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2025-08-29 05:35:30, GGRNA.v2 : RefSeq release 231 (Jul, 2025)

LOCUS       XM_060004964            1513 bp    mRNA    linear   MAM 28-OCT-2024
DEFINITION  PREDICTED: Delphinus delphis Meis homeobox 2 (MEIS2), transcript
            variant X3, mRNA.
ACCESSION   XM_060004964
VERSION     XM_060004964.1
DBLINK      BioProject: PRJNA1022093
KEYWORDS    RefSeq.
SOURCE      Delphinus delphis (saddleback dolphin)
  ORGANISM  Delphinus delphis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha;
            Cetacea; Odontoceti; Delphinidae; Delphinus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_082684) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_949987515.2-RS_2024_10
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 10/25/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1513
                     /organism="Delphinus delphis"
                     /mol_type="mRNA"
                     /db_xref="taxon:9728"
                     /chromosome="2"
     gene            1..1513
                     /gene="MEIS2"
                     /note="Meis homeobox 2; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 13 Proteins"
                     /db_xref="GeneID:132420490"
     CDS             153..1337
                     /gene="MEIS2"
                     /codon_start=1
                     /product="homeobox protein Meis2 isoform X3"
                     /protein_id="XP_059860947.1"
                     /db_xref="GeneID:132420490"
                     /translation="
MAQRYDELPHYGGMDGVGVPASMYGDPHAPRPIPPVHHLNHGPPLHATQHYGAHAPHPNVMPASMGSAVNDALKRDKDAIYGHPLFPLLALVFEKCELATCTPREPGVAGGDVCSSDSFNEDIAVFAKQVRAEKPLFSSNPELDNLMIQAIQVLRFHLLELEKVHELCDNFCHRYISCLKGKMPIDLVIDERDGSSKSDHEELSGSSTNLADHNPASWRDHDDATSTHSAGTPGPSSGGHASQSGDNSSEQGDGLDNSVASPGTGDDDDPDKDKKRQKKRGIFPKVATNIMRAWLFQHLTHPYPSEEQKKQLAQDTGLTILQVNNWFINARRRIVQPMIDQSNRAVSQGAAYSPEGQPMGSFVLDGQQHMGIRPAGPMSGMGMNMGMDGQWHYM"
     misc_feature    480..734
                     /gene="MEIS2"
                     /note="N-terminal of Homeobox Meis and PKNOX1; Region:
                     Meis_PKNOX_N; pfam16493"
                     /db_xref="CDD:465140"
     misc_feature    order(996..998,1125..1127,1134..1139,1146..1148)
                     /gene="MEIS2"
                     /note="specific DNA base contacts [nucleotide binding];
                     other site"
                     /db_xref="CDD:238039"
     misc_feature    1035..1151
                     /gene="MEIS2"
                     /note="Homeobox KN domain; Region: Homeobox_KN; pfam05920"
                     /db_xref="CDD:428673"
ORIGIN      
cccccccctaaaaataacatattggaaaactgggagaagtctccttggtttggaaaaaaaaaaaaaaggaatcttcagcctagatcactttcttatccggactgggatattaaatatacgacacatccaggagtttattggagcgcagactgatggcgcaaaggtacgatgagctgccccattacggcgggatggacggagtaggggtgcctgcttccatgtacggagaccctcacgcgccgcggccgatcccaccggttcaccacctgaaccacgggccgccgctccacgccacgcagcactacggcgcgcacgccccgcaccccaatgtcatgccggccagcatgggatccgctgtcaacgacgccttgaagcgggacaaggacgcgatctatgggcacccgttgtttcctctgttagctctggtctttgagaagtgcgagctggcgacctgcactccccgggaacccggagtggccggcggagacgtctgttcctccgactccttcaacgaggacatcgcggtcttcgccaagcaggttcgcgccgaaaagccacttttttcctcaaatccagagctggacaatttgatgatacaagcaatacaagtactaaggtttcatcttttggagttagaaaaggtccacgaactgtgtgataacttctgccaccggtacattagctgtttgaaggggaaaatgcccatagacctcgtcattgatgaaagagatggcagctccaagtcagatcacgaagaactttcaggctcctccacaaatctcgctgaccataatcctgcatcttggcgagaccacgatgatgcaacttccacccactcagcaggcaccccagggccctccagtgggggccatgcatcccagagtggagacaacagcagtgaacaaggggatggtttagacaacagtgtagcttcacctggcacaggtgacgatgatgatccagacaaggacaaaaaacgccagaagaaaagaggcattttccccaaagtagcaacaaatatcatgagagcatggctcttccagcatctcacacatccgtacccttccgaagagcagaagaaacagttagctcaagacacaggacttacaattctccaagtaaacaactggtttattaatgccagaagaagaatagtacagcccatgattgaccagtcaaatcgagcagtgagccaaggagcagcgtatagtccagagggtcagcccatggggagctttgtgttggatggtcagcaacacatgggaatccggcctgcaggacctatgagtggaatgggcatgaatatgggcatggatgggcaatggcactacatgtaaccttcaccatgtaaagcaatcgcaaagccagggggaagtttgcagagcatgccaggggagtacgtttctcagggtggtcctatgggaatgagtatgggacagccaagttacactcctccccagatgaccccacaccctactcagttaagacatggacccccaatgcattcatattt
//

by @meso_cacase at DBCLS
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If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596. [Full Text]