2025-07-02 19:19:48, GGRNA.v2 : RefSeq release 229 (Mar, 2025)
LOCUS XM_067108222 2707 bp mRNA linear INV 02-AUG-2024 DEFINITION PREDICTED: Macrobrachium rosenbergii uro-adherence factor A-like (LOC136841183), mRNA. ACCESSION XM_067108222 VERSION XM_067108222.1 DBLINK BioProject: PRJNA1134778 KEYWORDS RefSeq; includes ab initio. SOURCE Macrobrachium rosenbergii (giant freshwater prawn) ORGANISM Macrobrachium rosenbergii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Crustacea; Multicrustacea; Malacostraca; Eumalacostraca; Eucarida; Decapoda; Pleocyemata; Caridea; Palaemonoidea; Palaemonidae; Macrobrachium. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_089748) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_040412425.1-RS_2024_07 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 07/17/2024 ##Genome-Annotation-Data-END## ##RefSeq-Attributes-START## ab initio :: 55% of CDS bases ##RefSeq-Attributes-END## FEATURES Location/Qualifiers source 1..2707 /organism="Macrobrachium rosenbergii" /mol_type="mRNA" /isolate="ZJJX-2024" /db_xref="taxon:79674" /chromosome="8" /sex="male" /tissue_type="whole blood" /geo_loc_name="China: ZheJiang province, Jiaxing city" /collection_date="2023-10-10" gene 1..2707 /gene="LOC136841183" /note="uro-adherence factor A-like; Derived by automated computational analysis using gene prediction method: Gnomon." /db_xref="GeneID:136841183" CDS 62..2707 /gene="LOC136841183" /codon_start=1 /product="uro-adherence factor A-like" /protein_id="XP_066964323.1" /db_xref="GeneID:136841183" /translation="
MELLSVVAVANRYPKKMKLVDLLLLLAAVLMTASAAPTLRIGGSIGFHRNSETSSRKLLDFAFITNTLTVYNTTTETAYMSCYLGAAEPTCPTQVAQTFKRRRRALRIHVGDESLRQAQGTRMPELFPSPLGREGDEPLEKSLTGSLEAIIEKPKIKLWTDTTVTKLLTSTITDTSITQTVTTYYCSVGSSTPYPPRCNNPIRFTILSRSDEGVSNEQAGEDISVLEEGIESLSDKDIQVEKLKSGENDKLSNSQDSDANHKFEEIPKGQPEQSDLNEEVLGEKDNEHIISDISEDETLEINEGNGEQQNSNDALSLQTSNEAPATLAPLDKLSESTDGEREENTEILEPSVINRQPEELIHRDAALTESSKLSQLVPSETALRDSTLSHDQELEESATFESSLPLLISPVTQSPSLESPTLESIESLKQDSFDDQLSVSTGLDTEFSNPLTAESKEPLSLDSSKQSLQASEDPESESSESSTAESPDALQSETSEPKLPTNIRPESEPAESSTLHSAELFNQDLSEQPSFVPVVPESESFESSTSEFKELPDQISFAPEILLPAEVIRESSDLSTLENTESLIHDPLEPEFLRPAEEAAQSSELESVKSQGPGSFEEQLVLSTESKESLDQDSFETPPKIPTEIVSESSSALESAQSLKQNSSEHLVVIASETESKISESPLLEPIVSLNHDSFEHPLLIVAEPEIKTPGSSASESTESPSPEFFERPLQVATEPESTTTETLSLQSSESLDPNSSEHPLQAASEPEIKKSESPLQEPAESLHHDSSEHPLSIATEPEGTTAESSESEDLERTQLDSSDPIPSDSSALESTEVPQPGKPQLTENVILHTSSSVLHSEEPQHLLSTEATGASSKISTVHQI"
ORIGIN
ggcggggctggggaacacgcgccctccccatataagcgccagagggagaggacgcgcctgcatggagctcttgtccgtcgtagcagtcgccaatcgttacccaaagaagatgaagctggtagacctgctgctattgttggcagctgtgctgatgaccgcgtccgctgcaccaaccctgcgcatcggcgggagcattgggttccatagaaattcagaaacttcctcccgaaaactgctggattttgcattcataacgaatactttaactgtgtataacaccacgacagagacggcctacatgtcttgttacctcggagccgcagagcctacgtgtccaacgcaggtggcgcagaccttcaagaggaggagaagggcgttaagaatccatgttggagacgagtcactgagacaagcacaaggcaccaggatgcctgaattgttcccgagtcccttgggtagagaaggtgatgagcctctggaaaagagcctaacaggatccctagaagctatcatagaaaagccaaaaattaagttgtggacagacacaactgttacaaaacttctcacttccaccatcacagacacatcgataacacagacagtgactacctattattgctcagtgggttctagtactccttatccaccccgctgcaataatcccataaggtttacgatactaagcagatcagatgaaggagtttcaaacgagcaagctggagaagatatctcggttttggaagagggcatagaaagcctgtcggacaaggatatccaggtggagaaactgaaatcaggcgaaaacgacaaactttcaaatagccaagatagtgacgctaaccataagtttgaggaaattccaaaaggacagccagagcaaagtgacttgaatgaagaagtgttaggcgagaaagacaatgaacacattatatccgatatctctgaagatgaaactttagaaatcaatgaaggtaatggtgaacagcaaaactctaatgatgccctgtcattacagacaagtaatgaagctcctgcaacgctggcgccattagataaacttagtgaatcaactgatggggagagagaagaaaatacagaaatattagaaccaagtgtaattaacagacaaccagaagaattaattcatagagatgcagcactgactgagtcatctaaattgtctcagctggtgccgtcagagacagcattaagagactctactctctcacatgatcaggagcttgaagaatcagcaacatttgaatcatctctcccattgttgatatctccagtaacacaaagtccgtccttggaatcacccacattagaatccatagaatcactgaaacaagattcttttgatgaccaactctcggtatctaccgggctagatactgaattttctaatccacttacagcagaatccaaagaaccattatctcttgattcatctaagcaatcattgcaagcatcagaagatccagagagtgagtcgtctgaatcctccactgcagaatctccagatgctttgcagtctgagacttctgagccaaaactacccacaaacataagaccagaaagtgaaccagctgagtcatctactttgcattctgcagaactgttcaatcaggatttatctgagcaaccatcatttgtacctgtagtaccagaaagcgaatcctttgaatcatctacatcagagttcaaagaactgcccgatcagatttcatttgctcccgaaatccttttaccagcagaagtaataagggaatcgtctgatttatctacattagaaaatacagaatcactaattcatgatccactagagcctgaattccttaggcctgcagaagaggcagctcagtcctctgaattagaatccgtgaagtcacaagggccaggttcgtttgaggaacagttggtgttatctacagaatctaaagaatccttagatcaagattcatttgaaacaccaccaaagataccaaccgaaattgttagtgaatcttcatctgcgttagaatcggcacagtcactaaaacaaaattcatctgagcaccttgtggttatagcttcagaaacagagagtaaaatatctgaatctcctttattagaaccaatagtatcgctaaatcatgattcatttgaacacccgttgctaatagttgctgaaccagagattaaaactcctggatcatctgcatcagaatctactgaatcaccaagtccagagttttttgaacgcccgttgcaagtagctactgaaccagagagtacaactactgaaacactttcattgcaatcttcagaatcattagatccaaattcatctgaacacccgttgcaagcagctagtgaacctgagattaaaaagtctgagtctccgctacaagaacctgcagaatcccttcatcacgattcatctgaacacccactgtcaatagctactgagccagagggtacaactgcggaatcatctgaatcagaagatctagaacgaacacaactcgattcatctgacccaataccttccgattcatcagcgctggagtcaacagaagtaccacagcctggtaagccacaactgacagaaaatgtaattttgcacacgtcatcgtctgtattacattcagaagaacctcagcatttgctgtctacagaagccacaggggcatcaagtaaaatatctacagtacatcagatttag
//
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@meso_cacase at
DBCLS
This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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