2025-04-02 17:58:29, GGRNA.v2 : RefSeq release 228 (Jan, 2025)
LOCUS XM_069247992 1847 bp mRNA linear INV 18-OCT-2024 DEFINITION PREDICTED: Argopecten irradians uncharacterized protein (LOC138307316), mRNA. ACCESSION XM_069247992 VERSION XM_069247992.1 DBLINK BioProject: PRJNA1171459 KEYWORDS RefSeq. SOURCE Argopecten irradians (bay scallop) ORGANISM Argopecten irradians Eukaryota; Metazoa; Spiralia; Lophotrochozoa; Mollusca; Bivalvia; Autobranchia; Pteriomorphia; Pectinida; Pectinoidea; Pectinidae; Argopecten. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091147) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_041381155.1-RS_2024_10 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 10/11/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..1847 /organism="Argopecten irradians" /mol_type="mRNA" /isolate="NY" /isolation_source="New York" /db_xref="taxon:31199" /chromosome="14" /tissue_type="testis" /geo_loc_name="USA: New York, Orient Harbor" /lat_lon="41.137904 N 72.315392 W" /collection_date="2021" gene 1..1847 /gene="LOC138307316" /note="uncharacterized LOC138307316; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein" /db_xref="GeneID:138307316" CDS 367..933 /gene="LOC138307316" /codon_start=1 /product="uncharacterized protein" /protein_id="XP_069104093.1" /db_xref="GeneID:138307316" /translation="
MVVQQMRPSDLRFTHDSVSCRFSDGHTLEDTFKKLLNGDLQHYQLRPLVAMSHMGHWFVVRGNRRLYLYKKLEEIGKIDEVKVVTQNFDDRVFTKQFSSKNMGVSLRIRGNPYIESELRRCINDWRDARTRPSSSASMRIYGSSYSPTYSYSTSAYSPPPQRTVPQARSYTPPPPPPPKQDDSWCTIL"
polyA_site 1847 /gene="LOC138307316" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN
tataaacacttcaggctgtgtttgtttgcttaacattatttaaacagcttcacgtaagagatgtttcttattgttttgagaatttaattttatataaagcattttacgcggggaatgctggtttacgaaggaaaaacatctattcttagtttcaaatacgaaaggaaaagatgatatagtaaacgtgtgttcaacaaatagtgtgggatacaaaaggaagagaaactacaaaaattccaagaaaatcctgcagttgttgtgactgcaaacggaaccaaaggactagacactcgattgaacgtttgacgttaaacaggtgtacactgaaagcagacatttgcataaggaactgggaccaaagagacaatggtagttcagcaaatgagaccgtcagatctacgattcacgcacgatagcgtgagttgtagattttctgatggacacacactcgaagatacttttaaaaaactgctgaatggtgatctacagcactaccaattgcgccctttggttgccatgtcccacatgggtcattggtttgtcgttagaggcaaccgacgactttacctctacaaaaaactggaagaaatagggaaaatcgatgaggttaaagttgtgacgcagaattttgacgacagagtgtttacgaaacaattctcgtcgaagaatatgggagtatcgctacgaataaggggaaatccgtacattgaatcggaacttcgtcggtgtattaacgattggagagatgccaggactcgtcccagtagcagtgcttcaatgagaatctatggatctagttatagtccaacctactcctactctacctcagcctatagtccccctccccagaggacggtcccccaggccaggtcctacaccccgcctcctcctccacctcctaaacaagatgattcctggtgtaccattctctgaagtggaatgttgttacgttggttgatgtttattcatgtgaccttgaacgtcggtaaacgtttattcatgtgaccttgaacgtcggtggacgtttattcatgtgaccttgaacgtcggtaaacgtttattcctgtgaccttgaacgttggtggacgtttattcctgtgactttcaacttagtgacaaggtcaactaagtgacaaaactgtctgtttacatatgtatgtccattgtcgatcgtacatatttttcatctatatgtaaataacattatgtgtatatatatgattcaaattgacatacatgatattgatatgttttactgaaacatttattacagcaatatgttacatacttatatgtttatctttttttttttaattttaaacatatgtacatgctattgatatagcagcatgtgaattttggttcagacgcatttttgtttgtttttaatttattgaataatatattgccttccccatagtattatagacacttatcattgatttttttttccaatttgatgacattttatattaccatcttcccagttttgttaagattaggatgtattagccacgtgtattgtgttattttaatttcaatttcatatacatgcacagttcgtatatattttataggtgcaattcgctgttcatatgccaacaatataacattttttattgaaatatatgatccattttatgtaaatacagatatattaatatattaatgataatttatcctattttagtggcacatacagtttatgattattgttaataggtacggacatgtgtaccataaaaacgaaatacattaagtcatattgacatgcattgatttctacgttgatatatcaatactttcatggctttgaaataaattgaagtagaatttacacagtttaa
//
by
@meso_cacase at
DBCLS
This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
[Full Text]