LOCUS       XM_068372157            4248 bp    mRNA    linear   INV 16-SEP-2024
DEFINITION  PREDICTED: Palaemon carinicauda uro-adherence factor A-like
            (LOC137639890), mRNA.
ACCESSION   XM_068372157
VERSION     XM_068372157.1
DBLINK      BioProject: PRJNA1159288
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Palaemon carinicauda
  ORGANISM  Palaemon carinicauda
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Crustacea;
            Multicrustacea; Malacostraca; Eumalacostraca; Eucarida; Decapoda;
            Pleocyemata; Caridea; Palaemonoidea; Palaemonidae; Palaemon.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_090725) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_036898095.1-RS_2024_09
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 09/11/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 18% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..4248
                     /organism="Palaemon carinicauda"
                     /mol_type="mRNA"
                     /isolate="YSFRI2023"
                     /isolation_source="Closed colony"
                     /db_xref="taxon:392227"
                     /chromosome="1"
                     /tissue_type="muscle"
                     /geo_loc_name="China: Rizhao, Shandong"
                     /collection_date="2020-10"
     gene            1..4248
                     /gene="LOC137639890"
                     /note="uro-adherence factor A-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:137639890"
     CDS             1..4248
                     /gene="LOC137639890"
                     /codon_start=1
                     /product="uro-adherence factor A-like"
                     /protein_id="XP_068228258.1"
                     /db_xref="GeneID:137639890"
                     /translation="

MRPLDLLPLLAALLMTASGAPAPTLRFGGSLAFNDKLDSSSSHLLDFALVTSTSTVHETSTETVTMTCYDGRRPPTCPKPGNQFFKRKRKTLRLHVGDESLRKEQGIRMPELFPSPTIVEDGEQLERILTGSLEGVIVKPRIKLWTATTVTVISTTTVTDETTTETVLTYDCSEDNVPFPPSCVVPRSSTNGGGFNEQSQGVLNDILSNEQQQLNLRDSSSQINVFGSEASKNSNTFVETPKEQLGQNNSNEEVSDGSGQHILHVFGSEASKNSNTFVETPKEQLGQSNSNEEVSDGKDNEHIISDLSKDKIVDFIAEEEDVSGQHILHVLESSHLEQNQAEQSLSLQTNSEEHVIVVSSTEFIESTGTEEEGSVKILEPNSVILGTHSTVIYNVPGGDESRDTAINESSELTQLVSSEAALRDSTILLDQEYSELSKSNLPESSSLESEKLLSNNFANLQQVDSTEPTSGPIEPSSLESNRSPNEELLEPSLISPITESPSLESPTSKLIESLQRDSFYTQPLLPTDELIEIYDPSTLEEQLSQDSSEQSLLVTKGPETELSKSSSSESSDTLPSGTTQPPILITTRPVSESAELSTLPSVESLIRDLSEQPSLVSAGPESEFFESSPSESKELLIEDSSELEFLNIEEPAKELSDLSAVESIGSLNHDSLEPTLFKSAEPAIETSELSTVESLGSQDQDLLKEQLAISTESLGDSLASSVIDSEESLGHDSIGKPLIIQAETGSESSALSALESAETIGQDLSELSLLMPSEPDSKVSGSSTLESTDLLHPDSSEHPLLIGTDPVSNTPDSSAPDSSVSLHHDSSEHQLLIATEPVNKTPESSAPDSSESLHHNAPEHPLLIATEPPSETPESSAPDFSESLHQDASEHPLLIVTEPLSETPESSAADFSESLHHDASEHPLLIATEPLSETPESSAPDFSKSLHEDPSEHPLLIATEPLSETPESSAADFSESLHQDASEHPLLIATEPPSETPESSAPDSSESLHQDASEHPLWLATEPPSETPESFAPDFSESLHQDASEHPLLIATEPLSETPKSSAPESSESLHHDASEHPLLIATEPPSETLESSAPDFSESLHQDASEHPLLIATEPLSETPKSSAPESSESLHHDASEHPLLIATEPPSETPESSAPDSIESLHHDASEHPLLIATEPPSETPESSAPDSIESLHHDASEHPLLIATEPPSETPESSAPDSIELLHHDASEHPLLIATEPLSETPKSSSADSSESLQQNSSEQSLLVATEPESNTSESPSLEPVQSLTHHDSSEHTALIAKEPENKTSESATSEATESTHRDLAKPSPLTLTGPLLEPSDCLVHDPTEAPQPAKRQVIENVIKHSPLSALPVEESQNSELIEAQNVLSIDASRRLFRSDFEGKTNLIPIHGKHQD"

     misc_feature    2635..>3663
                     /gene="LOC137639890"
                     /note="transcriptional regulator ICP4; Provisional;
                     Region: PHA03307"
                     /db_xref="CDD:223039"
ORIGIN      

atgcgtcccctagacctactgccgctgctggcagccttgctaatgacagcctccggcgcccctgccccgacgctccgcttcggagggagcttggccttcaacgacaaactggacagctcttcgtcgcacctgttggacttcgccttggtgaccagcacctcgacggtgcacgaaacgtcgacggagaccgtcaccatgacctgttacgatgggcgccgtccgccgacctgccccaaaccggggaatcagttcttcaagaggaagaggaagaccttgagactccacgtcggagacgagtccctgaggaaggagcagggcatcaggatgcctgagttgttcccaagtcctacgattgtggaggatggtgagcagctggaaaggatcttaacaggatccctggaaggtgtgatagtgaaacccagaattaagctttggacagccacaaccgttacagtcatttccacgaccacagtcacagacgaaacaacaacagagacggtgcttacctacgactgttcggaggacaacgtaccctttccaccctcttgcgtagttccaaggagcagtactaatggtgggggttttaacgagcagagccaaggagtactcaatgatatcttgtcaaatgaacaacaacaattgaaccttagggactcgagcagtcaaataaatgtttttggtagtgaagctagtaagaacagcaatacctttgtggaaactccaaaagaacagttagggcaaaataattcaaatgaagaagtttcagatgggagtggacagcatattcttcatgtttttggtagcgaagctagtaagaacagcaatacctttgtggaaactccaaaagaacagttagggcaaagtaattcaaatgaagaagtttcagatggaaaagataatgaacatattatatctgacctttctaaagataagattgtagacttcatagcagaagaggaggatgtgagtggacagcatattcttcatgtccttgaatcaagccatttagaacaaaatcaagcggaacagtcactatcattacagactaacagtgaagaacatgtaatagttgtctcatcaaccgagtttatagaatcaactggtacggaggaagaaggcagcgtaaagatattagaaccaaattccgttatcctgggaactcatagtacagtcatttataatgttcctggaggtgatgaatcaagagacacagccataaatgagtcatctgaattgactcagttggtatcctcagaagctgcattaagagattctaccattctacttgatcaggaatattcagaattatcaaagagcaacttacctgaatcttcttccttggaatcagaaaaattgttgtccaataattttgcaaatttgcaacaggtagattctactgaacctacaagtggaccaattgaaccctcttcattggagtctaatagatcgccaaatgaggagttgttagaaccatcgttaatatctccaataacagaaagtccatccttggaatcacctacatcaaaattaatagaatcactgcaaagggattctttctacacccaaccattgctacctacagatgaattaattgaaatctatgatccctccacattagaagaacaattaagccaagattcttctgagcaatctttactggtaacaaaaggaccagaaactgagctgtctaaatcatctagttcagaatcttcagatactctgccctctggtactactcagccaccaatactgataactacaagaccagtgagtgaatctgcggaattgtctactttaccttcagtagagtctttaattcgtgatttatctgaacaaccatctttggtatctgcgggaccagagagcgaattctttgaatcatctccgtcagagtccaaagaactgttaattgaggattcatctgagcttgaatttcttaatatagaagagccagcaaaggaattatctgatttatctgcagtagaatctataggatcactaaaccatgattcattagagcctacactctttaaatctgctgaaccagcaattgagacatctgaattatccactgttgaatcattaggatcccaagatcaagatttgttaaaggagcagttggctatatccacagaatccttgggtgattcattggcatcatctgtaatagattctgaggaatccttaggtcatgattcaattggaaaaccactaataatacaagcagaaacaggaagtgaatcctccgctttatctgcattagaatcagcggagacaataggacaagatttatctgaactctcactgctaatgccttcagaaccagatagtaaagtatctggatcctcaacattggagtctactgacttgctacatcccgattcatctgaacaccctttgttgataggtacagacccagtgagtaacactcctgattcatctgcaccagattcttcagtatctctacatcacgattcatctgaacaccagttgttgatagctaccgaaccagtgaacaagactcctgagtcatctgcaccagattcttcagaatcactacatcacaatgcacctgaacatccattgttgatagctactgaaccaccgagtgaaactcctgaatcatctgcgcctgatttttcagaatcactacatcaagatgcatctgaacatccattgttgatagttactgaaccactgagtgaaactcctgagtcatctgcagcagatttttcagaatcattacatcatgatgcatctgaacaccctttgttgatagctactgaaccactgagtgaaactcctgagtcatctgcaccagatttttcaaaatcacttcatgaagatccatctgaacaccctttgttgattgctactgaaccactgagtgaaactcctgagtcttctgcagcagatttttcagaatcactacatcaagatgcatctgaacaccctttgttgatagctactgaaccaccgagtgaaactcctgagtcatctgcaccagattcttcagaatcactacatcaagatgcatctgaacaccctttgtggttagctactgaaccaccgagtgaaactcctgagtcatttgcaccagatttttcagaatcactacatcaagatgcatctgaacaccctttgttgatagctactgaaccactgagtgaaactcctaagtcatctgcaccagagtcttcagaatcactacatcatgatgcatccgaacaccctttgttgatagctactgaaccaccgagtgaaactcttgagtcatctgcaccagatttttcagaatcactacatcaagatgcatctgaacaccctttgttgatagctactgaaccactgagtgaaactcctaagtcatctgcaccagagtcttcagaatcactacatcatgatgcatctgaacacccattgttgatagctactgaaccaccgagtgaaactcctgagtcatctgcaccagattctatagaatcactacatcatgatgcatctgaacacccattgttgatagctactgaaccaccgagtgaaactcctgagtcatctgcaccagattctatagaatcactacatcatgatgcatctgaacacccattgttgatagctactgaaccaccgagtgaaactcctgagtcatctgcaccagattctatagaattactacatcatgatgcatctgaacatcctttgttgatagctactgaaccactgagtgaaactcctaagtcatcttcagcagattcttcagaatccctacagcaaaattcttctgaacaatcattgctagtagctactgaaccagaaagtaacacctcagagtcaccttctctagagcctgtacaatcactaacccatcacgattcatctgaacacacagcattgatagccaaagaaccagaaaacaaaacctctgaatcagccacatcagaagctacagaatcaacacaccgtgatttagccaagccatcaccactaacattgacaggaccgctgctagaaccttctgactgtttagttcatgatccaacagaagcaccacagcctgctaagcggcaagtgatagaaaatgtgattaagcacagtccattgtctgcattacctgtagaagaatcacagaacagcgagttaatagaggcacaaaatgtgttgtctatagatgcctcacgtagactgtttagatcggattttgaaggaaaaacaaatctaattccgattcacgggaaacatcaagattaa

//