GGRNA ver.2 Home | Help | Advanced search    Previous release (v1)

2025-07-02 19:18:52, GGRNA.v2 : RefSeq release 229 (Mar, 2025)

LOCUS       XM_065997032             910 bp    mRNA    linear   PLN 24-JUN-2024
DEFINITION  PREDICTED: Euphorbia lathyris uncharacterized protein
            (LOC136206105), transcript variant X2, mRNA.
ACCESSION   XM_065997032
VERSION     XM_065997032.1
DBLINK      BioProject: PRJNA1119998
KEYWORDS    RefSeq.
SOURCE      Euphorbia lathyris
  ORGANISM  Euphorbia lathyris
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae;
            Euphorbioideae; Euphorbieae; Euphorbia; Euphorbia subgen. Esula;
            Euphorbia sect. Lathyris.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_088918) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_963576675.1-RS_2024_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..910
                     /organism="Euphorbia lathyris"
                     /mol_type="mRNA"
                     /db_xref="taxon:212925"
                     /chromosome="9"
     gene            1..910
                     /gene="LOC136206105"
                     /note="uncharacterized LOC136206105; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 6
                     Proteins"
                     /db_xref="GeneID:136206105"
     CDS             157..771
                     /gene="LOC136206105"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_065853104.1"
                     /db_xref="GeneID:136206105"
                     /translation="
MPAAELYSEHPLFGGAIANTFPRRFQDVSNIRQVPDHQEAFTDPARDESLIFELLEFKNEVGDTGSAAWFLQDLANEQNAEGCTLLEQSGVVEAPGLTYRNIPAVITTAIGQMAISKGRQGREAQNIVRVYLANIRLRGVGTDVLITGYEPLLINPLSESANTVGAGLAVPATQSGFLPMIEVFKLAVSSFKVHDWNLFGSAAA"
     polyA_site      910
                     /gene="LOC136206105"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
tgctttcttttgaggcagaaagaagcttcgatactaagcagagcgagtaaccggcgtcttcataaaccccctataaatacagtacaccgattattcactgtacacttctctctcgctcgttaatttcagaattcctctctcatttatctggtgaatatgccggcggccgaattgtactcggagcaccctttatttggtggtgcaattgctaacaccttcccccggagattccaggatgtcagcaatattcgccaagttcctgatcatcaggaggcatttactgaccctgcacgtgatgaaagcttgatctttgagcttttagaatttaagaatgaagtaggagatactggaagtgctgcctggtttctgcaagatcttgctaatgaacaaaacgctgagggatgcacgttgcttgagcagtcaggagtagttgaggcccctggtttgacttacaggaacatccctgctgtcattactactgctattggccaaatggcaatttcaaagggacgacaagggagggaagcacaaaatattgtgagggtttatttggctaacatacgtcttagaggagttggcacagatgtgctcataactggatatgaaccactattaataaaccctttaagtgaaagtgcaaacacagttggtgccgggctagctgttccagccacacaatctggattcctcccaatgattgaggtctttaagctcgcagtatcttccttcaaagtgcatgactggaatctttttggcagtgctgcagcctaaaagaggaccaatgtaatttttaaatctagatatgacaatttgacattaattctttcttctttctagattttaggtccgaattcttttgagtttattttagtttcgaatccaaataaaatctttaaccagataacagata
//

by @meso_cacase at DBCLS
This page is licensed under a Creative Commons Attribution 4.0 International License (CC BY 4.0).

If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596. [Full Text]