LOCUS       XM_070623381            3260 bp    mRNA    linear   MAM 26-DEC-2024
DEFINITION  PREDICTED: Equus przewalskii PBX/knotted 1 homeobox 2 (PKNOX2),
            transcript variant X12, mRNA.
ACCESSION   XM_070623381
VERSION     XM_070623381.1
DBLINK      BioProject: PRJNA1202102
KEYWORDS    RefSeq.
SOURCE      Equus przewalskii (Przewalski's horse)
  ORGANISM  Equus przewalskii
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_091836) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_037783145.1-RS_2024_12
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 12/23/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3260
                     /organism="Equus przewalskii"
                     /mol_type="mRNA"
                     /isolate="Varuska"
                     /db_xref="taxon:9798"
                     /chromosome="6"
                     /sex="female"
                     /tissue_type="blood"
                     /dev_stage="adult"
                     /geo_loc_name="USA: Minnesota"
                     /collection_date="2023-08-07"
     gene            1..3260
                     /gene="PKNOX2"
                     /note="PBX/knotted 1 homeobox 2; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 127
                     long SRA reads, 1 Protein"
                     /db_xref="GeneID:103557010"
     CDS             284..1267
                     /gene="PKNOX2"
                     /codon_start=1
                     /product="homeobox protein PKNOX2 isoform X5"
                     /protein_id="XP_070479482.1"
                     /db_xref="GeneID:103557010"
                     /translation="

MTATAQAPSKAQAVHISAPSAAASTPVPSAPIDPQAQLEADKRAVYRHPLFPLLTLLFEKCEQATQGSECITSASFDVDIENFVHQQEQEHKPFFSDDPELDNLMVKAIQVLRIHLLELEKVNELCKDFCNRYITCLKTKMHSDNLLRNDLGGPYSPNQPSINLHSQHPYPTEDEKRQIAAQTNLTLLQVNNWFINARRRILQPMLDASNPDPAPKAKKIKSQHRPTQRFWPNSIAAGVLQQQGGAPGTNPDGSINLDNLQSLSSDNATMAMQQAMMAAHDDSLDGTEEEDEDEMEEEEEEELEEEADELQTTNVSDLGLEHSDSLE"

     misc_feature    482..739
                     /gene="PKNOX2"
                     /note="N-terminal of Homeobox Meis and PKNOX1; Region:
                     Meis_PKNOX_N; pfam16493"
                     /db_xref="CDD:465140"
     misc_feature    776..883
                     /gene="PKNOX2"
                     /note="Homeobox KN domain; Region: Homeobox_KN; pfam05920"
                     /db_xref="CDD:428673"
     polyA_site      3260
                     /gene="PKNOX2"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      

ggggtgctccggggggcgggtccctgtgccgctgacgtcccgagcagtgctgggaagtataggctgtgttgtcacgccggtgtcagtctgatgaagattggcatcaggtgaagtctggagcaggactctgggactttttgtcctccatgccgctcaccagaaaaggaactgtgaactgtgatttggctctagctgacaggaagaatttctggcccagctggaagtgagaagagggagtgagtctctgagggccatcctagaggccgccagcatcacccggacaatgacggcaaccgctcaggcaccctccaaggcccaggctgtccacatctccgcaccctcggctgctgccagcacgcctgtgcccagtgcccccattgacccccaggcccagctggaggctgacaagagagctgtgtacaggcaccctcttttcccgctcctgacgctgctgtttgagaaatgtgaacaggccacccagggctctgagtgcatcacctccgccagctttgatgtggacatcgagaactttgtccaccagcaggagcaggagcacaaacccttcttcagcgatgacccagaactggacaatctgatggtgaaggcaatccaggtcctgagaatccacctgctggagctggagaaagtcaatgaactctgcaaggacttttgtaatcgttatatcacctgcctcaaaaccaagatgcacagcgataacctgctcaggaatgacctcggggggccgtactcccccaaccagccctccataaaccttcactcacagcacccctaccccacggaggatgagaagaggcagattgcagcccagacaaacctcaccctcctgcaagtaaataactggttcatcaatgcccggaggcgtatcctgcagcccatgcttgatgccagcaacccagaccctgcccctaaagccaagaagatcaagtcacagcaccggcccacccaaagattctggcccaactccattgccgcaggggtgctgcagcagcaaggtggcgccccggggacgaaccccgatggttccatcaacttggacaacctgcagtccctgtcctcagacaatgccaccatggctatgcagcaggctatgatggctgcacacgatgactcattggatgggacagaagaagaggatgaggatgagatggaagaggaggaggaagaggagctggaggaggaggctgacgagttgcagacgacgaatgtcagcgacctgggcttggaacacagtgactccctggagtagacgggcagcccagatggcactgatcaccgagcaggagaggagtgtcgtcaggagggcttcagggttggggggaaggggacgtgggcaggcagcaccgaggaagttgggccttagcttcccaagatcagtagcttgaagaaacgcagaggagacacctgctccctcccgaccaccaagcttcgatgagtaccccagccccacttccctagaactgcgaggactctgtctggcagagccagtcaagcagcctgtacggaaagacaggagtgagatctggactcaccaaatccctgaggacagatggcatccacggccctccaactgagggacttgagttgtttacaagccctgcactgtgaggtggatcagtgctgttggcagagtgagcctttgccaagggacagagttaggagcaaagggagagacaaaggggtttgggttttaccctcagaaggttctcagctcctttgagagacattcgagggcaagcgggagcccaaaagcatagccagtggctggaggagtgggggcacctgggcatcacatcttgcagatccgaggggggcctggattccctcaggctccggctcatcctccaaggctccactaggggtggaggcagccgtggacttgggatgggagccagcagagccgcctcctctctcccctggaaacaaacggtgagctggtgggctcagattgcaagaggttaagaggagtcccttcacctgggttggctccaggagccaaggagatggcagaacccgggctaggagccatatcaaggtgactttggggacacagccgtccttcggtggtcacagaatttagctcctgtaacaacaggacagtggtgtcttatcccaaatgtcccagccctcagatggagcccctcagatattctaccccctccattgaccagcagagagggtggaaccaggttagcttgcaacccgtccacccctcaagtccctcacggctgtccctctgctcccaggctggcttccttggcctccatcctctcttcttcattctttgcttcagagaaggcagaagaaacattggaaagaagcatccagcccagtgggaagccaggggctggagaaggtgctacatcccacctcccttcaatatccacagtgtaggggagggccccgagaaatggcacccaggagccaagtggtgccccatcccacgcgcctcgctgttctacacaccaccatcatacacagcacaggaggagctggggctcccacgagcagcagctgtccaccgtctgccccaacacacactcccagcccaactccaggccctcatgattggcgctccctcctcccttccctcccaccccatggctgtgaatgacaggactgatcacacgtgtgttttccattggatttaatttaatggacctgcagtttcatttgtaaattgtgcatcggccatctccttcagtggcaggatgtgagtggctgcctggctcaacttgaggggaccctcagggccctctggggcttcccctcctctacctggttggggtggagcaaaaggatggtcgctttcctgaggtctccctgaaatgaatgtatttctcccccaaaagagctgatatttaatgttttaatagggatttttgagaaacaaataaccttatttataatctgggtgatccaatcattttttactcccttttgatgccataggtagaggaaagtcgagcttttttggcgtgagacttttacaacgtgcagtgggataaaatacatttccttttctggttcatttttcttgttacacacacacacacacccttccacttaccactttgcacaggcgtcccaccccagcacaggcacacccgcacacacgtgcccacgtgtcctcctcccagccccctccacctgcctaatgttatgcaacctccttctgatgtatccaccaaaccagtactgaatgtggccgagttttcagtaaatcttattacctaccgtaa

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