LOCUS       XM_063557088            5474 bp    mRNA    linear   INV 06-MAR-2024
DEFINITION  PREDICTED: Mytilus trossulus copper-transporting ATPase 1-like
            (LOC134695717), transcript variant X1, mRNA.
ACCESSION   XM_063557088
VERSION     XM_063557088.1
DBLINK      BioProject: PRJNA1081829
KEYWORDS    RefSeq.
SOURCE      Mytilus trossulus (common blue mussel)
  ORGANISM  Mytilus trossulus
            Eukaryota; Metazoa; Spiralia; Lophotrochozoa; Mollusca; Bivalvia;
            Autobranchia; Pteriomorphia; Mytilida; Mytiloidea; Mytilidae;
            Mytilinae; Mytilus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_086386) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_036588685.1-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/29/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5474
                     /organism="Mytilus trossulus"
                     /mol_type="mRNA"
                     /isolate="FHL-02"
                     /isolation_source="marine dock, intertidal"
                     /db_xref="taxon:6551"
                     /chromosome="14"
                     /tissue_type="Mantle and muscle"
                     /dev_stage="adult"
                     /geo_loc_name="USA: San Juan Island, Washington"
                     /collection_date="2021-06-23"
                     /collected_by="Samuel FM Hart"
     gene            1..5474
                     /gene="LOC134695717"
                     /note="copper-transporting ATPase 1-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 3 Proteins"
                     /db_xref="GeneID:134695717"
     CDS             40..4443
                     /gene="LOC134695717"
                     /codon_start=1
                     /product="copper-transporting ATPase 1-like isoform X1"
                     /protein_id="XP_063413158.1"
                     /db_xref="GeneID:134695717"
                     /translation="

MTDKIIDTDEMEKTAVLEIDGMTCQSCVKNIKAGLAEEKGIYSLEVILEKKEAVIKYSPTEISPPIIAEKIDEMGFPARVKTVHPATTDARVDNSENSVEISVKGMTCMSCVRNIESSISRVNGVNQISVSLENEKATVMYDSVKISPNQIAEAIDDMGFEANVVKQPKSLITRITVEGMTCQSCVRNIESNLKTKAGVDEIRVSLADKEAFIIYNPDHTNPEVLREAIDDMGFDASLPRQSSVDKEFDRLAERSSTRSGGPESECEISIVGMTCQSCVRNIESNIKDKSGIFSISVSLEKENGMVKYNKLVTTPERIADMIDDMGFDAKVAGDTGSDTETVTVDIRGMTCHSCVNNIEGNISKNPGVKSIKVSLADQNGVIEYLKNRVTPQMLCDAIDDMGFEASLPVIHNDLEVPTVTITRSASQASKLSGTGSLKVDVLKGSVQFKKGVKDDDDDEDLEKCFLHITGMTCSSCVSSIEKNLKKVEGIKHVLVALMAQKAEIKYDPEYILSNQIANRVNDLGFHATVMESESLGKGTVELLITGMTCSSCVHLIESTLVKEKGVLTASVALATNKGRFTFDTEITGPRDIIDKIKALGFNADLFTDDDKNASRYDHRHAIRRWRNSFLWSLIFGVPAMSIMMYFMFVEPPDDDHADHSNITGNMTTPKPKYNGHMYQIMLTPGLSLDNLLMFLLATPVQFLGGKYFYIQAWKAVKHKAANMDVLVVLATSISYTYSIIVVIVAMILREPMSPVTFFETTPMLMVFISLGRWLEHVAKGKTSEALAKLMSLQASEAVLCEVDKENNILKESTISVDLVQRGDVLKVVPGEKIPVDARVIEGTSTCDESLITGEAMPVVKTTGSDVIGGSINQNGMLLVQATHVGSETTLSQIVKLVEEAQTSKAPIQQLADTIAGYFVPIVCSLSTLTLVAWVIVGYESIYNIDPEFDENEGITRHELIFQKAFQFAITVLSIACPCALGLATPTAVMVGTGVGATNGILIKGGEPLETTHKIKSIVFDKTGTVTHGVPKVSRVAKFVDDKVCSLMKLLAIAGTAEASSEHPIASAIVKYTKQTLNADNLGKVSDFQAVPGCGLKCTVSQIEPLLTNLDLEQINNRKNEVGSLRIKTENVLNDGNTAIHIEDIELMGASAPQPYQVLIGNREWMQRNGLIVTDLMDNTMSEHEDQGHTAVLCAIDGILVAMLAVADTVKSEAHLAITTLREMGLQVILLTGDNQKTARAIARQVGIQKVFAEVLPSHKVKKIKQLQSSGQKVAMVGDGVNDSPALAQADVGIAIGTGTDVAVEAADIVLIKNDLLDVVAAIKLSKMTVRRIRINFVAASVYNLIGIPIAAGVFSPLGLTLKPWMASAAMAMSSVSVVTSSLLLKLFKKPKKEKLLTQEYHMQFVKDQSLEISVQRGIGYEGTSREGSTQGSLLSRLSGKRKPQSVDHTSLLENNEDDEDCDQNTKL"

     polyA_site      5474
                     /gene="LOC134695717"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      

tttttcagaaaactgaatcagtttgtgaattcattaaaaatgacagacaaaattatagatacagatgaaatggaaaagacagcagtgttagagatagatggaatgacatgtcagagttgtgtgaaaaatataaaggctggtctggctgaggagaaaggaatttacagtttagaggttattttagagaaaaaagaggctgtgataaagtacagtcctacagaaatatcaccacccatcattgctgaaaagattgatgaaatgggtttcccagccagagtgaaaactgtccatccagctactacagatgccagagtagacaactccgaaaatagcgtggaaattagtgtgaaggggatgacctgcatgtcatgtgtcaggaatatagaaagtagcatatcacgagtaaatggagtaaaccagatttctgtttcattagaaaacgaaaaagctacagtcatgtacgattcagtgaaaatatctccaaatcagattgcagaagcaatcgatgatatgggatttgaagcaaatgttgtgaaacagccaaaatctttaataacaagaataactgttgaaggaatgacctgtcagtcttgtgttagaaacattgagtcaaacctaaaaaccaaagctggcgttgatgagattagagtttctcttgctgacaaagaagcctttattatttataacccagaccatacaaatccagaggtactgagagaggctattgatgacatgggttttgatgcctctttacccagacagtcatctgttgataaagaatttgaccgtcttgcagagagaagttcaacacgatcaggaggcccggaatctgaatgtgaaatttctatcgtaggcatgacgtgtcaatcatgtgtaagaaatattgaaagtaatataaaggataaatctgggatcttttcaatcagcgtcagtctagaaaaagaaaatggaatggtcaagtacaacaagctagttacaacaccagagaggatagcagacatgattgatgatatggggtttgatgccaaagtagcaggggatacagggtcagatactgagacagtcacagttgacatcagaggaatgacatgtcattcatgtgtcaataatatagaggggaatatctcaaagaatcctggggtaaagtctatcaaggtgtccctggccgatcaaaatggtgtaatagaatacctgaagaacagagtcaccccacagatgttatgtgatgctatagatgatatgggatttgaagcctcactaccagtaatacacaatgacttagaagtacctacagtaactattactagatctgctagtcaggcctctaaactcagtggtactggtagtctgaaggtggatgttttaaagggatctgtgcagtttaaaaagggtgtaaaagatgatgatgatgatgaagacttggagaaatgttttctacatattacagggatgacatgttcatcatgtgtcagttctatagaaaaaaatctcaaaaaagttgaaggtataaaacatgtgctggtagcacttatggcacagaaagctgaaatcaaatatgatccagaatatatattatccaatcagatagctaacagggtcaatgaccttgggttccatgccactgttatggaatcagaatcccttggaaaaggcacggttgagttacttataactggcatgacatgttcgtcatgtgtacacttgatagaatctacactggtaaaggaaaagggagttttaacggcttctgttgccttggcaaccaataaaggaaggtttacctttgatacagagatcacaggaccaagagacataatagacaaaattaaggcattgggattcaatgcagatttgtttactgatgatgataaaaatgcttctagatatgaccatagacatgcaataaggagatggaggaactcattcttatggtcgttgatatttggtgtgccagccatgtctataatgatgtactttatgtttgtggaaccccctgacgatgaccatgcagatcatagcaatataacggggaacatgacaacacctaaacctaaatataatggtcacatgtaccaaataatgttgacacctggactgtcgttagataacctactaatgttcttattggcaacacctgttcagtttcttggtggtaaatatttctatatacaagcttggaaagcagtcaaacataaagctgctaacatggatgtattggttgtcttggcaacatccatatcttacacttactccataatagttgtcattgttgctatgatactccgtgaaccaatgagtcctgttacattttttgagacaacgccaatgttgatggttttcatttctcttggaagatggttagaacatgtcgcaaagggtaagacatcagaagctttagccaaactgatgtcacttcaagcttcagaggctgtattatgtgaggtagacaaagagaacaacatcttgaaggaatccacaatcagtgtagatctggtccagagaggggatgttttaaaggttgtacctggtgaaaagatcccagtagatgccagagttatagaaggaacatcaacgtgtgatgaatctctgattacaggagaagctatgcctgttgttaaaaccacaggtagtgatgtgataggaggctctattaaccagaatggtatgttgttagtacaggccacacatgtaggatcagaaaccactctctcacagattgtcaaactggtggaggaggctcagacatctaaagctccaattcaacagttggcagacaccattgctggatactttgttcctatcgtctgctctctgtcgaccttgaccttggttgcctgggtgattgtgggatatgaaagtatttacaacattgatcctgagtttgatgagaatgagggtatcacaagacatgaactgattttccagaaagctttccagtttgctatcactgtactgagtatagcctgcccatgtgccctgggactggccacacccacagctgtcatggtgggcactggggtaggagctacaaatggaatattaattaagggaggagaaccactagagacaacacacaagataaagagtattgtttttgacaagactgggacagtgactcatggtgtacctaaagtatcacgagttgccaagtttgttgatgacaaagtttgctcattaatgaagctgttagccatcgcaggaacagctgaagccagcagtgaacatccaatagcatcagctattgtcaaatatacaaaacagacattaaatgcagataaccttggtaaagtcagtgatttccaagcagttcctggatgtggccttaaatgtaccgtatctcagatagaacctctacttacaaacttagatctagagcaaatcaacaatcgtaaaaatgaagtcgggagcctccgtatcaaaactgaaaatgttttgaatgatggcaatactgctatacatatagaggatatagaacttatgggagcctcagcacctcagccgtatcaggtgttgattggtaacagagaatggatgcagcgcaatggactgatcgtcacagatctaatggacaacaccatgtcagaacatgaagatcagggtcacacagctgttttatgtgcaatcgatggtattttggtagccatgttagctgtagcagatactgtgaaatcagaggcccaccttgccataactacacttagggagatgggattacaagttatcttactgactggggataatcagaaaacagccagggctattgccagacaggtgggaatacagaaagtttttgctgaggttttaccatcacacaaagtgaagaaaataaaacagttacagagcagtggtcagaaagtagcaatggttggtgatggagtgaacgactcgccagcgctagcccaggctgatgttggtatagctataggtacaggcacagatgtagcagttgaagcagctgatattgttcttatcaagaatgatttacttgatgtagtggctgccattaaattatccaagatgacagtaagaagaatcagaatcaattttgtagctgcttctgtctacaacctaatagggatacctatagctgcaggtgtgttctcaccacttggtttgaccttgaaaccttggatggcctctgctgccatggcaatgtcctctgtctctgttgtgacatcatcactgcttcttaaattgtttaagaagccaaagaaagagaaattgctgacacaggaatatcatatgcaatttgtcaaggaccagtcacttgaaatatcagtacagagaggcataggttatgagggaaccagtagagaaggaagtacacaagggagcttactctctcgactcagtggaaaacgtaaacctcaatcagtagatcacaccagtctgttggaaaacaatgaagatgatgaagactgtgatcaaaatacaaagttgtaaaaacttcttgtaaaataactttttacatgttcagaactagtgctaatttaagatatgttatattctatttatatttatattatgtacattctcaatgacttaacaaaaagaatgtttactttgactgaaactaaagattgagtaaacctgtagatttattgtattaagattattttcatatatgtttgtttctggtgctcatttgttatttttatgtaagtttgaaatcagcagttcactaaatccagtttagttttattttaaaaagttgttctccttaaatcacacttctaactatctaattaaattcagaatattatgtccttgtttataactacagcaatattgataattaaaacttggctgttcaccttttttttttatgttggatgtttattccagatatctgcactatgaaagggaccacatttttctttataaaaaatatatttgtttaattttatagtatgatcactttcataacaatttaataaaaaaatcttatatgcatatacatttttaatcatttgatatatttcatacaaacatgagtaccatttattgattatcatatttgatattatttcctatgaaccaatcatgatgacttatctttggtaagtgtataagaaataagacaaaactatagctaccatactgcatatagatgtcttatggttatgtcattgggtgtctcttattgatgtcagaaatcattttattcctattgacattgaagttccaatagttaaagttttcctatcaagtaagaaggaggcactgtggattttttatcatttgttggatacaaactttctaggatttcttgggtgaagatgacccatgaatttaaatgttcaaagaattacaaatgttccatcaggttttataaacacttgggcaaaactttgaaattaaatgtccatgaaaatacaagttactttcatcaatccatgaaaattggtactgatgtagccacacaaataaatgaatccacagtaaatgattgaaaatatgaaatgagaggacaa

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