2025-04-02 18:00:25, GGRNA.v2 : RefSeq release 228 (Jan, 2025)
LOCUS XM_070318582 2020 bp mRNA linear INV 12-DEC-2024 DEFINITION PREDICTED: Littorina saxatilis uncharacterized protein (LOC138947132), mRNA. ACCESSION XM_070318582 VERSION XM_070318582.1 DBLINK BioProject: PRJNA1148619 KEYWORDS RefSeq. SOURCE Littorina saxatilis ORGANISM Littorina saxatilis Eukaryota; Metazoa; Spiralia; Lophotrochozoa; Mollusca; Gastropoda; Caenogastropoda; Littorinimorpha; Littorinoidea; Littorinidae; Littorina. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_090245) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_037325665.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/06/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2020 /organism="Littorina saxatilis" /mol_type="mRNA" /isolate="snail1" /isolation_source="shore boulder field crab ecotype" /db_xref="taxon:31220" /tissue_type="muscle from the foot" /dev_stage="adult" /geo_loc_name="Sweden" /collection_date="2017" /linkage_group="LG1" gene 1..2020 /gene="LOC138947132" /note="uncharacterized LOC138947132; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein" /db_xref="GeneID:138947132" CDS 168..713 /gene="LOC138947132" /codon_start=1 /product="uncharacterized protein" /protein_id="XP_070174683.1" /db_xref="GeneID:138947132" /translation="
MESGDNQASSSNGEGVLADTQVVFQCESCRSILGDATNWIAATEALEAFTLSAVTESVHIGENFCHSTQTHDAGSSYSLLTCRTCKVELGRRYITTPSHLDHLRDNFTLYVTNVTSYQLGSAGVKAVSKFKGQEPPLLLKLAERCMKLQHLIVTLNERLYNIEHCLREGNGNPIATSLHSI"
polyA_site 2020 /gene="LOC138947132" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN
gggaactcgggcagctgacaactttcgcttgtgggataaacattgcacgttttcagctgatctgtaacgtggaggaaagttgtgttttggaaaagcttcagccgtcagacagaggtattctaggcgaacaagaagaagaagaagacggaggtatttataactaaaccatggagtcaggcgacaaccaagcgtcaagttccaacggagagggtgtgcttgctgacacccaggtggtctttcagtgcgagtcttgccgctccatactgggggacgccacaaactggatcgctgccactgaggccttagaggcttttacactgagtgcagtgacagaatctgtccacattggagaaaacttctgccattccactcagactcacgatgcaggcagctcctactctttgctcacctgcagaacctgcaaggtggagcttggcaggcgttacatcacaacaccgtcccatctggatcatctccgtgacaactttacgctctatgtcaccaacgtcaccagctaccagctcgggagtgcaggtgtcaaggccgtctccaagttcaaaggtcaggaaccgcctcttttgctgaagttggcggaacgctgcatgaaacttcagcatctcattgtgaccttgaacgaacgtttgtacaacattgagcattgtctccgggaaggaaacggaaaccccatagcaacgtccttgcacagcatctgagtgatagtgaccttgaacgaacgattgaacaacattgagcagtgtctccgtggcaacattcttgcacagcatctgagtgatagtggccttgaactgatgattgaataacatagagcagtgtctccatggcaacgtccttgcaaagcatctgagtgatagtgaccttgaacaaacgattgaacaacatagtacaatgtttccgtggcaacatccttgcacagcatctgagtgagtgaccttgaacgaacgattgaagcacacagagcaatgtctctgtggcaacgtccttgcacagcatctgagtgatagtgaccttgagcgaacaagtgaacaacttatagttatagcagtgtcaccgtgatgggaatgataaccccatggtaactctgcacaattgactgcatatgatgatatggtgtttgtaaagtgaatggataggttttctggcatgtgtttgtgcatgaagcacttgagcagtctctgaatttaacagtatccagattcggtgctctgtaatgtgtgtgttgtgaagaagttagcaaaagccagggttcagcctggaagtggacgtaaaaaaaataatgggtcgcttgaaaacgtcaagtataggcttgggaggggagggaggaatcttgaagcatgtctttccttttctgtccaaagaagctaagtggtgcaatatgcagccacatgagcttaggatttgtcactatatcaggttaccaaattctatgtgcatgggtgggattcttccagtatatgccggaaatccggattcgataatggcctcattttttcttcggcggcccccagacccccgggcccccctttcaggattcatgccatttttcagtcccacccatgtatgtgctcagttgtttgctcgctttagcttttctcatttcaaattcaacactgtaaactatgtatagggtggaccattggtgagaaatcttgatgggccctatgaaccactgaaaggaatattcttatgggtcattttcagatgttatgcgccattggcacattagaaaactgaaccctgaaattaaaaggtaattaagtgtagggtactctatataccatgtttatattattaagtggagttagattgttacagagggctcaggcagagtagaaatgttgcaccgttgtgtaagaaatcttggatttatattttgatcgttgcaaggatccaggagagtgcaggatgctcatgttacacaatgataatacatatagttgtttgatttgaagaatgaacctgcaaagtcattgtgttagtattacactagatcatgttcgca
//
by
@meso_cacase at
DBCLS
This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
[Full Text]