LOCUS       XM_062440246            4048 bp    mRNA    linear   VRT 22-JAN-2024
DEFINITION  PREDICTED: Scomber scombrus NRDE-2, necessary for RNA interference,
            domain containing (nrde2), mRNA.
ACCESSION   XM_062440246
VERSION     XM_062440246.1
DBLINK      BioProject: PRJNA1066234
KEYWORDS    RefSeq.
SOURCE      Scomber scombrus (Atlantic mackerel)
  ORGANISM  Scomber scombrus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Pelagiaria; Scombriformes; Scombridae; Scomber.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_084988) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_963691925.1-RS_2024_01
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 01/18/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4048
                     /organism="Scomber scombrus"
                     /mol_type="mRNA"
                     /db_xref="taxon:13677"
                     /chromosome="19"
     gene            1..4048
                     /gene="nrde2"
                     /note="NRDE-2, necessary for RNA interference, domain
                     containing; Derived by automated computational analysis
                     using gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 2 Proteins"
                     /db_xref="GeneID:134000772"
     CDS             1..3588
                     /gene="nrde2"
                     /codon_start=1
                     /product="nuclear exosome regulator NRDE2"
                     /protein_id="XP_062296230.1"
                     /db_xref="GeneID:134000772"
                     /translation="

MALFPAFAGVSDDTKVEDSSKDWLKNKSFQSRDALSLHSRFLEKTDETLNEKDSSVDRDVEESDVPPKKKKKKSEKHRKKKKKHKKKSGRYSDCSGSDSEIIFPSDLKKEQEADRPKDAPLSSRFSWLDDLQSPTLQPFCVDSKPDAANWTYKSLYRGDVARYRRKGRSSLGLDSRRQEVSWEESESNKKQKGGDKKKNADRYFSTVSRQLVRSQHPIPTLPTIPECGDVTSPTSFIPLGDDEGENKGGETGGRVHTSLVNPLGVYDSSTALWLQGKGQQNQTEHDKQDKQTEQGAKLLAGRTEEFNRRLREEPGDTQLWIQFIRYQDELSATAFTGEEEQQGADSAERRKSSYRAILEKKLSIAERAVATNPGCIALQLERLKICQELWEPSALAKEWKKLVFLHPNSSPFWREYLMFTQSYFSNFTVAKVNSAYGKCLSTLSVVRDGSMVSHPALPGIEEDMLDIFTQQCHFLRQCGHSEKAISLFQAMIDFTFYKPESVQKMSTKQQIEFFEPFWDSGEARVGELGARGWKAWMLQQERGGWLQPSAEEEEEEEEDGEEVKDPSQPRWTVWLDVESSREAADWLPWRPDKTKGQSEEDCDDPDRQVLFDDIGSSLIHLSSPELRLRLLLNFLSFLGLPVNSAAPCQQLAVLLEDLSLFTQGNDPRRPLTSHDLPGPGVNSVGHMTTLQGTRKQAGLGKHGELFITNVFSMVQPVLPANHRAVLSLSWMQYEKLKVLRCLRCSNKKRLRSQGKSSKRVAKRLLKETDNRSSLVLWREYAHLEWMLGNLDEARKVFSTATAIGGTKGLSSPTLCELCLLWAQLETEDGASVRGGGLSDVTASPAVCVLTRLAEGTSSSSSSQSLTPVSILKARKSYEQALTASLSALDQDLHNPQANKKGQEDVLEDKLSLRGLVGCYALFQYLTVGIQAAHAVYIQARGRMEELHRTLTLDSSNEETNHVSTDASHSAAASSPTSRHRVKKLASECETLAVQHASLLKHHNSVSVFPLATLRQTLTSALSTWSSSAPLWSIYVQVENRYHSAGRARRFFHSVSKDNSSVVPRLFAIVAEQQRKQLVDAAQRSCCNDAALPILPENGLSNRIRGLFESSIATEMGAHCSLLWRMYMHFLVSEGKVDKANGIFYRALQNIPWSKGLYMDAVQLFPDQLQEFVDLMTEKELRVRLPLEELDILLED"

ORIGIN      

atggcgctgtttccagcttttgcaggagtttcagacgacactaaagttgaagattcgtctaaagactggctgaaaaataagagttttcagagcagggatgcactctctcttcacagtcgctttttagagaaaacagatgagacactgaacgagaaggactcaagtgtagacagagatgtggaagaaagtgacgtgccacccaagaagaagaaaaaaaagagtgaaaagcacagaaaaaagaagaaaaaacacaaaaagaagagcgggaggtattccgattgcagcgggtcggactcagaaatcatttttcccagtgacctcaaaaaggaacaagaggcagataggcccaaagatgctccgttatccagtcgtttctcctggttggatgacctccagtctcccacactgcagccgttctgtgtggacagtaaaccagacgctgctaactggacgtacaagtctctgtacagaggagacgtagcgaggtataggaggaaaggcaggtcgtctttaggtctggactcgcgcagacaggaagtcagctgggaggagtcggagtccaataagaaacagaaaggtggcgacaagaaaaaaaacgcagacagatacttctctacagtcagccgccagctggtcaggtcccagcaccccattcctacattaccgacaattcccgaatgcggcgatgtcaccagccccacctcgttcatccccctgggtgatgacgagggggagaacaaaggaggagagacaggtggaagagtgcacacgtccttagtaaatcccctcggtgtgtacgactcctccacggctctgtggctgcaggggaagggacagcagaaccagacggagcacgacaagcaggacaaacagacggaacagggcgctaagcttttggccgggaggaccgaagagtttaacaggaggctcagagaagagccgggagatacacagctgtggatacaatttatacgataccaggatgagctcagcgcaacagcgttcacaggcgaggaggagcagcagggtgcagattcagctgaacgcaggaagtcttcttaccgagccatcctggagaaaaagcttagcatcgcagagcgcgccgtggcaaccaacccgggctgcatcgctctccagctggagaggctcaagatctgccaagagctgtgggagccatcagctctggctaaagaatggaagaaactggtgttcctccaccctaacagttccccattttggagggagtatctgatgttcacacagagctacttcagcaacttcactgtggcaaaagtcaactctgcttacgggaagtgtctgagcacgctcagcgtcgtgcgggacggcagcatggtctctcacccggctctgcccgggatcgaggaggatatgttagatatcttcacccagcagtgtcacttcctgcgtcagtgtggccactcagagaaggcgatttctctgtttcaggccatgatagacttcactttctacaaacctgaaagcgtacaaaagatgtccaccaagcagcagattgagttcttcgagccgttttgggacagcggggaggcgagggttggggagttgggggccagaggctggaaagcctggatgctccaacaagaaagaggagggtggctacagcccagtgcagaagaagaagaggaggaggaagaagatggagaggaggtgaaggatccgagccagcccagatggacagtctggctggatgtggagtcgtctcgcgaagcagctgactggttaccttggagacctgataaaaccaagggccaatcagaagaggattgtgacgacccagacagacaggtgttgttcgatgacatcggttcatccctaattcatctgtcttcaccagagctccggctccgtcttctcctcaatttcttgtcattcctggggcttcctgtgaactctgctgccccctgtcagcagcttgccgtgctgctggaggacctttcactattcactcagggtaacgatccccggcgtcccctgacctcccacgacctacctggccccggggttaactctgtcggtcacatgaccactcttcagggaaccaggaagcaggcggggcttggaaagcacggcgagttgttcatcaccaatgtgttcagtatggttcagcctgtccttcctgccaaccacagagctgtcctatccctcagctggatgcagtacgagaaactcaaggtcttacgttgcctgcgctgcagcaacaagaaacgtctccgctctcagggcaagagcagcaagcgggtcgccaaacgactgctcaaagaaaccgacaaccgctcatcgttggtgctgtggagggagtacgcccacctggagtggatgctgggcaaccttgatgaagctcgcaaagtgttctccacggcaacggcgatagggggaaccaaaggactgagcagccccaccctctgtgagttgtgtctgctgtgggcccagctggagacggaggacggagcaagtgtgcgtggagggggactaagtgatgtaaccgcatccccggctgtgtgtgtactaaccaggctagcagaaggaacctcctcctcatcatcctcccagtccctcactccggtttccatcctgaaggccagaaagtcatacgaacaagctctgactgccagcttgtcagcactggaccaagacctccacaaccctcaggccaacaaaaaaggtcaagaggacgtactagaagacaagctgagtttgagaggtttggtaggctgctacgctctgttccagtacctcacagtgggcatccaagcggctcacgctgtctacattcaggcaagagggaggatggaggaactgcaccgcacgctaacacttgacagcagtaatgaggaaaccaaccatgtcagcactgatgccagtcactctgcagctgcttccagccctacgagccggcaccgtgttaaaaaactagcttctgagtgtgagacattagcagtgcagcacgcatcattgctcaagcaccacaacagtgtcagcgtgtttccactggcaacgctgagacagacgctgacctctgccctttcaacttggtccagcagcgcccctctctggagcatatatgtacaggtggagaaccgttaccatagcgctggccgggcgcgtcgcttttttcactctgtttccaaggacaacagcagtgttgtgccacgcctctttgccattgttgctgaacaacaaagaaagcagctggtggacgctgctcagaggtcttgttgcaatgacgccgccttgcccatcctgccagagaatggccttagcaaccgtatccgtggactgtttgaaagctccatagcaacagagatgggtgctcactgttctttactttggaggatgtacatgcacttcctggtgtcagaagggaaggtggataaagccaatgggatcttctacagggctttacagaatattccctggtctaagggtttgtacatggatgcagtgcagctgttccctgaccaactgcaggagtttgtagatctgatgacagagaaagaactacgagtcagactgcctttagaagaactggatatactactggaggactgaacacacacacacacacacacacacacacacacacacacacacacacaccttgctgtagagctcagtttgagtttgcttcactggcaacatgcccacccacatattggcacactttgatggcaacagcaggacacacacacaaactcagatggttacacacacatagctgcagtattcaacagtgaagttgcagtgatctgatccacagatgagcaatgggccattttttatatgtctgaagatactttattttcaaagcaaaccattatgactgtgtttttactagatcattttgtcaataaaaatctaatattcatataagtgctacagttgtgtttatacataatctgatgaacatacaaactgaggttggacacctgtgttgtaaacaatatctctatgaaatgtgattgcaaagagcacgtcaacatttgagtcaaataaaagaaatgtaaacaaa

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