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2025-04-02 18:12:08, GGRNA.v2 : RefSeq release 228 (Jan, 2025)

LOCUS       XM_062768745            1925 bp    mRNA    linear   PLN 06-FEB-2024
DEFINITION  Vanrija pseudolonga Calnexin (ARB_00147), mRNA.
ACCESSION   XM_062768745
VERSION     XM_062768745.1
DBLINK      BioProject: PRJNA1072635
            BioSample: SAMN23076029
KEYWORDS    RefSeq.
SOURCE      Vanrija pseudolonga
  ORGANISM  Vanrija pseudolonga
            Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina;
            Tremellomycetes; Trichosporonales; Trichosporonaceae; Vanrija.
REFERENCE   1  (bases 1 to 1925)
  CONSRTM   NCBI Genome Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-FEB-2024) National Center for Biotechnology
            Information, NIH, Bethesda, MD 20894, USA
REFERENCE   2  (bases 1 to 1925)
  AUTHORS   Noh,H.
  TITLE     Direct Submission
  JOURNAL   Submitted (04-OCT-2023) Department of Microbiology, Dankook
            University, 119 Dan-daero, Dongnam-gu, Cheonan-si, Cheonan 31116,
            South Korea
  REMARK    Annotation added by submitter
REFERENCE   3  (bases 1 to 1925)
  AUTHORS   Noh,H. and Kim,S.H.
  TITLE     Direct Submission
  JOURNAL   Submitted (12-NOV-2021) College of Natural Sciences, Dankook
            University, 119 Dan-daero, Chenan 31116, South Korea
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. This record is derived from an annotated genomic
            sequence (NC_085850).
FEATURES             Location/Qualifiers
     source          1..1925
                     /organism="Vanrija pseudolonga"
                     /mol_type="mRNA"
                     /isolate="DUCC4014"
                     /isolation_source="Shiitake mushroom"
                     /db_xref="taxon:143232"
                     /chromosome="2"
                     /geo_loc_name="South Korea: Gwangju"
                     /collection_date="2015-06"
                     /collected_by="Seong Hwan Kim"
     gene            1..1925
                     /gene="ARB_00147"
                     /locus_tag="LOC62_02G002236"
                     /db_xref="GeneID:87805484"
     CDS             109..1758
                     /gene="ARB_00147"
                     /locus_tag="LOC62_02G002236"
                     /codon_start=1
                     /product="Calnexin"
                     /protein_id="XP_062624729.1"
                     /db_xref="GeneID:87805484"
                     /db_xref="GO:0005509"
                     /db_xref="GO:0005515"
                     /db_xref="GO:0005783"
                     /db_xref="GO:0006457"
                     /db_xref="GO:0051082"
                     /db_xref="InterPro:IPR009033"
                     /db_xref="InterPro:IPR013320"
                     /db_xref="InterPro:IPR018124"
                     /db_xref="PFAM:PF00262"
                     /translation="
MRPQNVVTAAGTGALILAASASASEVTFKPTTLKAPFIEQFVEDLGPDSRWTVSQATKQTPVGDETFSYVGTWAVEEPEVFPGIKGDKGLVLKSKAAHHAISTVFEKPIETKGKPLVVQYEVKLQKGLECGGAYLKLLSEQGEKEGLRAGEEYTDKTPFTVMFGPDRCGSTNKVHFIFRHKNPVTGVFEEKHYNSPPLPKITKTTALYTLIINPDNTFSIKINDEEVSTGNLLEDFTPAVNPDAEIDDPEDFKPADWVDIAEIDDVEAVKPDDWDEDAPLTIVDVEAVKPEDWLDDEPIEIADPEAEKPEEWDDEEDGDWVAPTVPNPKCQEASGCGDWQPPKIRNPDFKGKWVRPKIANPEYKGVWAPAKIPNPDFFEDKNPAALTPIGGLGFELWTMTEDILFDNIYIGHDVAQAEEFAKETFYVKRPIEQEAEGSAPEEDDSIPTTVVDKIRLRLLEFVALAQIDPLDAAKQLPEVAAGIVAAFFTFLALLGGLFGLFKSGGSAAKKPTVVKKSTVKAAPAPEAKIEEIKEDDSAAKKRTTRSSKE"
ORIGIN      
ccactttcaaagcactcaccactgctactactaaaacgccattgcgcctttgagctcaccactcactagtgctctctcgtctcgtctaccaacccgtcgaaagaaagaatgaggcctcagaacgttgtcaccgccgccggcaccggcgccctcatcctggccgcctcggcttctgcctccgaggtcactttcaagcctaccaccctcaaggctccgttcattgagcagttcgttgaggacctcggccccgactcgcgctggaccgtctcgcaggcgaccaagcagacccccgtcggtgacgagaccttctcgtacgtcggcacctgggccgtcgaggagcccgaggtcttccccggcatcaagggcgacaagggtcttgttctgaagtccaaggctgcccaccacgccatctcgaccgtcttcgagaagcctattgagaccaagggcaagcccctcgttgtccagtacgaggtcaagctccagaagggcctcgagtgcggtggtgcctacctcaagctcctgtcggagcagggtgagaaggagggtctccgcgctggcgaggagtacacggacaagacccccttcacggtcatgttcggccctgaccgctgtggctcgaccaacaaggtccacttcatcttccgccacaagaaccccgtcactggtgtctttgaggagaagcactacaactctcctcctcttcctaagatcaccaagacgacggcgctctacaccctcatcatcaaccccgacaacaccttctcgatcaagatcaacgacgaggaggtctcgactggcaacctccttgaggacttcacccccgccgtcaaccccgacgccgagattgacgaccccgaggacttcaagcccgccgactgggttgacattgccgagattgacgacgtggaggctgtcaagcccgacgactgggacgaggacgccccgctcaccattgtcgacgtcgaggctgtcaagcccgaggactggctcgacgacgagcccattgagattgccgaccccgaggccgagaagcccgaggagtgggatgacgaggaggacggagactgggtcgcccccactgtccccaaccccaagtgccaggaggcgtctggctgtggtgactggcagcctcccaagatccgcaaccccgacttcaagggcaagtgggtccgtcccaagatcgccaaccccgagtacaagggtgtttgggccccggccaagattcccaaccccgacttcttcgaggacaagaaccctgccgccctcacccccattggcggtcttggctttgagctctggaccatgaccgaggacattctctttgacaacatctacattggccacgacgttgctcaggccgaggagtttgccaaggagaccttctacgtcaagcgccccattgagcaggaggctgagggctcggctcccgaggaggacgactcgatccctaccaccgttgtcgacaagatccgcctgcgcctcctcgagtttgtcgcccttgcccagattgaccctcttgacgctgccaagcagcttcccgaggtcgccgctggtatcgtcgccgccttcttcaccttcctcgctctcctcggtggtctctttggcctgttcaagtctggtggctctgctgccaagaagcccactgttgtcaagaagtctactgtcaaggccgcgcccgctcccgaggccaagattgaggagatcaaggaggacgactctgctgccaagaagcgcaccacgcgcagcagcaaggagtagggtgtgtcttgactcgttgataccctccctccctcctccctccctcccctcactgatgggctgtggtcgtggtggaccaagtagcccatctgtagccgctctagtcattgcgggggcgctgcggcgtctctgcgcgctctgaagatcatgcatattcacttcatttg
//

by @meso_cacase at DBCLS
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If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596. [Full Text]