2024-05-17 14:18:19, GGRNA.v2 : RefSeq release 222 (Jan, 2024)
LOCUS XM_059356675 14079 bp mRNA linear VRT 01-SEP-2023 DEFINITION PREDICTED: Centropristis striata golgin subfamily B member 1-like (LOC131991307), transcript variant X2, mRNA. ACCESSION XM_059356675 VERSION XM_059356675.1 DBLINK BioProject: PRJNA1009836 KEYWORDS RefSeq. SOURCE Centropristis striata (black seabass) ORGANISM Centropristis striata Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Perciformes; Serranoidei; Serranidae; Serraninae; Centropristis. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_081518) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030273125.1-RS_2023_08 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 08/29/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..14079 /organism="Centropristis striata" /mol_type="mRNA" /isolate="RG_2023a" /isolation_source="ocean" /db_xref="taxon:184440" /chromosome="2" /tissue_type="muscle, liver" /ecotype="Rhode Island" /country="USA: Rhode Island coast" /lat_lon="41.319322 N 71.500169 W" /collection_date="2021-08-04" gene 1..14079 /gene="LOC131991307" /note="golgin subfamily B member 1-like; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins" /db_xref="GeneID:131991307" CDS 143..13966 /gene="LOC131991307" /codon_start=1 /product="golgin subfamily B member 1-like isoform X2" /protein_id="XP_059212658.1" /db_xref="GeneID:131991307" /translation="
MGKQNFTLLSAEKTQLSLLLKETMQEKTQLQAENNKLRQLLNFTHLENEHNALKLLMNATQCNFTLSAEKTQLSLLLKDTLEEKTQLQEENKELKQLLNFTLPESVHGQLKLLMNTTRCNLTLMSAKENQLKLLLKNALEEKTQLQEENKELKQHLNTTYPNVNFQESEHGQLKLLVNATRYNFTFLSAEKNKLSLLLKNTLEEKTQLQEEYKELKQLLNSTYPNFTLPKCGQLKLLMNSTRYNFTLLSAEKTQLSLLLKNTVQEKTQLQLENKELKQLLNFTFPESEHGQLKLLINATNYNFTLSANKKQLNLLLKNALEEKTQLQEENKELKQLLNSTYPNFTLPKCGQLKLLMNATRYNFTLLSAEKTKLSLVLKETMQEKTHLQEENNELKQLLNLTIPENEYGQLKQLINATKCNFTLLSAEKTQLNLLLKNTVQEKRQLQVENKELKQLLIFTLPENVHGELKLLMNTTRCNLTLVSAKENQLNLLLKNALEEKTQLQEENKELKQLLNSTYPNFTLPKCGQLKLLMNSTRYNFTLLSAEKTQLSLLLKNTVQEKTQLQLENKELKQLLNFTLPESEHGQLKLLINATNYNFTLSAEKKQLNLLLKNALEEKTQLREENKELKQLLNSTYPNFTLPKCGQLKLLMNATRYNFTLLSAEKTKLSLVLKETMQEKTHLQEENNELKQLLNLTIPENEYGPLKQLINATKCNFTLLSAEKTQLNLLLKNTVQEKRRLQVENKELKQLLIFTLPENVHGQLKLLMNTTRCNLTLVSAKESQLNLLLKNALEEKTQLQEENKELKQLVNSTYPNFTLPKCGQLKLLMNAARYNFTLLSAEKTKLSLFLKETMQEKTKLQVEYKELKQLLNSNYPNFTLPKCGQLKLLMNATRYNFTLLSAEKTQLSLLLKNMVQEKTQLQEENKELKHLLNYTYPNVNFPESEHGQLKLLMNATNYNFTLLSAEKTQLNLLLKNTLEEKTQLQEENKELKQLLNSTYPNITLPKCGQLKLLMNATRYNFTLLSAEKTKLSLVLKETMQEKTQLLEECKELKQLLKSTYPNFTLQKCGQLKLLMNATRYNFTLLSAEKTQLSLLLKNTMHEKRQLQVENKELKQLLNFTLPENVHGQLKLLMNTTRCNLTLVSAKENQMNLLLKNALEEKTQLQEENKELKQHLSTTNPNVNFPESELGQLKLLTNATRYNFTLLSAEKTELSLLLKETMQEKTQLQLENKELKQLLNFTLPESEHGQLKMCMNTTQYNFTLLSAEKTQLNLLLKNTLEEKTQLQEENKELKQHLNTTNPNFTLPKCGQLKLLMNATRYNFTLLSAEKTKLSLVLKETMQEKTHLQEENNELKQLLNLTIPENEYGPLKQLINATKCNFTLLSAEKTQLNLLLKNTVQEKRRLQVENKELKQLLIFTLPENVHGQLKLLMNTTRCNLTLVSAKESQLNLLLKNALEEKTQLQEENKELKQLVNSTYPNFTLPKCGQLKLLMNAARYNFTLLSAEKTKLSLFLKETMQEKTKLQVEYKELKQLLNSNYPNFTLPKCGQLKLLMNATRYNFTLLSAEKTQLSLLLKNMVQEKTQLQEENKELKHLLNYTYPNVNFPESEHGQLKLLMNATNYNFTLLSAEKTQLNLLLKNTLEEKTQLQEENKELKQLLNSTYPNITLPKCGQLKLLMNATRYNFTLLSAEKTKLSLVLKETMQEKTQLLEECKELKQLLKSTYPNFTLQKCGQLKLLMNATRYNFTLLSAEKTQLSLLLKNTMHEKRQLQVENKELKQLLNFTLPENVHGQLKLLMNTTRCNLTLVSAKENQMNLLLKNALEEKTQLQEENKELKQHLSTTNPNVNFPESELGQLKLLTNATRYNFTLLSAEKTELSLLLKETMQEKTQLQLENKELKQLLNFTLPESEHGQLKMCMNTTQYNFTLLSAEKTQLNLLLKNTLEEKTQLQEENKELKQHLNTTNPNFTLPKCGQLKLLMNATRYNFTLLSAEKTKLSLLFKNTVQEKTQLQEENKELKHLLNYTYPNVNFPESEHGQLKLLMNATNYNFTLLSAEKTQLNLLLKNTLEEKTQLQEENKELKQLLNSTYPNFTLPKCGQLKLLMNATRYNFTLLSAEKTKLSLVLKETMQEKTQLLEEYKELKQLLKSTYPNFTLPKCGQLKLLMNATRYNFTLLSAEKTQLSLLLKNTMQEKRQLQVENKELKQLLNFTLPENVHGQLKLLMNTTRCNLTLVSANENQMNLLLKNALEEKTQLQEENKELKQHLSTTNPNVNFPESELGQLKLLTNATRYNFTLLSAEKTELSLLLKETMQEKTQLQLENKELKQLLNFTLPESEHGQLKMCMNTTQYNFTLLSAEKTQLNLLLKNTLEEKTQLQEENKELKQHLNTTNPNFTLPKCGQLKLLMNATRYNFTLLSAEKTKLSLVLKETMQEKTQLQEENKELKQLLNLTIPENEYGQLKQLINATKCNFTLLSAEKTQLNLLLKNTVQEKRQLQVENKELKQLLIFTHPENVHGELKLLMNTTRCNLTLMSAKENQLSLVLKETMQEKTQLLEEYKELKQLLKSTYPNFTLPKCGQLKLLMNATRYNFTLLSAEKTQLSLLLKNMVQEKTQLQEENKELKQLLNLTIPENEYGQLKQLINATKCNFTLLSAEKTQLNLLLKNTVQEKRRLQVENKELKQLLIFTHPENVHEELKLLMNTTRCNLTLMSAKENQLNLLLKNALEEKTQLQEENKELKQLVNSTYPNFTLPKCGQLKLLMNAARYNFTLLFAEKTKLSLVLKETMQEKTHLQEENKELKQLLNYTLPENVHGQLKLLMNTTRCNLTLVSAKENQLNLLLKNALEEKTQLQKENKELKQHLNTTYPNANFPEREHGQLKLLVNATRYNFTLLSAAKTELSLLLKETMQEKTQLQLENKKLKQLLNFTLPESEHGQLKMCMNTSQYNFTLLSAEKTQLNLFLKSALEEKTQLQEENKELKQLVNSTYPNFTLPKCGQLKLLMNATRYNFTLLSGEKTQLSLLLKNTMQEKTQLQLENKELKQLLNFTLPENVHGQLKLLMNTTRCNLTLVSAKENQLNLLLKNALEEKTQLQEENKELKQLLNSTYPNFTLPKCGQLKLLMNATRYNFTLLSAEKTKLSLVLKETMQEKTQLQEENKELKHLLNFTLPENVHGQLKLFMNTTPCNFTLLSAELKMFMNTTPCNFTLLSAEKTQLNLLLKNALGEKTQLQEENKELKQLLTRYNLTLQTAKENQLNQLLLLEEKTQLQEENRELKQLLNSTCPNVTFPESNCGQLKLLMKAIHYNFTLLSAENTQLSLLWKDTMQEKTQLQVENNEMKQLLDSTYPDFNLLEIKYGQLKLLLKNTMQEKTQLQVENKELKHLLNYTYQNPTISGNEYDRLHMLMNTTQYNFTLLSAEKSELILLLKETMQEKTQLQEENKELKQLLNSTNPNFTLPKCGQLKLLMNATRYNFTLLSAEKTKLSRLLENTMQEKTQLQVQNKDMKQRLQVCYQNFTFLESEYGQLNLLMLATQYNFTLLSAEKSQLSLLLKNTMQDKNELSLLLKDTLEETTQLQEKNQELKQRLIICYQNFTILESEHGQLKLEINATQSNFTLLSAEKTQQNLLLTDAMQEKTLLQVQNKGQKKLLQICYQNFTLLESEYDHLNLLMHATQNNFTLLSAEKTHLNLLLKNTEQEKTQLNLLLKDTLKEKTQLQDEKTKLEQLLNTNYQKLTLLESEHGQLKLVINATQSNFTLLSAEKTQLNLLLKDTLQEKTLLLEQNKDLKQLLNHTSQKLTLLESECGQLKLVMNATQYNFTLLSAKKSHLNQLLKNTMQDKNELSLLLKDTLEETTQLQEKNQELKQRLIICYQNFTILESEHGQLKLEINATQSNFTLLSAEKNQQNLVLKDTMQEKTLLQMQNKGQKKLLQICYQNFSLLESEYDQLNLLMHATQNNFTLLSAEKTHLNLLLKDTEQEKTQLNLLLKDTLKEKTQLQDEKSELEQVLNTNYQKLTLLESEYGQLNLLMHAIQSNFSLLSAKKTQLQEENKELEQLLNTNYQQLTRLESECGQLKLVINATRYNVTLLSAEKKQLNLLLKNTEQEKTQLNLLLKDTLKEKTQLQDEKSELEQLLNTNYQKLTLLESEHGQLKLVIDATRYNYTLLSAEKKQLNLLLKNTEQEKTQLNLLLKDTEQEKSQLNLLLKDTLKEKTQLQDEKSELEQLLNTNYQKLALLESEHGQLKLVIDATRYNVTLLSAEKKQLNLLLKNTEQEKTQLNLLLKDTEQEKTQLNLLLKDTLKETTQLQDEKSELEQLLNTNYQKLTLLESEHGQLKLVIDATRYNYTLLSAEKTQLSLLLKNTTQERTQLQEENKELDKFLTSMQDKYNLVVEDNRELELLLNKSMSIIHVMSAESKNLQLQLSNEQQTSMQLQAENQHKRSILFSHRLSFLWRYCDKDTLQCSRCLPGWTEYDSRCFFHSRDTQKWENARRTCIDVGGDLAVVLNAQDQAFLTNMTFQYVKNNPNDLVHSVWIGLQDMVKEGSHVWINGKRVHKNLIYWRDKEPNNAIAEWDKERLGQDCVGIVPPKQIGVKNWLKSWDDVVCVGKRHYLCETMALILT"
ORIGIN
tcaaaacagctttgtgacgagactgcaatccagttggcaagtgatagtgattgcgattctgacagtgcttctttgtggagtgactggtgccctctctgctcagataaacaaacaacaaagtttgacagcagaattacatctgatgggaaagcaaaacttcaccttgctgtctgctgagaagacccagctgagccttctcttgaaggagacaatgcaagaaaaaacacagttgcaagcagagaacaacaagctgaggcaacttctgaacttcacccatctggaaaatgagcataacgcactgaagctgctcatgaatgcaacacagtgcaacttcaccttgtctgcagaaaagacccagctgagcctgctgttgaaggacacattggaagaaaaaacacagttgcaagaggagaacaaagagctgaagcaacttctgaacttcacccttccagaaagtgtgcatggacaattgaagctgctcatgaacacaacaaggtgcaaccttaccttgatgtctgcaaaagaaaaccagctgaagctgctcttgaagaatgcattggaagaaaagacacagttgcaagaggagaacaaagagctgaagcaacatctgaacaccacctacccaaatgtcaactttcaagaaagtgagcatggccaactgaagctactcgtgaatgcaacaaggtacaacttcaccttcttgtctgcagagaaaaacaagctgagcctgctcttgaagaacacattggaagaaaagacacagttgcaagaggagtacaaagagctgaagcaacttctgaactctacttacccaaacttcacccttccaaagtgtggccaactgaagctgctcatgaactccacacgttacaacttcaccttgttgtctgctgaaaagacccagctgagcctgttgttgaagaacacagtgcaagaaaagacacagctgcagttggaaaacaaagagttgaagcaacttctgaacttcacctttccagaaagtgagcatggtcaactgaagctcctcataaatgcaacgaactacaacttcaccttgtctgcaaataaaaaacagctgaacctgctcttgaagaacgcattggaagaaaagacacagttgcaagaggagaacaaagagctgaagcaacttctgaactccacttacccaaacttcacccttccaaagtgtggccaactgaagctcctcatgaatgcaacacgttacaacttcaccttgttgtctgcagagaaaaccaagctgagtctggtcttgaaggagacaatgcaagaaaaaacacacttgcaagaggagaacaacgagctgaaacaacttctgaacctcaccattccagaaaatgagtatggccaactgaagcagctcataaatgcaacaaagtgcaacttcaccttgctctcagcagaaaagacccagctgaaccttctcttgaagaatacagtgcaagaaaagagacagctgcaggtggaaaacaaagagctgaagcaacttctgatcttcacccttccagaaaatgtgcatggagaattgaagctgctcatgaacacaacaaggtgcaaccttaccttggtgtctgcaaaagaaaaccagctgaaccttctcttgaagaatgcattggaagaaaagacgcagttgcaagaggagaacaaagagctgaagcaacttctgaactctacttacccaaacttcacccttccaaagtgtggccaactgaagctgctcatgaactccacacgttacaacttcaccttgttgtctgctgaaaagacccagctgagcctgctgttgaagaacacagtgcaagaaaagacacagttgcagttggaaaacaaagagttgaagcaacttctgaacttcacccttccagaaagtgagcatggtcaactgaagctcctcataaatgcaacaaactacaacttcaccttgtctgcagaaaaaaaacagctgaacctgctcttgaagaacgcattggaagaaaagacacagttgcgagaggagaacaaagagctgaagcaacttctgaactccacttacccaaacttcacccttccaaagtgtggccaactgaagctcctcatgaatgcaacaaggtacaacttcaccttgttgtctgcggagaaaaccaagctgagtctggtcttgaaggagacaatgcaagaaaaaacacacttgcaagaggagaacaacgagctgaaacaacttctgaacctcaccattccagaaaatgagtatggcccactgaagcaactcataaatgcaacaaagtgcaacttcaccttgctctcagcagaaaagacccagctgaaccttctcttgaagaacacagtgcaagaaaagagaaggctgcaggtggaaaacaaagagctgaagcaacttctgatcttcacccttccagaaaatgtgcatggacaattgaagctgctcatgaacacaacaaggtgcaaccttaccttggtgtctgcaaaagaaagccagctgaaccttctcttgaagaatgcattggaagaaaagacacagttgcaagaggagaacaaagagctgaagcaacttgtgaactccacttacccaaacttcacccttccaaagtgtggccaactgaagctcctcatgaatgcagcaaggtacaacttcaccttgttgtctgcagagaaaaccaagctgagcctgttcttgaaggagacaatgcaagaaaaaacaaagttgcaggtggagtacaaagagctgaagcaacttctgaactctaattacccaaacttcacccttccaaagtgtggccaactgaagctcctcatgaacgcaacacgttacaacttcaccttgttgtctgctgaaaagacccagctgagcctgctgttgaagaacatggtgcaagaaaagacacagttgcaagaggagaacaaagagctgaagcatcttctgaactatacttacccaaatgtcaactttccagaaagtgagcatggccaactgaagctcctcatgaatgcaacaaactacaacttcaccttgctgtctgcagaaaaaacccagctgaacctgctcttgaagaacacattggaagaaaagacacagttgcaagaggagaacaaagagctgaagcaacttctgaactccacttacccaaacatcacccttccaaagtgtggccaactgaagctgctcatgaatgcaacaaggtacaacttcaccttgttgtctgcagagaaaaccaagctgagtctggtcttgaaggagacaatgcaagaaaaaacacagttgctggaggagtgcaaagagctgaagcaacttctgaagtccacttacccaaacttcacccttcaaaagtgtggccaactgaagctgctcatgaacgcaacacgttacaacttcaccttgttgtctgctgaaaagacccagctgagcctgctgttgaagaacactatgcatgaaaagagacagctgcaggtggaaaacaaagagctgaagcaacttctgaacttcacccttccagaaaatgtgcatggacaattgaagctgctcatgaacacaacaaggtgcaaccttaccttggtgtctgcaaaagaaaaccagatgaatctactcttgaagaatgcattggaagaaaagacacagttgcaagaggagaacaaagagctgaagcaacatctgagcaccactaacccaaatgtcaactttccggaaagtgagcttggccaactgaagctcctcacgaatgcaacaaggtacaacttcaccttgttgtctgcggagaaaaccgagctgagcctgctcttgaaggagacaatgcaagaaaagacacagctgcagttggaaaacaaagagctgaagcaacttctgaacttcacccttccagaaagtgagcatggccaactgaaaatgtgcatgaacacaactcagtacaacttcaccttgctgtctgcagaaaaaacccagttgaacctgctcttgaagaacacattggaagaaaagacacagttgcaagaggagaacaaagagctgaagcaacatctaaacaccactaacccaaacttcacccttccaaagtgtggccaactgaagctcctcatgaatgcaacaaggtacaacttcaccttgttgtctgcggagaaaaccaagctgagtctggtcttgaaggagacaatgcaagaaaaaacacacttgcaagaggagaacaacgagctgaaacaacttctgaacctcaccattccagaaaatgagtatggcccactgaagcaactcataaatgcaacaaagtgcaacttcaccttgctctcagcagaaaagacccagctgaaccttctcttgaagaacacagtgcaagaaaagagaaggctgcaggtggaaaacaaagagctgaagcaacttctgatcttcacccttccagaaaatgtgcatggacaattgaagctgctcatgaacacaacaaggtgcaaccttaccttggtgtctgcaaaagaaagccagctgaaccttctcttgaagaatgcattggaagaaaagacacagttgcaagaggagaacaaagagctgaagcaacttgtgaactccacttacccaaacttcacccttccaaagtgtggccaactgaagctcctcatgaatgcagcaaggtacaacttcaccttgttgtctgcagagaaaaccaagctgagcctgttcttgaaggagacaatgcaagaaaaaacaaagttgcaggtggagtacaaagagctgaagcaacttctgaactctaattacccaaacttcacccttccaaagtgtggccaactgaagctcctcatgaacgcaacacgttacaacttcaccttgttgtctgctgaaaagacccagctgagcctgctgttgaagaacatggtgcaagaaaagacacagttgcaagaggagaacaaagagctgaagcatcttctgaactatacttacccaaatgtcaactttccagaaagtgagcatggccaactgaagctcctcatgaatgcaacaaact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@meso_cacase at
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This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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