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2024-05-05 09:36:17, GGRNA.v2 : RefSeq release 222 (Jan, 2024)

LOCUS       XM_060599809            1503 bp    mRNA    linear   PLN 01-NOV-2023
DEFINITION  Cutaneotrichosporon cavernicola uncharacterized protein
            (CcaverHIS019_0400210), partial mRNA.
ACCESSION   XM_060599809
VERSION     XM_060599809.1
DBLINK      BioProject: PRJNA1032435
            BioSample: SAMD00597898
            Sequence Read Archive: DRR469473
KEYWORDS    RefSeq.
SOURCE      Cutaneotrichosporon cavernicola
  ORGANISM  Cutaneotrichosporon cavernicola
            Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina;
            Tremellomycetes; Trichosporonales; Trichosporonaceae;
            Cutaneotrichosporon.
REFERENCE   1
  AUTHORS   Kobayashi,Y., Kayamori,A., Aoki,K., Shiwa,Y., Fujita,N., Sugita,T.,
            Iwasaki,W., Tanaka,N. and Takashima,M.
  TITLE     Chromosome-level genome assemblies of Cutaneotrichosporon spp.
            (Trichosporonales, Basidiomycota) reveal imbalanced evolution
            between nucleotide sequence and chromosome structure
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 1503)
  CONSRTM   NCBI Genome Project
  TITLE     Direct Submission
  JOURNAL   Submitted (01-NOV-2023) National Center for Biotechnology
            Information, NIH, Bethesda, MD 20894, USA
REFERENCE   3  (bases 1 to 1503)
  AUTHORS   Kobayashi,Y., Kayamori,A., Aoki,K., Shiwa,Y., Fujita,N., Sugita,T.,
            Iwasaki,W., Tanaka,N. and Takashima,M.
  TITLE     Direct Submission
  JOURNAL   Submitted (05-JUN-2023) Contact:Yuuki Kobayashi Tokyo University of
            Agriculture, Research Institute for Agricultural and Life Sciences;
            Sakuragaoka 1-1-1, Setagaya, Tokyo 156-8502, Japan
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. This record is derived from an annotated genomic
            sequence (NC_083396).
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..1503
                     /organism="Cutaneotrichosporon cavernicola"
                     /mol_type="mRNA"
                     /strain="HIS019"
                     /culture_collection="CBS:9981"
                     /culture_collection="JCM:12590"
                     /type_material="holotype of Cutaneotrichosporon
                     cavernicola"
                     /db_xref="taxon:279322"
                     /chromosome="4"
                     /country="Japan"
                     /collection_date="2003"
     gene            <1..>1503
                     /locus_tag="CcaverHIS019_0400210"
                     /db_xref="GeneID:85495071"
     CDS             1..1503
                     /locus_tag="CcaverHIS019_0400210"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_060456466.1"
                     /db_xref="GeneID:85495071"
                     /translation="
MTDRRASKDRGIAAPGLTGLANTTGRFFTSGAKELARTKYGKSVGSFITATNARPSSTSPKPQKQYGTAHAVPPTTVHTIHAPPPSTYGPPAPNNCTNVYQTPYNQNQPGQSQYQQPYLQQPGFNVAPPNQFNSPPQTLNTSPPLQFNSPPQTLNTSPPLQFNSPPQTLNTSPPQQFNSPPQTLNSSPPLQFNSPPNQFAPPPNQNQPSFPPPTQNQNQGLSPPPPKPSLLSNPSFTQGFQDGYSQYKPPVQQNEGFQHTGQMPQHSPQMPHQHTGSSLPHQSTGPVHQHMGSISQPSGIGLPYQPSGPQPQPQPQPHANSYPQPGHAPYQPLQESPMYTAINSPPAYSPELSPPTQYKPHGGDPGQPWYQPWAGGSPQSSMSVQSISSPPISPPLMTPPAVMVFAEPQSYYAPPQQQQQQQQQPLVQPVYVQPAYAYQPVLPGQAIPPGAIPVYGNAPTVGGGGGGGGGKPQKESKMSKLNDTMGVVSSGTQIISTFTS"
ORIGIN      
atgacagaccgccgcgcatccaaggaccgtgggatcgctgctcccggtctgacaggactcgcgaacacgactggccgcttcttcacctcgggcgcaaaggagctcgcaaggacaaagtacggcaagagtgttggttcatttatcacggccaccaatgcgcgtcctagctcgacttcgcccaagccgcagaaacagtacggaacagctcatgcggtgcctccaaccaccgttcatacaatccatgccccaccgcccagcacgtacggtccgcccgcgcctaacaactgcacgaacgtgtatcagacgccgtacaaccagaaccaaccgggccagagccagtaccagcagccttatctgcagcagccggggttcaacgtggccccgccaaaccagttcaactcgccgccgcagaccttgaacacctcgcctcctctgcagttcaactcgccgccgcagaccttgaacacctcgcctcctctgcagttcaactcgccgccgcagaccttgaacacctcgcctcctcagcagttcaactcgccaccgcagaccttgaacagctcgcctcctctgcagttcaactcgccgccgaaccagttcgctccgcccccgaaccagaaccaacccagtttcccgccgcccacgcagaaccagaaccagggcttgtcccctcctccaccgaaaccgagcctcctcagcaaccctagtttcacgcagggcttccaggacggctactcacagtacaaaccaccggtccagcagaacgagggctttcagcacacaggacagatgccccagcactctcctcagatgcctcaccagcacacgggatcgtcgctgccacaccagagcaccggacccgttcaccagcacatgggctcgatatcccaaccgagcggcatcggcctgccgtaccaaccatctgggccgcagccgcagccgcagccgcagccacacgccaactcgtacccccagcctgggcatgctccataccagccgctccaggagtcgccaatgtatacggccattaactcgcctccggcgtactcaccagaactcagcccgccaacgcagtacaagccgcatggcggtgaccccggccagccatggtatcagccgtgggcaggaggttccccacaatcgtccatgtcggtgcagtcgatttcctcgccgccgatatcgcctccgctcatgacgccccccgccgtgatggtgttcgcggagccccagtcatactatgcccccccacagcagcagcagcagcagcagcagcagcctcttgtgcagcccgtgtacgtccagcccgcgtacgcctaccaacccgtacttccgggccaggcaatcccgcccggtgccatccccgtttacgggaatgcgcctaccgtcgggggaggtggcggtggtggtggtggtaagccgcagaaggagagcaagatgtccaagctcaacgacacaatgggcgtcgtgtcgagtggcacgcagatcatctcaaccttcacgagttag
//

by @meso_cacase at DBCLS
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If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596. [Full Text]