LOCUS       XM_061253968            3769 bp    mRNA    linear   VRT 04-DEC-2023
DEFINITION  PREDICTED: Conger conger NRDE-2, necessary for RNA interference,
            domain containing (nrde2), mRNA.
ACCESSION   XM_061253968
VERSION     XM_061253968.1
DBLINK      BioProject: PRJNA1046555
KEYWORDS    RefSeq.
SOURCE      Conger conger (European conger)
  ORGANISM  Conger conger
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Anguilliformes; Congridae;
            Conger.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_083760) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_963514075.1-RS_2023_11
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 11/30/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3769
                     /organism="Conger conger"
                     /mol_type="mRNA"
                     /db_xref="taxon:82655"
                     /chromosome="1"
     gene            1..3769
                     /gene="nrde2"
                     /note="NRDE-2, necessary for RNA interference, domain
                     containing; Derived by automated computational analysis
                     using gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 3 Proteins"
                     /db_xref="GeneID:133136462"
     CDS             55..3549
                     /gene="nrde2"
                     /codon_start=1
                     /product="nuclear exosome regulator NRDE2"
                     /protein_id="XP_061109952.1"
                     /db_xref="GeneID:133136462"
                     /translation="

MALFPAFAGLSSGNSNNEKQSKELDWLNNQSFSTDDALSLHQRAVELAEPGSQTSEISFPAVQKQRHRKEDEEDLKAKKRKKKEKKKKEKKHKKRSRAASESSGCDSDTVYPSDLLKQATDPCRQEEEECVSGSFVWLDDLQTPTDRPFCIDRKADSANWEYKSLYRADIARYRRKGSSALGLNPKTQSVSWVEPGSEKKADRKTDRRPERYYSRGARQLLSSRGLPARPGLPGPEASIVPAHFIPVPPCTEQEGQAIPQGTSWVNPLGVYDPSTSLWLQGKGPAEHEKQQEAGPPGAGGAGSACSQLAVRVEHFNRRLRENPTDTPTWLEFVRFQDELTGGAGSFTGLEGEPDGRRKSLRMTLEKKVSILERALESNPTSVELKLARLTLCQELWEPATLLKEWKKLVFLHPNDAPLWRRYLLFTQSQFSTFTVSKVNAVYGKCLSTLASVQDGSMLSHPAQPGTEEAMLEIFLQQCHFLRQAGHSEKAVSLFQAMLDFTFFKPDSVRELPTRQQVEFFEPFWDSGEPRIGEKGARGWKAWMHQQERGGWLVPNDPEDDDDDEEDSSEVKDKSWPKWRIWLDVEASRESNHWLPWRPDKSKGQTEEDCEDPDRQVLFDDLGPSMIRLCSPELRFQLVGSFLQFLGLPGEGWYQGPSWSCLLDNTSLLEEGPDAERPLTSSLLRHTGVGPVGHMTPLGSARRQTGLCKEGEEFVQLVLQQVTPLCSSREKALLSLYWIQYEKLKVMKCVQSRNKKRLKSQGKRSKKLAKRLLKEEENRGNLALWREYAHLEWLLGNLEEGRKVFDTAMALGVARGLKDPELCRLCLLYAQLEAEEARGGASPCTSSAAVYVLTKLAEGGAYAPFSGLVPPVAVLKARKSYEQAVQAALDRKAGSTNAGKNARVAELVGCFALFQYLTTGVEAATSVFSQALERLEGSGAPEDGASSDSSAWGPPSELESLCVMRALLLQHHTSTSVYPLRQLRETLTTALSSFPTNPLLWQLYLRLEKRFHSAGRARRFFHTVTKSIQSVTPQLFAICAEQRRKELVNSAVRADCYGEVFSSMPENGLSHRIRALYEKAVASEHGAHCPLLWRMYLRFLVSEGNLERGSGILYKALQEIPWVKGLYMDAVQLFPDRVQEFLDLMTEKELRLRVPMEEVDILLED"

     polyA_site      3769
                     /gene="nrde2"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      

gtttaaaatacacgccatcgtaaatacaaattggaaggttcacgttcttaagccatggcactctttccagctttcgcaggattgtcaagtggaaattcaaataatgaaaaacaatctaaagaattggattggttgaacaatcagagtttcagcaccgatgatgccctgagcctccatcagcgagccgttgagctagctgagccggggtcacagacctctgaaatcagttttcctgctgtccaaaagcagaggcacagaaaggaggatgaagaagatctcaaggcaaagaaacggaaaaagaaggaaaagaagaagaaggagaagaaacacaaaaagaggagcagagcggcatcggaaagcagtggctgtgactcggacaccgtgtatcccagtgacctcttgaaacaggctacagacccctgcaggcaggaggaggaggagtgcgtttctggctccttcgtctggctggacgacctccagacccccaccgaccggccattctgcatcgacaggaaagcggactctgccaactgggaatacaagtccctctacagagcagatatcgccaggtacagacggaaagggagctctgccctcggactgaacccaaagacccagagtgtgagctgggtggagcccggctcagagaagaaggcagacaggaagactgacagaaggccggagagatactactcccgcggggcccgccagctgctcagctccaggggcctccctgcccggcctggcctcccggggcccgaggcgagcatagtccctgcccacttcattccagtccctccctgcaccgagcaggaggggcaagccatcccccaaggcacctcctgggtcaaccccctgggggtgtacgacccctccacctccctgtggctccagggcaagggcccggcggagcatgagaagcagcaggaagcggggcccccaggggccggcggggccggcagcgcctgttcccagctcgctgtccgagtggagcacttcaacaggaggctgagggagaaccccaccgacactcctacctggctggagtttgtacgcttccaggatgagctgacgggcggtgcagggtccttcacgggtctggaaggcgagccggacggacgcaggaagtccctgaggatgaccctggagaagaaggtgtccatcctggagagggcgctggagagcaaccccaccagcgtggagctgaagctggcccggctgacgctgtgccaggagctgtgggagccggcgaccctgctgaaggagtggaagaagctggtcttcctgcaccccaacgacgccccgctctggaggaggtacctgctcttcacccagagccagttcagcaccttcaccgtgtccaaggtcaatgccgtctacgggaagtgtctgagcacgctggcgtccgtgcaggacggcagcatgctctcccaccccgcccagcccggcaccgaggaggccatgctagagatcttcctccagcagtgccacttcctgcggcaggcggggcactcggagaaggccgtctcactcttccaggccatgctggacttcaccttcttcaagcccgacagtgtgagagagctccccaccagacagcaggtggagttctttgagcccttctgggacagtggggaaccccggattggagagaagggggctcggggctggaaggcctggatgcaccagcaggagagagggggctggctggtgcccaatgacccagaagacgatgatgacgatgaggaagactcttctgaggtgaaggataagagctggcccaagtggcggatatggttggacgtggaggcatcccgcgagagcaatcattggttgccttggagaccggacaagtccaagggccagacagaagaggactgtgaggatcctgacagacaggtcctgttcgatgaccttggcccgtccatgatccggctctgctccccagagctcaggttccagctggtgggctccttcctccagttcctgggcctgcccggggagggctggtaccaggggccgtcctggagctgcctgctggacaacacatccctgctggaggagggcccagacgcggagcggcccctgacctccagcctcctccgccataccggggtcggccccgtgggtcacatgaccccgcttggcagcgccaggaggcagacgggtctgtgcaaggagggggaggagtttgtgcagctcgtcctgcagcaggtcacacccctgtgctcctcgcgggagaaagcgcttctctctctctactggatacagtacgagaagctcaaggtgatgaagtgtgtccagagcagaaataagaagcgactgaagtctcagggaaagaggagtaaaaagctggccaagcgcctgctgaaggaggaggagaaccggggcaacctggccctatggcgggagtacgcccacctggaatggctgctgggaaacctggaggagggcaggaaggtgttcgacacggccatggccctgggtgtggcccggggcctgaaggacccggagctgtgccgcctctgcctgctctatgctcagctggaggcggaggaggcccggggcggggcgtctccctgcacctcctccgcggcggtgtatgttctgaccaaactggccgagggcggggcctacgcccccttttccggcctggtgcccccggtggccgtcctgaaggcgcggaagtcctacgagcaggccgtgcaggcagccctggaccggaaggcggggtccacgaatgctgggaaaaacgcccgcgtggcggagctggttggctgtttcgcgctcttccagtacctgaccacgggagtggaggccgccacgagcgtcttcagccaggccctggagaggctggaggggtctggggcccctgaggacggggcctcctctgactccagtgcctggggccctccctctgagctggagtctctgtgcgtcatgcgagccctcctgctgcagcatcacaccagcaccagcgtgtaccccctgcgccagctccgggagaccctcaccacagccctctccagcttccccaccaaccccctgctctggcagctctacctgcggctggagaagaggttccacagcgccgggagggcgcgtcgcttcttccacaccgtcaccaagagcatccagagcgtcacgccccagctgttcgccatctgcgccgagcagaggaggaaagaactggtcaactcggcagtgagggctgactgttacggggaggttttctccagcatgccggagaacgggctcagccacaggatccgggctctgtatgagaaagccgtggcctctgagcacggggcccactgccctctcctctggaggatgtacctccgcttcctggtatcagaggggaacttggagagaggtagcggcatcttgtacaaagcccttcaggaaatcccgtgggtgaagggcctgtacatggacgcggtgcagctcttccccgaccgcgtgcaggagttcctggacctgatgacagagaaggagctgagactgcgggtgcccatggaggaggtggacatcctgctggaggactgaggccctggtctggccccggtcacagttctggggccctgaaacgcctatggccctcaaaatcatgcgtgaaaaaagactagcttttattgggagaggttttgttttgtatatctgaaagaatgatgtgtagtttatgtgtatatattaaagtatattttgcctacctcttggaatattctgtaaataacctttgtctattaaaagcaatgtctttctgtaa

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