LOCUS       XM_059279163            1879 bp    mRNA    linear   ROD 31-AUG-2023
DEFINITION  PREDICTED: Peromyscus eremicus NRDE-2, necessary for RNA
            interference, domain containing (Nrde2), mRNA.
ACCESSION   XM_059279163
VERSION     XM_059279163.1
DBLINK      BioProject: PRJNA1009129
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Peromyscus eremicus (cactus mouse)
  ORGANISM  Peromyscus eremicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Cricetidae; Neotominae; Peromyscus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_081430) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_949786415.1-RS_2023_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/26/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 3% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1879
                     /organism="Peromyscus eremicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:42410"
                     /chromosome="14"
     gene            1..1879
                     /gene="Nrde2"
                     /note="NRDE-2, necessary for RNA interference, domain
                     containing; Derived by automated computational analysis
                     using gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 4 Proteins"
                     /db_xref="GeneID:131923925"
     CDS             1..1713
                     /gene="Nrde2"
                     /codon_start=1
                     /product="nuclear exosome regulator NRDE2"
                     /protein_id="XP_059135146.1"
                     /db_xref="GeneID:131923925"
                     /translation="

MQASVLAASEVVVKDGVRTQRVLFDDIGQSLIRLSSPGLQFQLIEAFLQFLGVPSGFLPPASCLYLAMDESSVFDSELYDEKPLTYFNPSFSGISCVGYMEQLGCPRWTKGHSREGEEFVRNVFHLVLPLFSGQRKSQLCLSWVRYEVAKVIWCLHTKKKRLKSQGKNCKKLAKNLLKEPENRNNFCLWKQYAHLEWLLGNIEDARKVFDTALSMAGGSELKDRELCELSLLYAELEMELSPDSRGATTGRAVHVLTRLTESSPYGPYTGQVMATQVLKARKAYEHALQDCLGQTCASDPAPAESLDCLGSLVKCFMLFQYLTVGIDAAVQIYGQVFAKLKGSVLPEGPGPEDSASSQRLSSVLEAVTLMHTSLLRFHMNISVYPLAPLRETLSEALKLYPGNQVLWRAYVQIQNKSHSANKTRRFFNIVTRSAKHLEPWLFAIEAEKMRKRLVDSVQRVGGREVHATIPETGLTHRIRALFENAIRSDKGSQCPLLWRMYLNFLVPLGNKERSKGVFYKALQSCPWAKVLYMDAMEYFPDELQEIVDLMTEKELRVRLPLEELDLLLED"

     polyA_site      1879
                     /gene="Nrde2"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      

atgcaggcctcagtgctggcagcatctgaggtggtagtgaaggatggagttaggacccagagagtgctgtttgatgatattggacaatctctgatcagactttccagcccgggtcttcagttccagctcattgaggcctttctgcagttcttgggcgtgccttccggcttcctgcctccagcctcctgcctctacctggccatggacgagagcagcgtctttgacagtgaactttatgatgagaagcccttgacttacttcaacccttcgttttcgggcattagctgtgttggctacatggagcagttgggctgtcctcgctggaccaaaggccacagccgagagggcgaggagtttgtccgcaacgtcttccaccttgtgctgcctctgttctcaggccagcgcaagtctcagctctgcctctcctgggtgcggtatgaggttgccaaggtcatttggtgtctccacactaaaaagaagcgattaaagtctcagggaaaaaactgcaaaaaactagccaagaatctccttaaagagccagaaaaccgcaacaacttttgcctctggaagcagtatgcacacctggagtggttgcttggcaacatagaggatgccagaaaggtgtttgatacagcactcagcatggcaggcggcagtgagctgaaggaccgtgaactctgtgaactcagtctgctttatgccgagctggagatggaactgtcgcctgactcgagaggagccaccacaggccgggctgtccatgtgttaacgcgactgaccgagagcagtccctatgggccctacactgggcaggtcatggccactcaggttctgaaagctcgaaaggcttatgaacacgctctgcaggactgtctgggacagacttgtgcctctgacccagctcccgcagagtccttggactgcctgggtagcttggtcaaatgctttatgcttttccagtatttgactgtagggatcgatgctgctgtgcagatatatggacaggtgtttgccaagctgaagggctctgttctcccagaaggtcctgggccggaggacagtgccagctctcagaggttgagcagtgttctcgaagctgttaccctgatgcatacaagtctgctgcgattccacatgaacattagtgtgtaccctctggctccactccgagagacgctctcagaggctctcaagctatatccaggcaatcaggttctctggagggcatatgtacagattcagaataagtcccacagtgctaacaagaccaggaggttcttcaacatcgtcaccaggtctgccaaacacttggagccttggctgtttgcaattgaagccgagaagatgaggaagaggctggtggactctgtccagagagtaggtggtagagaggtccacgccaccatcccggagaccggcctgacgcatcggatcagggccctgtttgaaaatgcaattcggagcgacaagggcagccagtgccccctactgtggaggatgtatttgaattttttggttcccttagggaacaaggagagaagcaaaggtgtgttctacaaggcactccagagctgtccttgggcaaaggtgctgtacatggatgccatggagtacttcccagacgagctgcaggagatcgtggacttgatgactgagaaggagcttcgtgtacgcctgcccctggaggagctggacctactgctggaggactagcgtacacccgggggcagtgctggtctgctgaacagcgaggacagagggcccaggagagccacggctgtgcaagggctttcttaactgtctgggtggggtttggactgttttacatattatatatgtgaccaactatatgtacagatggagtcgtgccagtgataaa

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