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Previous release (v1)
2025-11-01 09:51:16, GGRNA.v2 : RefSeq release 232 (Sep, 2025)
LOCUS XM_062837026 4339 bp mRNA linear PLN 06-FEB-2024
DEFINITION Neurospora hispaniola NRDE-2, necessary for RNA
interference-domain-containing protein (B0T23DRAFT_377316), mRNA.
ACCESSION XM_062837026
VERSION XM_062837026.1
DBLINK BioProject: PRJNA1072703
BioSample: SAMN06296510
KEYWORDS RefSeq.
SOURCE Neurospora hispaniola
ORGANISM Neurospora hispaniola
Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina;
Sordariomycetes; Sordariomycetidae; Sordariales; Sordariaceae;
Neurospora.
REFERENCE 1 (bases 1 to 4339)
AUTHORS Hensen,N., Bonometti,L., Westerberg,I., Brannstrom,I.O.,
Guillou,S., Cros-Aarteil,S., Calhoun,S., Haridas,S., Kuo,A.,
Mondo,S., Pangilinan,J., Riley,R., LaButti,K., Andreopoulos,B.,
Lipzen,A., Chen,C., Yan,M., Daum,C., Ng,V., Clum,A., Steindorff,A.,
Ohm,R.A., Martin,F., Silar,P., Natvig,D.O., Lalanne,C., Gautier,V.,
Ament-Velasquez,S.L., Kruys,A., Hutchinson,M.I., Powell,A.J.,
Barry,K., Miller,A.N., Grigoriev,I.V., Debuchy,R., Gladieux,P.,
Hiltunen Thoren,M. and Johannesson,H.
TITLE Genome-scale phylogeny and comparative genomics of the fungal order
Sordariales
JOURNAL Mol Phylogenet Evol 189, 107938 (2023)
PUBMED 37820761
REMARK Publication Status: Available-Online prior to print
REFERENCE 2 (bases 1 to 4339)
CONSRTM NCBI Genome Project
TITLE Direct Submission
JOURNAL Submitted (06-FEB-2024) National Center for Biotechnology
Information, NIH, Bethesda, MD 20894, USA
REFERENCE 3 (bases 1 to 4339)
AUTHORS Haridas,S., Hensen,N., Bonometti,L., Westerberg,I.,
Brannstrom,I.O., Guillou,S., Cros-Aarteil,S., Calhoun,S., Kuo,A.,
Mondo,S., Pangilinan,J., Riley,R., LaButti,K., Andreopoulos,B.,
Lipzen,A., Chen,C., Yanf,M., Daum,C., Ng,V., Clum,A.,
Steindorff,A., Ohm,R., Martin,F., Silar,P., Natvig,D., Lalanne,C.,
Gautier,V., Ament-velasquez,S.L., Kruys,A., Hutchinson,M.I.,
Powell,A.J., Barry,K., Miller,A.N., Grigoriev,I.V., Debuchy,R.,
Gladieux,P., Thoren,M.H. and Johannesson,H.
CONSRTM Lawrence Berkeley National Laboratory
TITLE Direct Submission
JOURNAL Submitted (26-JUN-2023) DOE Joint Genome Institute, 1 Cyclotron
Road, Berkeley, CA 94720, USA
COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final
NCBI review. This record is derived from an annotated genomic
sequence (NW_026944408).
##Metadata-START##
Organism Display Name :: Neurospora hispaniola FGSC 10403 v1.0
##Metadata-END##
FEATURES Location/Qualifiers
source 1..4339
/organism="Neurospora hispaniola"
/mol_type="mRNA"
/strain="FGSC 10403"
/db_xref="taxon:588809"
/chromosome="Unknown"
/geo_loc_name="Haiti: Leogane"
gene 1..4339
/locus_tag="B0T23DRAFT_377316"
/db_xref="GeneID:87874648"
CDS 317..4090
/locus_tag="B0T23DRAFT_377316"
/note="NRDE-2, necessary for RNA
interference-domain-containing protein; NRDE-2, necessary
for RNA interference-domain-containing protein"
/codon_start=1
/product="NRDE-2, necessary for RNA
interference-domain-containing protein"
/protein_id="XP_062694154.1"
/db_xref="GeneID:87874648"
/db_xref="InterPro:IPR013633"
/db_xref="JGIDB:Neuhi1_377316"
/translation="
MSSNEVKRRAVPKFTSFAPATPAPKADSEKRSLTLRGSSRDREKKEDRERRHRRRDYDRDRHKDDSDSERERERERGRDRDRHHARQHDRHHSRHHDRDRHHRRRSASPASQIKEARHPLHKPSSTSQDTDLFYFDKSEDPLIFRYGGNERSKIPSYRRFGAGKFIGSPGYLSVSFQGSKEVFTIRSPGEGRGNGSVFGDKTLMAWARAKGAKAKHIKPGVGGEYGESAAEDGDYISLEPPRKRQRTDRSPAPEDGDKTPDYRSIYGKAKSEDEDSDGDETLSDSESENKVGSHLSDMSSAKKRSLELHRQVKNSPQDTKAWLELIGLQDTLFMEHQLEGQVITGDQVKALAELKLSLYEEALPHALDISLKETLLNGMMREGEKVWDPKQLAKRWEETTKTNPDSFLLWVSRLNYELSQVATFTYDEPKTFMVTKMQFLNRTLATASSEKNVVMLCSQLIYVFVRLTCYLRDSGYIELAVAAWQATLELNFCRPKNASNFHSVIEDFSDFWESEVPRIGEGNAKGWRHFVEDVGAMTDPPEAIPREPSGPPQTRDPFEAWALLERQEAAKARMPARTLDEGTDDDPFRIVMFSDIKDLVLWIPSQMLPQAQLQLVDAFLTFCRLPNTAKSSALKDPFIAPRGQAFESLLDQIGGHDVLNSVEIERKPPLFGQQGGNMALSPELLFSGQDWFQYLGQWSSLSIDADGDVRPPWVLETLHYLVLTCGIEQLAEYYLALAWLSEPLGVKKVAKGLLKRYSSNTRLYNAYAMIEFANGNIGIAEKVLLSATSQSSPDSQLLWNTWVWMHLNAGNMQLALLRLLSSVDITLDVEKGLPVSPALLLKARAHFSTKRDYSLSSHQTEPALQYAESLALLDYLSRTENSSGSTKYSSQGNITSALANIQSFTTELSSLGHQTLHERLLQIGARLLYHHANHGPYKPSTLRQYLHEFLRLFPHNTLFLSLLAWAEQSTLRISDPVRSIVRESLSSTRDKDTSSSEGSHTPVPIPTYRFAIEYELLSGAGLRPVGAATIHSTKAAFEAAVSDPSACRYNVDIWIGYIRFLTQVYFHALSLSYGSSATAGTRERGIKKADAQAASTLKALKDVFYRAVAACPWSKKLYMAAFPAGSTAEPGEPGEGGGSALVKALSSGELRAVFGTMVAKGLRVHVDFEGFERKWREKEEDEKRVGREKEKVEKEEKEESERRARLERERRWDLEDSLHKNRHMDSDRGERGGGQYEKYNDRERSREWDRRREGGRR"
ORIGIN
tagtgtaggtaagctccgtgccggtaaaagtcaggtgggtccgcttggggtccacccgttaggccatagcgttcacgggcttgtcacctctcactgtgccactcctacagtattgtaggtagacctcagacccaacactcccgtctgttaccgctggcaactgcaaatcatccactgccagctgtctcgtcttcatcatctaaccttctttacctttgatggcatcgcgtcgaccaatattgcggacagaagccttcgaaacccagtagacctgattggaacttatggaggaaattcgggagtcctacgaatcgccatgtcgtccaacgaggtgaaacgccgcgcggtgcccaagttcacctcattcgcaccagccacaccagcccccaaggcagactccgaaaaacgatcattgacactccgaggctcctcacgagatcgggagaagaaggaggaccgtgaaagacgacatcgccggagggattatgatcgggaccgtcacaaggacgacagtgatagcgagagggagagggaaagagaaagagggagggacagagacaggcatcatgccaggcagcatgacagacatcacagtcgacaccatgatcgagatcgccatcaccgcagacggtcagccagccctgcctcacagatcaaagaagcccgtcatccgctccacaagccatcatctaccagccaggataccgatctgttttactttgacaaaagtgaggaccccttgattttccgttatggcggaaatgagcgctcaaaaataccatcttatcgccgctttggtgctggaaaattcatcggctccccagggtatctctccgtttctttccaaggttcgaaggaagtcttcaccatccgaagcccgggcgagggtaggggcaacggttcggtcttcggagacaagactttgatggcctgggccagagccaagggagcgaaagcaaagcacatcaagcctggtgtgggtggtgaatatggagaatcagcagcagaggatggcgactacatatctctcgagcctcccagaaaacggcaacgtaccgatcgatcaccagcgcctgaggacggtgacaagacaccagattacaggtccatctatggcaaagccaagtcagaggatgaggactcggatggtgatgagacattgtccgattcagagagcgaaaataaggtgggcagtcatctttcggacatgtcaagcgccaagaagagatctcttgaactccatcgccaggtcaaaaatagcccccaggacaccaaagcttggctcgagttgattgggttgcaagacaccctcttcatggagcatcaacttgagggccaggtcataactggggatcaggtaaaagccctggccgaactcaagttgtctctctatgaagaggcccttccccatgcacttgacatctctttgaaggagaccttgttgaacggaatgatgcgcgagggcgaaaaggtgtgggatcccaagcagcttgcgaagcgctgggaagagaccaccaagaccaaccccgacagcttcttgttatgggtttcacgactaaactatgagctttcgcaggtcgcaactttcacatacgatgaaccgaagaccttcatggtgaccaagatgcaattcctcaaccgcacattagcaactgcatcttcggaaaagaatgttgtcatgctgtgtagccagctgatttacgtgttcgtcagattaacgtgctaccttcgggactctggctacattgagctggctgtggctgcatggcaagcaactctagaactgaacttctgccggcccaagaacgcttcgaacttccattcagtcattgaggacttttctgacttctgggaaagcgaagtaccacgaataggtgagggcaatgccaaaggttggcgtcactttgttgaagacgtgggcgctatgaccgacccaccagaagcaataccaagggagccatcaggacctcctcagacgagggatccatttgaggcatgggcgttgctggaacgacaagaggcggcaaaggcacgaatgccggctcgtaccctggacgaaggaacagatgatgacccattccgaatcgtcatgttttcggatatcaaggatttggtgttgtggatcccatcccaaatgctcccgcaggcacagcttcagctagttgatgcctttttgacattctgtcgacttccaaataccgcgaaatcttctgcgctgaaagatcccttcattgcgcctcgtggacaagcctttgaatctttgctggatcaaataggcggccacgatgttttgaattcggtggagatagagcgaaagccaccattattcgggcaacaaggtggaaacatggctctctcaccagaactccttttttccgggcaggactggtttcagtatctcggtcaatggtctagtctcagcatagatgcggatggtgatgttaggcctccctgggtactcgagacactccattatctggtccttacttgcggtattgaacaactggccgagtactatctggcattggcatggcttagtgaacctttgggggttaagaaggtcgccaaggggctgctgaaacggtactcatccaacacgagactatataatgcctacgccatgattgaatttgcaaacggaaacattggcattgccgaaaaggtactactctcggcaacaagccaaagttcccccgatagccagctattatggaacacctgggtatggatgcacctgaacgcaggaaacatgcaactcgctctgcttcggctgttgtcttctgtggacattactctagacgtggagaagggcttgccggtatcgccagctctgctcctaaaagcaagagctcacttttctaccaagcgagactactccctctcttctcaccaaacagaaccggcactccaatatgccgaaagccttgctcttctcgactacctctcaagaaccgagaacagcagcggcagcacaaagtactcaagccaaggcaacatcacctctgctctcgcaaacatacaatctttcactaccgagctgagctccctaggtcaccaaaccctccacgaacgactcctccaaatcggcgctcgccttctctaccaccacgcaaatcacggcccttacaagccttccaccctacgccaatatcttcacgaattcctccgtctcttcccccacaacacgctctttctctcccttctcgcctgggcagagcaatccactctccggatcagcgaccccgtccgctccattgtgcgcgaaagcttgtcctcaaccagagacaaggacaccagcagctcagaaggtagtcacacaccagtaccaatccccacctaccgtttcgcaatcgaatacgagctcctctccggcgccggcctcaggcccgtcggcgccgcaacaatccattccaccaaagccgctttcgaagccgccgtttcggatccctctgcatgcagatataatgtggacatatggatcggttacattcgattcttgacgcaggtgtactttcatgcactttctttatcctacggatcctctgccacggcagggacccgggagcgtggtataaagaaggcggatgcgcaggcggcgagcacccttaaggctcttaaggatgtgttttacagagccgttgccgcctgtccgtggagcaagaagctttatatggcggcgttccctgctggttctactgcagagcctggagagcctggtgagggcgggggcagcgcattggtgaaagccttgagcagtggggagttgagggcggtgtttgggacgatggttgcgaaggggttgagagtgcatgttgattttgaggggtttgagaggaagtggagggaaaaggaagaagacgaaaagagggtggggagggagaaggagaaggttgagaaggaggagaaggaggaatcggagaggagagcgaggctggaacgggagagacgatgggatttagaagattcgcttcataaaaatcgccatatggactcggataggggtgaaaggggagggggacaatacgaaaagtacaatgatcgtgagaggagtagagagtgggatagacggagggagggagggaggagatgattgctgattctactggagcaaaagtagcaatggcggccgtagcaggcaccgcagtagacataacgggaatttgtcaacttggtatggctgacttggccgcatgtgcctcagttggaccaattgtaacaagcgtaagtagttaggtatcttgaaaaagaaaataattcatagtctgaatggtgtgggaggaagataggtaactgcaggtgcccttttcggctccttgatctaaacgacgatggatattct
//
by
@meso_cacase at
DBCLS
This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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