2024-10-04 20:58:01, GGRNA.v2 : RefSeq release 225 (Jul, 2024)
LOCUS XM_063206668 1081 bp mRNA linear VRT 21-FEB-2024 DEFINITION PREDICTED: Engraulis encrasicolus putative mediator of RNA polymerase II transcription subunit 26 (LOC134455543), transcript variant X1, mRNA. ACCESSION XM_063206668 VERSION XM_063206668.1 DBLINK BioProject: PRJNA1073985 KEYWORDS RefSeq. SOURCE Engraulis encrasicolus (European anchovy) ORGANISM Engraulis encrasicolus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Clupei; Clupeiformes; Clupeoidei; Engraulidae; Engraulinae; Engraulis. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_085865) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_034702125.1-RS_2024_02 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.2 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 02/08/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..1081 /organism="Engraulis encrasicolus" /mol_type="mRNA" /isolate="BLACKSEA-1" /db_xref="taxon:184585" /chromosome="9" /sex="female" /tissue_type="muscle" /dev_stage="adult" /geo_loc_name="Turkey: East Black Sea Region" /collection_date="2020-02-10" gene 1..1081 /gene="LOC134455543" /note="putative mediator of RNA polymerase II transcription subunit 26; Derived by automated computational analysis using gene prediction method: Gnomon." /db_xref="GeneID:134455543" CDS 76..846 /gene="LOC134455543" /codon_start=1 /product="uncharacterized protein LOC134455543 isoform X1" /protein_id="XP_063062738.1" /db_xref="GeneID:134455543" /translation="
MMCGANGKQLSLAVLFVAIVSYDFRLANGGIDFKPSTNVNNSVDAASTSDIDFNPSTSVSNSINYKPSSSSDPDIKGLIPQQLQTHITLVDDEQQAIKDEQQVLKGEQQVLKGEQQVLKDELQILKDELQLVKDELQLVKDKSKRPVIQIYNDDQNPHVTSKHVQQPKPSLTTQATAPPKQQTKQQDGGSIPQHGKSKTPVAQIYDDQKPHMSKHVQQTQPSLTRQSTPEQQTEQQPLTAGHKSKHQQKRQLYSLS"
ORIGIN
acttaaaagctgcattgatgaaactgctgctatgtgactgtcaactgtgtggtggtagcaactaataacaactgaatgatgtgtggtgcaaatggaaaacagttaagcctggctgtgctttttgtagccattgtctcctatgactttaggcttgcgaatggtggcattgacttcaaaccatccacaaatgtaaacaacagcgttgatgcggcatccacgagtgacattgatttcaatccgtccacaagtgtcagcaacagtattaattacaagccatccagcagcagtgaccctgacatcaaggggcttatccctcaacagcttcaaacacacattacccttgttgatgatgaacagcaggctatcaaagatgaacagcaggttctcaaaggtgaacagcaggttctcaaaggtgaacagcaggttctcaaagatgaactgcagattctcaaagatgaactgcaactagtcaaagatgaactgcagctagtcaaagacaaatccaaacgacctgtgatccagatctacaatgatgaccagaaccctcacgttacttccaaacatgtgcaacagccaaagccatccttgacaacacaggctacagccccaccaaagcagcagaccaagcaacaagatgggggtagtattcctcaacatggcaaatccaaaacccctgtggcacaaatctatgatgaccagaagccccatatgtccaaacatgtgcaacagacacagccatccttgacaagacagtctacaccagagcagcagacagagcaacagccccttacagcagggcataagtctaaacaccagcagaagcggcagctctactctctcagctgaatctgccatccagagctggactcgatggaggtgttaaaatgggtatgttgaaacacaattttacaacacaacacaattttacattgcctactagaagatggcttcaggcagttcagcacagactgggtcaaggcctacacttgtttccatgttttagagtgagacgtctgcacacttaaattactttttttttttttagaagttttaagaagttttgatcatttaggtcttcctc
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@meso_cacase at
DBCLS
This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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