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Previous release (v1)
2025-12-08 09:58:51, GGRNA.v2 : RefSeq release 232 (Sep, 2025)
LOCUS XM_066366411 1506 bp mRNA linear MAM 10-JUL-2024
DEFINITION PREDICTED: Saccopteryx leptura homeobox B8 (HOXB8), transcript
variant X2, mRNA.
ACCESSION XM_066366411
VERSION XM_066366411.1
DBLINK BioProject: PRJNA1130902
KEYWORDS RefSeq.
SOURCE Saccopteryx leptura (lesser sac-winged bat)
ORGANISM Saccopteryx leptura
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yangochiroptera;
Emballonuridae; Emballonurinae; Saccopteryx.
COMMENT MODEL REFSEQ: This record is predicted by automated computational
analysis. This record is derived from a genomic sequence
(NC_089504) annotated using gene prediction method: Gnomon.
Also see:
Documentation of NCBI's Annotation Process
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI RefSeq
Annotation Status :: Full annotation
Annotation Name :: GCF_036850995.1-RS_2024_07
Annotation Pipeline :: NCBI eukaryotic genome annotation
pipeline
Annotation Software Version :: 10.3
Annotation Method :: Gnomon; cmsearch; tRNAscan-SE
Features Annotated :: Gene; mRNA; CDS; ncRNA
Annotation Date :: 07/09/2024
##Genome-Annotation-Data-END##
FEATURES Location/Qualifiers
source 1..1506
/organism="Saccopteryx leptura"
/mol_type="mRNA"
/isolate="mSacLep1"
/db_xref="taxon:249018"
/chromosome="2"
/sex="male"
/tissue_type="liver"
/dev_stage="adult"
/geo_loc_name="Panama: Gamboa Approx"
/lat_lon="9.07091 N 79.42076 W"
/collection_date="2019-03-18"
/collected_by="Alvarez van Tussenbroek"
gene 1..1506
/gene="HOXB8"
/note="homeobox B8; Derived by automated computational
analysis using gene prediction method: Gnomon. Supporting
evidence includes similarity to: 4 Proteins"
/db_xref="GeneID:136393761"
CDS 31..759
/gene="HOXB8"
/codon_start=1
/product="homeobox protein Hox-B8 isoform X2"
/protein_id="XP_066222508.1"
/db_xref="GeneID:136393761"
/translation="
MSSYFVNSLFSKYKAGESLRPNYYDCGFAQELGGRPTVVYGPGGGGGFQHPSQIQDFYHGPSALPTAPYQQNPCAVACHGEPGNFYGYDPLQRQSLFGAQDADLVQYADCKLAAAGGLAEEAEGSEQSPSPTQLFPWMRPQAAGRRRGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKKENNKDKFPSSKCEQEELEKQKLERAPEAVDEGDAQKGDKK"
misc_feature 466..636
/gene="HOXB8"
/note="Region: Homeodomain; pfam00046"
/db_xref="CDD:459649"
ORIGIN
gccgccgccgccgcctccaaattcaataaaatgagctcttatttcgtcaactcactgttctccaaatacaaagccggggagtccctgcgccccaattactatgactgcggcttcgcccaggagctgggcggccgacccaccgtggtgtacgggcccggcggcggcggcggcttccagcacccgtcgcagatccaggacttctaccacgggccgtcggcgctgcccacggcgccctaccagcagaacccgtgcgccgtggcgtgccacggggagcccggcaacttctacggctacgaccctctgcagcgccagagcctgttcggcgcgcaggacgcggacctggtgcagtacgccgactgcaagctcgcggccgccggcggcctggccgaggaggccgagggctcggagcagagcccgtcgcccacgcagctcttcccctggatgcgcccgcaagccgccggacgcaggcgaggccgacagacctacagccgctaccagaccctggagctggagaaggagttcctatttaatccctatctgactcgcaagcggcggatcgaggtatcgcatgcgctgggactgacagagagacaggtcaaaatctggttccagaaccggaggatgaagtggaaaaaagaaaacaacaaagacaagttccccagcagcaaatgtgagcaggaggagctggagaaacagaagctggagcgggccccggaggcggtggacgagggcgacgcgcagaagggcgacaagaagtaggctgtgactgggaccgccagggccgcggccgtcttcgtccgctggtctcccgaccgctccgccgccgtccgtccccgcccgagagagctctggtcccgcgagcgggcccgaagcttggcctcccgccgcagcgtccccaccgcgccagtccccgctagtggtagtatctcgtaatagcttctgtgtgtgagctaccgtggatttccttcccttctcttggggtccgggggagaaagacaaggattgtgagcaaggactccctcgcccagcgagggtgagcggctgcggcttggctgagactccctccccacgcccccgccccgtgtaaaaagcctccttgtgcaatggtctcttttcctttgaacgtgcttctttgtaatgaccgaggtacagatttctgctaagttctcccaacaacatgaaactgcctattcacaccgtaattctttctgtctccctcgccttctctctctctctctctctctctctctctctctctctctctctctctcgttctcctccttcctcatttcctcctctcacccctctgtcctcgctgccgtccttagctcgctggctttctctcttgcttctctcttttcctcaccactcccctttggtttgacaatttcgtcttaagtgtttctcaaaagaggttactttagttagcatgcgcgctgtgggcaattgttaaaagtgttcttaggtttactgtgaagagaatgtatcctgtatccgtgaattgct
//
by
@meso_cacase at
DBCLS
This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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