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Previous release (v1)
2025-10-28 05:55:17, GGRNA.v2 : RefSeq release 232 (Sep, 2025)
LOCUS XM_065533277 6630 bp mRNA linear PRI 16-MAY-2025
DEFINITION PREDICTED: Macaca fascicularis ATPase copper transporting beta
(ATP7B), transcript variant X14, mRNA.
ACCESSION XM_065533277
VERSION XM_065533277.2
DBLINK BioProject: PRJNA1105996
KEYWORDS RefSeq.
SOURCE Macaca fascicularis (crab-eating macaque)
ORGANISM Macaca fascicularis
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Cercopithecidae; Cercopithecinae; Macaca.
COMMENT MODEL REFSEQ: This record is predicted by automated computational
analysis. This record is derived from a genomic sequence
(NC_088391) annotated using gene prediction method: Gnomon.
Also see:
Documentation of NCBI's Annotation Process
On May 16, 2025 this sequence version replaced XM_065533277.1.
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI RefSeq
Annotation Status :: Full annotation
Annotation Name :: GCF_037993035.2-RS_2025_03
Annotation Pipeline :: NCBI eukaryotic genome annotation
pipeline
Annotation Software Version :: 10.3
Annotation Method :: Best-placed RefSeq; Gnomon;
cmsearch; tRNAscan-SE
Features Annotated :: Gene; mRNA; CDS; ncRNA
Annotation Date :: 03/31/2025
##Genome-Annotation-Data-END##
FEATURES Location/Qualifiers
source 1..6630
/organism="Macaca fascicularis"
/mol_type="mRNA"
/isolate="582-1"
/db_xref="taxon:9541"
/chromosome="17"
/sex="female"
/tissue_type="parthenogenetic embryonic stem cells"
gene 1..6630
/gene="ATP7B"
/note="ATPase copper transporting beta; Derived by
automated computational analysis using gene prediction
method: Gnomon. Supporting evidence includes similarity
to: 907 long SRA reads, 2 Proteins"
/db_xref="GeneID:101866907"
CDS 149..4585
/gene="ATP7B"
/codon_start=1
/product="copper-transporting ATPase 2 isoform X9"
/protein_id="XP_065389349.1"
/db_xref="GeneID:101866907"
/translation="
MKKSFAFDNVGYEGGLDGLGPSSQVDTSTIRILGMTCQSCVKSIENRISSLKGIVSMKVSLEQGSATVKYVPSVVSLQQVCHQIGDMGFEASIAEGKAASWPSRSLPAQEAVVKLRVEGMTCQSCVGSIEGKVRKLQGVVRVKVSLSNQEAVITYQPYLIQPEDLRDHVNDMGFEAAIKNKVAPLSLGPIDIERLESTNPKRPLSSANQNFNNSETLGHQGRNVVTLQLRIDGMHCKSCVLNIEENIGQLLGVQSIQVSLENKTAQVQYDPSRTSPVALQTAIEALPPGNFKVSLPDGAEGSGTDHRSSSSHSPGSSPRNQVQSTCSTTLIAIAGMTCASCVHTIEGMISQLEGVQQISVSLAEGIGTVLYNPSVISPEELRAAIEDMGFEASVVSENCSTSPLGNHSAGNSMVQTTGGTPTSVQEVALHAGSLPTNHLPDIWAKSPQSTRAVAPQKCFLQIKGMTCASCVSNIERNLQKEAGPVSPWRSCPPRVLQVMCHPGGPAHPECYSRDLMVPGVLSVLVALMAGKAEVKYDPEVIQPLEIAQLIQDLGFEAAVMEDSAGSDGNIELTITGMTCASCVHNIESKLTRTNGITYASVALATSKALVKFDPEIIGPRDIIKIIEEIGFHASLAQRIPNAHHLDHKMEIKQWKKSFLCSLVFGIPVMALMIYMLIPSNQPHQSMVLDRNIIPGLSILNLIFFILCTFVQVLGGWYFYVQAYKSLRHRSANMDVLIVLATSIAYVYSLVILVVAVAEKAERSPVTFFDTPPMLFVFIALGRWLEHLAKSKTSEALAKLMSLQATEATVVTLGEDNLIIREEQVPMELVQRGDIVKVVPGGKFPVDGKVLEGNTMADESLITGEAMPVTKKPGSTVIAGSINAHGSVLIKATHVGNDTTLAQIVKLVEEAQMSKAPIQQLADRFSGYFVPLIIIMSTLTLVVWIVIGFIDFGVVQKYFPNPNKHISQTEVIIRFAFQTSITVLCIACPCSLGLATPTAVMVGTGVAAQNGILIKGGKPLEMAHKIKTVMFDKTGTITHGVPRVMRVLLLGDVATLPLRKVLAVVGTAEASSEHPLGVAVTKYCKEELGTETLGYCTDFQAVPGCGIGCKVSNVEGILAHSARPLSAPASHLNEAGNLPAEKDAAPQTFSVLIGNREWLRRNGLTISSDVSDAMTDHEMKGQTAILVAIDAADAGWFTPGVLCGMIAIADAVKQEAALAVHTLQSMGVDVVLITGDNRKTARAIATQVGINKVFAEVLPSHKVAKVQELQNEGKRVAMVGDGVNDSPALAQADMGVAIGTGTDVAIEAADVVLIRNDLLDVVASIHLSKRIVRRIRINLVLALIYNLVGIPIAAGVFMPIGIVLQPWMGSAAMAASSVSVVLSSLQLKCYKKPDLERYEAQAHGHMKPLTASQVSVHIGMDDRRRDSPRATPWDQVSYVSQVSLSSLTSDKPSRHSTAADDGGDKWSLLLNDRDEEQYI"
polyA_site 6630
/gene="ATP7B"
/experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN
ttagtgaccccttgctggtacattctgctgtgaagaataccacggagagacagagagaccattttaccctgatctcaattccacacacacttggtggcaggagatcttatctaagctttctttgcctacccgtgcctgggaaccagcaatgaagaagagttttgcttttgacaatgttggctacgaaggtggtctggatggcctgggcccttcttctcaggtggacaccagcacaatcaggatcttgggcatgacttgccagtcatgtgtgaagtccattgagaacagaatttccagtttgaaaggcatcgtgagcatgaaggtttccctggaacaaggcagtgccactgtgaaatatgtgccatcagttgtgagcctgcaacaggtttgccatcaaattggggacatgggcttcgaggccagcattgcagaaggaaaggcagcctcctggccctcaaggtccttgcctgcccaggaggctgtggtcaagctccgggtggagggcatgacctgccagtcctgtgtcggctccattgaaggcaaggtccggaaactgcaaggagtagtgagagtcaaagtctcactcagcaaccaagaggctgtcatcacttatcagccttatctcattcagcctgaagacctcagggaccatgtaaatgacatgggatttgaagctgccatcaagaacaaagtggctcccttaagcctgggaccaattgatattgagcggttagaaagcactaacccaaagagacctttatcttctgctaaccagaattttaataattctgagaccttgggacaccaaggaaggaatgtggtcaccctccaactgagaatagatggaatgcactgtaagtcttgtgtcttgaatattgaagaaaatattggccaactcctaggggttcaaagtattcaagtgtccttagagaacaaaactgcccaagtacagtatgacccttctcgtaccagcccagtggctctgcagacggctatcgaggcacttccacctgggaactttaaagtttctcttcctgatggagccgaagggagtgggacagatcacaggtcttccagttctcattcccctggctcctccccaagaaaccaggtgcagagcacatgcagtaccactctgattgccattgccggcatgacctgtgcatcctgtgtccataccattgaaggcatgatctcccaactggaaggggtgcagcaaatatcggtgtctttggccgaagggattggaacagttctttataatccctctgtaattagcccagaagaactcagagctgctatagaagacatgggatttgaggcttcagtcgtttctgaaaactgttctactagccctcttggaaaccacagtgctgggaattccatggtgcaaactacaggtggtacacctacatctgtgcaggaagtggctctccacgctgggagtctccctacaaaccatctcccggacatctgggcaaagtccccacaatcaaccagagcagtggcaccgcagaagtgcttcttacagatcaaaggcatgacctgtgcgtcctgtgtgtccaacatagaaaggaatctgcagaaggaagctggtcctgtgtcaccctggaggtcctgcccacccagagtgttacaggttatgtgtcaccctggaggtcctgcccacccagagtgttacagccgtgacctgatggttccaggtgttctctccgtgttggttgccttgatggcaggaaaggcagaggtcaaatatgacccggaggtcattcagccgctcgagatagctcagttgatccaggacctgggctttgaggcagcagtcatggaggactccgcaggctccgatggcaacattgagctgacaatcacagggatgacctgcgcgtcctgtgtccacaacatagagtccaaactcacgaggacgaatggcatcacttatgcctccgttgcccttgccaccagcaaagcccttgttaagtttgacccggaaattatcggtccacgggatattatcaaaattattgaggaaattggctttcatgcatccctggcccagagaatccccaacgctcatcacttggaccacaagatggaaataaagcagtggaagaagtctttcctgtgcagcctggtgtttggcatccctgtcatggctttaatgatctatatgctgatacccagcaaccagccccaccagtctatggtcctggaccgcaacatcattccaggactgtccattctaaatctcatcttctttatcttgtgcacctttgtccaggtcctcggcgggtggtacttctacgttcaggcctacaaatctctgagacacaggtcagccaacatggacgtgctcatcgtcctggccacgagcattgcttacgtctattctctggtcatcctggtggttgctgtggctgagaaggcggagaggagccctgtgacattcttcgacacgccccccatgctcttcgtgttcattgccctggggcggtggctggaacacttggcaaagagcaaaacctcagaagccctggccaaactcatgtctctccaagccacagaagccaccgttgtgacccttggtgaggacaatttaatcatcagggaggagcaagtccccatggagctggtgcagcggggcgatatcgtcaaggtggtccctgggggaaagttcccagtggacgggaaagtcctggaaggcaataccatggctgatgagtccctcatcacaggagaagccatgccagtcactaagaaacccggaagcactgtaattgcggggtctataaatgcacatggctctgtgctcattaaagccacccatgtaggcaatgacaccactttggctcagattgtgaaactggtggaagaggctcagatgtcaaaggcccccattcagcaactggctgaccggtttagtggatattttgtcccacttatcatcatcatgtcaactttgacgttggtggtatggattgtaatcggttttatcgattttggtgttgttcagaagtactttcctaaccccaacaagcacatctcccagacagaggtgatcatccggtttgcattccagacgtccatcacggtgctgtgcattgcctgcccctgctccctggggctggccacgcccacggccgtcatggtgggcactggggtggccgcgcagaatggcatcctcatcaagggaggcaagcccctggagatggcgcacaagataaagactgtgatgtttgacaagactggcaccattacccatggggtccccagggtcatgcgagtgctcctactgggggatgtggccaccctgcccctcaggaaggttctggctgtggtggggactgcggaggccagcagcgaacaccccttgggcgtggcagtcaccaaatactgtaaagaggaacttggaacagagactttgggatactgcacggacttccaggcggtgccaggctgtggaattgggtgcaaagtcagcaacgtggaaggcatcctggcccacagtgcgcgccctttgagtgcacctgccagtcacctgaatgaggctggcaaccttcccgcagaaaaagatgcagccccccagaccttctctgtgctgattggaaaccgtgaatggctgaggcgcaacggcttaaccatttccagtgacgtcagtgacgctatgacagaccacgagatgaaaggacagacagccatcctggtggctattgacgctgctgatgccggctggttcactccaggtgtgctctgtgggatgattgctatcgcagacgctgtcaagcaggaggccgccctggctgtgcacacgctgcaaagcatgggtgtggacgtggttctgatcaccggggacaaccggaagacagccagagccattgccacccaggttggcatcaacaaagtctttgcagaggtgctgccttcgcacaaagtggccaaggtccaggagctccagaatgaagggaagagagtcgccatggtgggggatggggtcaatgactccccagccttggctcaggcagacatgggtgtcgccattggcaccggcacggatgtggccatcgaggcagccgacgtcgtcctcatcagaaatgatttgctggatgtggtggctagcattcacctttccaagaggattgtccggaggatacgcatcaacctggtcctggcactgatttataacctggttgggatacccattgcggcaggtgtcttcatgcccatcggcattgtgctgcagccctggatgggctcagcggccatggccgcctcctctgtgtctgtggtgctgtcatccctgcagctcaagtgctataagaagcctgacctggagaggtatgaggcacaggcgcatggccacatgaagcccctgacagcatcccaggtcagtgtgcacatcggcatggatgacaggcggcgggactcccccagggccacaccatgggaccaggtcagctatgtcagccaggtgtcgctgtcctccctgacatccgacaagccatctcggcacagcactgcagcggacgatggtggggacaagtggtctctgctcctgaatgacagggatgaggagcagtacatctgatggcaccaggcaggcgtgccagggcagggccttgcctccactcgccacaagctgagcaggacagccagcagcaggatgggctgagctagcctccagctttggggacttccactccctggatatgtccagtcatcctgccctgcagcacgtggtcttgtctgagtgcaactggccttaccctagagaggacggcctggcctgcctcttggcgtcactgaaccgtcaggatgggctttgtcttggactctagtccttggctgtactgtagaaggtgagaggcgagtcaccctcctcacaaacctctgcttggagtatttaggatgactgctataaaatggagaacagtttcatcaggaccaaaaaacctcactgggcctttccagagaacggcagacctcactgtcaggctctttctgatgacgcctgtctgtgtgcatcatgtttctgagaccacagtttacctcaggtgtgcctgctgctttcttcctgcacagtccgttccttttctcttctgtgtgcttgtctgtggggaccccttggaaccctgcctgtctcctaggagggcgagaccaatgtctttgtggtccttgctgctgctctcaggcgcttctccagtgctctggagtgtgcatttcagcttgaacctgcttcctggctcgcacatccccagccagggagcttgccacaccattcttcaggtccaggagagttctttttttgtttgaagcccccttctccatggagtgggggcttctcagtagagtgttgttgctgaccagctgacctgagagtccagacttggcttcctgtggggtctaggttctcgcaattcaggacgtccttccatattcctgcccagcctgtggtgctcaaaacgtttgtcccatgggagacatgtgtgtgcaggagcctccctgcatggccccaggagcttcgttttcagtcttctgtgtgactgtcacctcatggggttcaatagagaattcatgtcactagcacctggccttgtgtggcttggagattaggtactgcccaaataggaggaaagcacagcctccttgagcctgccttctgcacgcacaggggcttcaggaaaggagtggccacagcatcccgaagggagcatctgtttacctggccgtggctctcagagcagcagaaggggtccagttttagactctgaagttggttgtgattgacagaaccccttgggagcaaactagtagatgttggattaaattctgggtgaaacccttttctcccacacaaaatagttttagtgacttttttcagtgtccattacttgccaggggcagttttagcagcactttcgatagattacctctaatcttcccaaccaaccaacaaggtagctattactgtccgcattttacaggcaaggaaacaggctccaagaggctgaggactttgcccaggatgacatagccagtggacaagccgtgtctgtcagctgtgaaggcttcactctaattgtccttctaccttgaatagaagttttcctgataagaataaacaaggaaaaggtccttgcctcctggaagaacgaatctaccaggtgatctattcattgtttcaactcagaatgcaattcattcaggaggtcatctgaccttcaccttggatggttagtttcactttttacatatagtttttgcggggttttattttataaaatccaagctccccagtgattgtgttttcattgttttcagccccccaactccagcccgcagcacatttccgctgtccgtcagtaactgtgtcctctctttatgcttgcttggggaatgttgttttctgactaggctgatcattatctaaagaatctaattctgttgatttttaaaacttataggaccataaacgttgtgttcctatatggacatggaaatatttatataattttatagaaaataaccttttagatggtcaaagtgtaaggaatttttttgtcagctaaccatttctacttcaaaaacatttcatgcaatattagaataaagttcttgtcattcctctcaaaa
//
by
@meso_cacase at
DBCLS
This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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