaacaggaagtggacatattttcagtcagaagccagcatcctccgttgataattcgaatgctaatttaaattttcaagcagtgagacatttacagtttaataaacagccagtttctgatcagtgccaatcatcaccatttactccgattacctcccctgaaaatatcactccagttgcttcccctgattcaacacaccaagggacatcttcaacagtattgtgtcagcgtgaaactgtgaaaaatggtagtttgcatatggacttacctaacttcaaagagtgtcagtcaaacactaaattcttatccgacagaaaatcatttgatggacaaaataacaatgtgaacacttcactccagaacatttcaaatgcacagattttgacggaaaaagttcaagaggatggtgaagttgaaaaggaatccgcaaagaatcaaaaggactctaaaaaccgtttattaacaccagaagctaccgttgttcttactaattggtatgatgcacaccttcgttatccgtatccttctgaccttgaggtcaaacaattgtccgacgagagtggactaagtgagaagcaagtgaaaaaatggatggcaaataagcgtgttaggtgttttaatacattgtcaatttctggtaaccagcatccaatcaaattaaagtataaaggaaagcctaaacagcaacagaacgaaaatgctcgtccgaattatcaacagctaactattgaagcaagggacatcttgaatcaatggtacgaggggcatctttatgatccttatccatcagacgaagagaaggaggagttagcagagaaatgtggaatatctgttggacaaattaggtcatggttcgctaataaaaggagtcgtgctaataatacacggaaacaaatcccgaactatttcattgaaaagtttccagaatacacacctcatgtgcatatggtcagtatccagagagaacaagctcgtaagaaacttaagaaacaggactctcatatggaatttttctaccagaataattattatatgtgaaattgtgaaatagaatatttgacctagtgctaaattgtacatgcagatagtttgtaaatacg

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