GGRNA ver.2 Home | Help | Advanced search    Previous release (v1)

2024-04-30 09:00:08, GGRNA.v2 : RefSeq release 222 (Jan, 2024)

LOCUS       XM_059628302             559 bp    mRNA    linear   INV 18-SEP-2023
DEFINITION  PREDICTED: Neocloeon triangulifer ubiquinol-cytochrome-c reductase
            complex assembly factor 2 (LOC132201814), transcript variant X1,
            mRNA.
ACCESSION   XM_059628302
VERSION     XM_059628302.1
DBLINK      BioProject: PRJNA1017488
KEYWORDS    RefSeq.
SOURCE      Neocloeon triangulifer
  ORGANISM  Neocloeon triangulifer
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Palaeoptera; Ephemeroptera; Pisciforma; Baetidae;
            Neocloeon.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_026775556) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_031216515.1-RS_2023_09
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 09/15/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..559
                     /organism="Neocloeon triangulifer"
                     /mol_type="mRNA"
                     /isolate="White Clay Creek 2 clone"
                     /isolation_source="Stroud Water Research Center"
                     /db_xref="taxon:2078957"
                     /chromosome="Unknown"
                     /sex="female"
                     /tissue_type="whole adult flies"
                     /dev_stage="adults"
                     /country="USA: Avondale, PA"
     gene            1..559
                     /gene="LOC132201814"
                     /note="ubiquinol-cytochrome-c reductase complex assembly
                     factor 2; Derived by automated computational analysis
                     using gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 1 Protein"
                     /db_xref="GeneID:132201814"
     CDS             209..559
                     /gene="LOC132201814"
                     /codon_start=1
                     /product="ubiquinol-cytochrome-c reductase complex
                     assembly factor 2"
                     /protein_id="XP_059484285.1"
                     /db_xref="GeneID:132201814"
                     /translation="
MAAYRRFLNLLKKWPLDETKGDKDLGLFLRKLLQEQFPQGEGSKVTEAVWAKKLDGLDKIVQNKHSSEHPLPSNFMSATGLSAEECNRALSREFLKTLATENNKGFFARVLLKEEK"
ORIGIN      
tcgatgatctcaagatgatttcaagaagaaatacagagcgtgcgaagagcaagattttatttatacacaattattaaatattttttctgcccgtgcaattgcaatttgtaaaagagttgaagtaatactagtttgccgcacaattattctacgaacatctgaacataatttgtccgcaaaagttattaaacgcagctgattttcattgatggcagcctataggaggtttctaaacctgttgaagaagtggcctttggacgagacaaagggggacaaggacttgggcctgttcctccgcaaactgctgcaagagcagttcccacaaggagagggttcgaaggtgactgaagctgtctgggccaagaagttggacggcttggacaagattgttcaaaacaagcacagctcagagcaccctctgcccagtaattttatgtccgcgactggtttgagcgctgaagagtgcaacagagccttatcaagagaatttttaaaaactcttgcaacggaaaacaacaagggcttttttgctagagttttgctgaaagaagaaaaataa
//

by @meso_cacase at DBCLS
This page is licensed under a Creative Commons Attribution 4.0 International License (CC BY 4.0).

If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596. [Full Text]