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Previous release (v1)
2025-12-17 01:54:43, GGRNA.v2 : RefSeq release 232 (Sep, 2025)
LOCUS XM_063206668 1081 bp mRNA linear VRT 21-FEB-2024
DEFINITION PREDICTED: Engraulis encrasicolus putative mediator of RNA
polymerase II transcription subunit 26 (LOC134455543), transcript
variant X1, mRNA.
ACCESSION XM_063206668
VERSION XM_063206668.1
DBLINK BioProject: PRJNA1073985
KEYWORDS RefSeq.
SOURCE Engraulis encrasicolus (European anchovy)
ORGANISM Engraulis encrasicolus
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Actinopterygii; Neopterygii; Teleostei; Clupei; Clupeiformes;
Clupeoidei; Engraulidae; Engraulinae; Engraulis.
COMMENT MODEL REFSEQ: This record is predicted by automated computational
analysis. This record is derived from a genomic sequence
(NC_085865) annotated using gene prediction method: Gnomon.
Also see:
Documentation of NCBI's Annotation Process
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI RefSeq
Annotation Status :: Full annotation
Annotation Name :: GCF_034702125.1-RS_2024_02
Annotation Pipeline :: NCBI eukaryotic genome annotation
pipeline
Annotation Software Version :: 10.2
Annotation Method :: Gnomon; cmsearch; tRNAscan-SE
Features Annotated :: Gene; mRNA; CDS; ncRNA
Annotation Date :: 02/08/2024
##Genome-Annotation-Data-END##
FEATURES Location/Qualifiers
source 1..1081
/organism="Engraulis encrasicolus"
/mol_type="mRNA"
/isolate="BLACKSEA-1"
/db_xref="taxon:184585"
/chromosome="9"
/sex="female"
/tissue_type="muscle"
/dev_stage="adult"
/geo_loc_name="Turkey: East Black Sea Region"
/collection_date="2020-02-10"
gene 1..1081
/gene="LOC134455543"
/note="putative mediator of RNA polymerase II
transcription subunit 26; Derived by automated
computational analysis using gene prediction method:
Gnomon."
/db_xref="GeneID:134455543"
CDS 76..846
/gene="LOC134455543"
/codon_start=1
/product="uncharacterized protein LOC134455543 isoform X1"
/protein_id="XP_063062738.1"
/db_xref="GeneID:134455543"
/translation="
MMCGANGKQLSLAVLFVAIVSYDFRLANGGIDFKPSTNVNNSVDAASTSDIDFNPSTSVSNSINYKPSSSSDPDIKGLIPQQLQTHITLVDDEQQAIKDEQQVLKGEQQVLKGEQQVLKDELQILKDELQLVKDELQLVKDKSKRPVIQIYNDDQNPHVTSKHVQQPKPSLTTQATAPPKQQTKQQDGGSIPQHGKSKTPVAQIYDDQKPHMSKHVQQTQPSLTRQSTPEQQTEQQPLTAGHKSKHQQKRQLYSLS"
ORIGIN
acttaaaagctgcattgatgaaactgctgctatgtgactgtcaactgtgtggtggtagcaactaataacaactgaatgatgtgtggtgcaaatggaaaacagttaagcctggctgtgctttttgtagccattgtctcctatgactttaggcttgcgaatggtggcattgacttcaaaccatccacaaatgtaaacaacagcgttgatgcggcatccacgagtgacattgatttcaatccgtccacaagtgtcagcaacagtattaattacaagccatccagcagcagtgaccctgacatcaaggggcttatccctcaacagcttcaaacacacattacccttgttgatgatgaacagcaggctatcaaagatgaacagcaggttctcaaaggtgaacagcaggttctcaaaggtgaacagcaggttctcaaagatgaactgcagattctcaaagatgaactgcaactagtcaaagatgaactgcagctagtcaaagacaaatccaaacgacctgtgatccagatctacaatgatgaccagaaccctcacgttacttccaaacatgtgcaacagccaaagccatccttgacaacacaggctacagccccaccaaagcagcagaccaagcaacaagatgggggtagtattcctcaacatggcaaatccaaaacccctgtggcacaaatctatgatgaccagaagccccatatgtccaaacatgtgcaacagacacagccatccttgacaagacagtctacaccagagcagcagacagagcaacagccccttacagcagggcataagtctaaacaccagcagaagcggcagctctactctctcagctgaatctgccatccagagctggactcgatggaggtgttaaaatgggtatgttgaaacacaattttacaacacaacacaattttacattgcctactagaagatggcttcaggcagttcagcacagactgggtcaaggcctacacttgtttccatgttttagagtgagacgtctgcacacttaaattactttttttttttttagaagttttaagaagttttgatcatttaggtcttcctc
//
by
@meso_cacase at
DBCLS
This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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