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Previous release (v1)
2026-06-12 18:21:39, GGRNA.v2 : RefSeq release 233 (Jan, 2026)
LOCUS XM_063515674 1671 bp mRNA linear INV 28-FEB-2024
DEFINITION PREDICTED: Cydia amplana zinc finger protein 652-like
(LOC134659976), mRNA.
ACCESSION XM_063515674
VERSION XM_063515674.1
DBLINK BioProject: PRJNA1074829
KEYWORDS RefSeq; includes ab initio.
SOURCE Cydia amplana
ORGANISM Cydia amplana
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
Pterygota; Neoptera; Endopterygota; Lepidoptera; Glossata;
Ditrysia; Tortricoidea; Tortricidae; Olethreutinae; Grapholitini;
Cydia.
COMMENT MODEL REFSEQ: This record is predicted by automated computational
analysis. This record is derived from a genomic sequence
(NC_086094) annotated using gene prediction method: Gnomon.
Also see:
Documentation of NCBI's Annotation Process
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI RefSeq
Annotation Status :: Full annotation
Annotation Name :: GCF_948474715.1-RS_2024_02
Annotation Pipeline :: NCBI eukaryotic genome annotation
pipeline
Annotation Software Version :: 10.2
Annotation Method :: Gnomon; cmsearch; tRNAscan-SE
Features Annotated :: Gene; mRNA; CDS; ncRNA
Annotation Date :: 02/09/2024
##Genome-Annotation-Data-END##
##RefSeq-Attributes-START##
ab initio :: 39% of CDS bases
##RefSeq-Attributes-END##
FEATURES Location/Qualifiers
source 1..1671
/organism="Cydia amplana"
/mol_type="mRNA"
/db_xref="taxon:1869771"
/chromosome="26"
gene 1..1671
/gene="LOC134659976"
/note="zinc finger protein 652-like; Derived by automated
computational analysis using gene prediction method:
Gnomon."
/db_xref="GeneID:134659976"
CDS 112..1671
/gene="LOC134659976"
/codon_start=1
/product="zinc finger protein 652-like"
/protein_id="XP_063371744.1"
/db_xref="GeneID:134659976"
/translation="
MLKSLKQESAEELLACRICLATDTHLYGILEHRLENAFIDITGTTLSAWDGYPQHICVACRALLRRASDLRARSRRAQRALKRILMLQHTITTDYIRTVDRIAEGLSLPLSISVCPEPVLFQHDDNDDLIKEEIPLLSPSPLPSLPSLPSPKDIIVKDELACEYESNDDVALSELQERPGEHKGKRKKVMRKSKVSRLSLVVYMKDELACEYESNDDVALSELQERPGEHKGKRKKVMRKSKVSRLSLVVYMKDELACEYESNDDVALSELQERPGEHKGKRKKVMRKSKVSRLSLVVYMKDELACEYESNDDVALSELQERPGEHKGKRKKVMRKSKVSRLSLVVYMKDELACEYESNDDVALSELQERPGEHKGKRKKVMRKSKTKKTKSEKVKSRERKKTEKIRDEDFPAFEKEYNFDVVILSREQQIEDMASRKEKDNYMNSQFKCEKCFKGFYTEATLANHDSKHHDETVGPHSCELCLCRFRIPAILRRHLATHRLRFVCQHCGFTARDRYCY"
misc_feature 157..>312
/gene="LOC134659976"
/note="Zinc-finger associated domain (zf-AD); Region:
zf-AD; smart00868"
/db_xref="CDD:214871"
misc_feature 1459..1521
/gene="LOC134659976"
/note="C2H2 Zn finger [structural motif]; Region: C2H2 Zn
finger"
/db_xref="CDD:275368"
misc_feature 1549..1611
/gene="LOC134659976"
/note="C2H2 Zn finger [structural motif]; Region: C2H2 Zn
finger"
/db_xref="CDD:275368"
ORIGIN
ctgacatgtcactctatctataactgtgtttacatatcgattttacgtattacacagattttacaacaataatcacacaaaatccgttctaaatgcggtagccggctcaaaatgttgaaaagcttgaagcaggaaagtgcggaggagctgctagcttgccgcatatgtctcgcgacggacactcatttgtatgggattttggagcaccgattggaaaatgctttcattgatattacaggcactaccctgtcggcatgggacggctacccgcagcacatctgcgtggcgtgccgcgcgctgctgcgccgcgcgagcgacctgcgcgcccgctcccgccgcgcgcagcgggcactcaagaggatcctcatgctacaacatactataacgacagactacattcgtacagtggaccgtatagctgagggcctaagtctgcctctctccatctctgtctgtcctgagcctgtactcttccaacatgatgacaacgacgatcttataaaagaggagatcccccttctctccccctccccgctcccgtccctcccctccctcccctcccccaaagacatcatagtgaaggacgagctggcttgcgagtacgagtccaacgacgacgtcgctctcagcgagctgcaggagagacccggggagcacaaggggaagaggaaaaaggttatgaggaagtcgaaggttagtcgtctctctctggtcgtctatatgaaggacgagctggcttgcgagtacgagtccaacgacgacgtcgctctcagcgagctgcaggagagacccggggagcacaaggggaagaggaaaaaggttatgaggaagtcgaaggttagtcgtctctctctggtcgtctacatgaaggacgagctggcttgcgagtacgagtccaacgacgacgtcgctctcagcgagctgcaggagagacccggggagcacaaggggaagaggaaaaaggttatgaggaaatcgaaggtgagtcgtctctctctggtcgtctatatgaaggacgagctggcttgcgagtacgagtccaacgacgacgtcgctctcagcgagctgcaggagagacccggggagcacaaggggaagaggaaaaaggttatgaggaaatcgaaggtgagtcgtctctctctggtcgtctatatgaaggacgagctggcttgcgagtacgagtccaacgatgacgtcgctctcagcgagctgcaggagagacccggggagcacaaggggaagaggaaaaaggttatgaggaaatcgaagacgaaaaaaacaaagtctgagaaagtgaagagcagagaacggaaaaagactgagaagattcgggatgaagacttccccgcgttcgagaaggaatacaacttcgatgtcgtcatactgtccagggaacaacagattgaagacatggcgtcgcggaaagagaaggacaactacatgaactctcagttcaaatgcgagaaatgtttcaaggggttctacaccgaggcgacactcgccaaccacgactccaaacatcacgacgagactgtgggtccgcactcgtgcgagctctgcctgtgccggttccgtatccccgccatcctgcggcgccacctcgccacgcaccggctacggttcgtgtgccagcactgcggcttcaccgccagggacaggtattgttactaa
//
by
@meso_cacase at
DBCLS
This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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