2025-07-02 19:19:50, GGRNA.v2 : RefSeq release 229 (Mar, 2025)
LOCUS XM_063718338 2229 bp mRNA linear PRI 06-MAR-2024 DEFINITION PREDICTED: Pongo abelii uncharacterized LOC134760505 (LOC134760505), transcript variant X1, mRNA. ACCESSION XM_063718338 VERSION XM_063718338.1 DBLINK BioProject: PRJNA944618 KEYWORDS RefSeq. SOURCE Pongo abelii (Sumatran orangutan) ORGANISM Pongo abelii Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pongo. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_072004) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_028885655.2-RS_2024_02 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.2 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 02/27/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2229 /organism="Pongo abelii" /mol_type="mRNA" /isolate="AG06213" /db_xref="taxon:9601" /chromosome="19" /sex="male" /tissue_type="fibroblast" gene 1..2229 /gene="LOC134760505" /note="uncharacterized LOC134760505; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 5 long SRA reads" /db_xref="GeneID:134760505" CDS 1262..1945 /gene="LOC134760505" /codon_start=1 /product="uncharacterized protein LOC134760505 isoform X1" /protein_id="XP_063574408.1" /db_xref="GeneID:134760505" /translation="
MPPSPQRLDEQALDGRPPGTRVFLWPPHSPSTHSLYTHFPTPALHAPGFLLSCFVVSLMLAPHSPRFRLAVQLPALHLHPKLSLPCELRAPSTFPSACSALLICADGTASLSLLRMEPWHHPPPAPPTLLGTKIHGPVCVFTATAHAPVLALVSNCLSHCPRLPGQTTEPPLPSLCKRSEALPNRGLRQSEHPLGPFQGRSRLHLSSESTDFFPFPSDIRHHKTQLL"
ORIGIN
agtgtgatgaaattactcatcgcaggaagacagcccctgcgcttttctgcaagctcctactgcagaagttttgtcatactttaaggtctctgtgagtttaatttccaaaaagggtaaaaagaaaggaaaaatgttagagggtcagtgtggccctctttcctgcccttttaaatctggcaggtgcctaaaaagatgagaaaaacaggaacccctcgcggcaggtatctgagaaacctgcgcttagactccgagagcaagcggccagcagttctgagactgggccgcggcctgcactagaaccgccaggagaggggctccgcgggttcacaggagaagacgccgtacctgtggtcgctggagaaggcaaggcgtagttcttttcctcttctatgaactgcagggccacggtgcagaaattgctttcatactgaaccacgagatgactcagagccaccaccagctcctgccgagagggagaagggacaataacactcactggggctggaaaatgatcgtggagcagcagtgagacttgagtcaccaacagaaaaaagaaaggttaagacaaaaccgtgcaattggcatcagaaacagggaccatcccttttcgaaccgtcagagcagaagccttggaatagcagagtgctgggagacggcaggccaccggctcacgggggaagcccagaatgcctgccagaatcctcaccaccactacatgtgcacgacacatcgggggtctcgtaaggacacggtgagtcacaggactccagagagggaaaggtaggaggcctcacagcctcttgcttacggtcaccactgggaccctggctgaaaacacctctctagatcacacccaatggctggcggcctttctgaatctgagcaccccagggccgagcgcagcggacaagccaaagcctgctcttttcaacacacgtgaaactttcattggtagatgtttctagtccctaagagggaatgggaaaagttgtggaactaaaacatcatctttaggcccaaatgccttggtccaaggaaacagacacaatttgcctctcttaggacagttcagtgctgtgacaggaacaggtggagatcctagaagtcactggggaacagaagggggatgtgggtttaaaaagcggaaagaacgtttttttccctacgacaactttttctgcctttttttttctgaaaagaaaaaatacggattcttagcagaaagccaagcgctgtgagaggaccccttgctagtcgtgtaatgcccccgtctccccagcggctggatgagcaggctctggatgggcgcccaccaggcaccagggtcttcttgtggccgccccactctccgtctacgcactctctgtacacgcactttcccaccccagccttacacgccccgggcttcctcctgtcatgctttgtggtttccctgatgctggcccctcactctcctaggttcaggctggctgtccagctgccagctcttcacctgcaccccaaactctccctgccctgtgaactgcgggcaccgtctactttcccttcagcctgcagcgccctcttgatttgcgccgatggaactgcaagtctctcactgctcagaatggagccctggcatcaccctccacccgcccctcccactctgctgggcaccaagatccatggcccagtgtgcgtcttcacggccacggcccacgccccggttctggcgctcgtctccaactgcctaagtcactgtcccaggctccccgggcaaaccacagaacccccgctgccttccctgtgcaagaggagtgaggcactgccgaaccggggcctccgacaaagcgaacacccactgggccccttccagggaagatcaaggctgcacctgtcttcagaaagcaccgatttttttccctttccttctgacatcaggcatcataaaactcagctcctgtgaccacggcaggccggagcagcgtcctgggaagcatcttgggaggccaaggcctgggattacagagtggatcacttgagcccaggaatttgacgccagcctggacaactcagcgagaccccatctctacaaaaaatacaaaaattagcccagcatggtggcaagcgcctgtggtcccagctactcaggaggctgaggtgggaggatcacttgagcccgggaggcagaggttgcagtgagccgagattgtgccactgtattccaatctgggtgacagactctgtttc
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Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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