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2025-04-03 08:28:00, GGRNA.v2 : RefSeq release 228 (Jan, 2025)

LOCUS       XM_066598229            1191 bp    mRNA    linear   VRT 22-JUL-2024
DEFINITION  PREDICTED: Eleutherodactylus coqui dynein heavy chain-like
            (LOC136624001), mRNA.
ACCESSION   XM_066598229
VERSION     XM_066598229.1
DBLINK      BioProject: PRJNA1136876
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Eleutherodactylus coqui (Puerto Rican coqui)
  ORGANISM  Eleutherodactylus coqui
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Amphibia; Batrachia; Anura; Neobatrachia; Hyloidea;
            Eleutherodactylidae; Eleutherodactylinae; Eleutherodactylus;
            Eleutherodactylus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_089837) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_035609145.1-RS_2024_07
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 07/19/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1191
                     /organism="Eleutherodactylus coqui"
                     /mol_type="mRNA"
                     /strain="aEleCoq1"
                     /db_xref="taxon:57060"
                     /chromosome="1"
                     /sex="male"
                     /tissue_type="whole body"
                     /dev_stage="adult"
                     /geo_loc_name="USA: Hawaii"
                     /lat_lon="19.580062 N 154.923937 W"
                     /collection_date="2018-07-06"
                     /collected_by="Mara Laslo"
     gene            1..1191
                     /gene="LOC136624001"
                     /note="dynein heavy chain-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:136624001"
     CDS             1..1191
                     /gene="LOC136624001"
                     /codon_start=1
                     /product="dynein heavy chain-like"
                     /protein_id="XP_066454326.1"
                     /db_xref="GeneID:136624001"
                     /translation="
MQYDVDGVQLYGVQHGVVIMQYDVVIMQYGVVIMQYGVVIMQYDVVIMQYCVVIMQYGVVIMQCGVVIMQCGVVIMQYGVVIMQYGVVIMQYDVVIMQYDVVIMQYGVVIMQYGVVIMQYGVVIMQCGVVIMQYGVVIMQYGVIIMQYDVVIMQYDVVIMQYGVIMQYGVVIMQYGVVIMQYGVVIMQYDVVIMQYGVVIMQYGVVIMQYDVVIMQYGVVIMQYGVVIMQYDVVIMQYDVVIMQYGVVIMQYDVVIMQYGVVIMQYGVVIMQYDVVIMQYGVVIMQYGVVIMQYGVVIMQYDVVIMQYDVVIMQYGVVIMQYDVVIMQYGVVIMQYGVVIMQYDVVIMQYGVVIMQYGVVIMQYGVVIMQYDVVIMQYDVVIMQCGVVIMQHRKYQ"
ORIGIN      
atgcaatatgatgttgatggtgtgcagttatatggtgtgcagcatggtgttgttattatgcagtatgatgttgttattatgcagtatggtgttgttattatgcagtatggtgttgttattatgcagtatgatgttgttattatgcagtattgtgttgttattatgcagtatggtgttgttattatgcagtgtggtgttgttattatgcagtgtggtgttgttattatgcagtatggtgttgttattatgcagtatggtgttgttattatgcagtatgatgttgttattatgcagtatgatgttgttattatgcagtatggtgttgttattatgcagtatggtgttgttattatgcagtatggtgttgttattatgcagtgtggtgttgttattatgcagtatggtgttgttattatgcagtatggtgttattattatgcagtatgatgttgttattatgcagtatgatgttgttattatgcagtatggtgttattatgcagtatggtgttgttattatgcagtatggtgttgttattatgcagtatggtgttgttattatgcagtatgatgttgttattatgcagtatggtgttgttattatgcagtatggtgttgttattatgcagtatgatgttgttattatgcagtatggtgttgttattatgcagtatggtgttgttattatgcagtatgatgttgttattatgcagtatgatgttgttattatgcagtatggtgttgttattatgcagtatgatgttgttattatgcagtatggtgttgttattatgcagtatggtgttgttattatgcagtatgatgttgttattatgcagtatggtgttgttattatgcagtatggtgttgttattatgcagtatggtgttgttattatgcagtatgatgttgttattatgcagtatgatgttgttattatgcagtatggtgttgttattatgcagtatgatgttgttattatgcagtatggtgttgttattatgcagtatggtgttgttattatgcagtatgatgttgttattatgcagtatggtgttgttattatgcagtatggtgttgttattatgcagtatggtgttgttattatgcagtatgatgttgttattatgcagtatgatgttgttattatgcagtgtggtgttgttattatgcaacacaggaaatatcagtaa
//

by @meso_cacase at DBCLS
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If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596. [Full Text]