LOCUS       XM_059047015            2813 bp    mRNA    linear   MAM 22-AUG-2023
DEFINITION  PREDICTED: Kogia breviceps protein argonaute-3 (LOC131746051),
            transcript variant X3, mRNA.
ACCESSION   XM_059047015
VERSION     XM_059047015.1
DBLINK      BioProject: PRJNA1006431
KEYWORDS    RefSeq.
SOURCE      Kogia breviceps (pygmy sperm whale)
  ORGANISM  Kogia breviceps
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha;
            Cetacea; Odontoceti; Physeteridae; Kogia.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_081310) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_026419965.1-RS_2023_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/18/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2813
                     /organism="Kogia breviceps"
                     /mol_type="mRNA"
                     /isolate="mKogBre1"
                     /db_xref="taxon:27615"
                     /chromosome="1"
                     /sex="female"
                     /tissue_type="fibroblast cells from skin"
                     /dev_stage="juvenile"
                     /geo_loc_name="USA: La Jolla, CA"
                     /lat_lon="32.866232 N 117.25444 W"
                     /collection_date="2017-08-24"
     gene            1..2813
                     /gene="LOC131746051"
                     /note="protein argonaute-3; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 10
                     Proteins"
                     /db_xref="GeneID:131746051"
     CDS             120..2000
                     /gene="LOC131746051"
                     /codon_start=1
                     /product="protein argonaute-3 isoform X3"
                     /protein_id="XP_058902998.1"
                     /db_xref="GeneID:131746051"
                     /translation="

MCEVLDIHNIDEQPRPLTDSHRVKFTKEIKGLKVEVTHCGTMRRKYRVCNVTRRPASHQTFPLQLENGQTVERTVAQYFREKYTLQLKYPHLPCLQVGQEQKHTYLPLEVCNIVAGQRCIKKLTDNQTSTMIKATARSAPDRQEEISRLVRSANYETDPFVQEFQFKVRDEMAHVTGRVLPAPMLQYGGRNRTVATPSHGVWDMRGKQFHTGVEIKMWAIACFATQRQCREEILKGFTDQLRKISKDAGMPIQGQPCFCKYAQGADSVEPMFRHLKNTYSGLQLIIVILPGKTPVYAEVKRVGDTLLGMATQCVQVKNVIKTSPQTLSNLCLKINVKLGGINNILVPHQRPSVFQQPVIFLGADVTHPPAGDGKKPSIAAVVGSMDAHPSRYCATVRVQRPRQEIIQDLASMVRELLIQFYKSTRFKPTRIIFYRDGVSEGQFRQVLYYELLAIREACISLEKDYQPGITYIVVQKRHHTRLFCADRTERVGRSGNIPAGTTVDTDITHPYEFDFYLCSHAGIQGTSRPSHYHVLWDDNCFTADELQLLTYQLCHTYVRCTRSVSIPAPAYYAHLVAFRARYHLVDKEHDSAEGSHVSGQSNGRDPQALAKAVQIHQDTLRTMYFA"

     misc_feature    120..461
                     /gene="LOC131746051"
                     /note="PAZ domain, argonaute_like subfamily. Argonaute is
                     part of the RNA-induced silencing complex (RISC), and is
                     an endonuclease that plays a key role in the RNA
                     interference pathway. The PAZ domain has been named after
                     the proteins Piwi,Argonaut, and Zwille; Region:
                     PAZ_argonaute_like; cd02846"
                     /db_xref="CDD:239212"
     misc_feature    order(255..257,300..302,342..344,354..356,408..410,
                     429..431,435..437)
                     /gene="LOC131746051"
                     /note="nucleic acid-binding interface [nucleotide
                     binding]; other site"
                     /db_xref="CDD:239212"
     misc_feature    594..1871
                     /gene="LOC131746051"
                     /note="PIWI domain, Argonaute-like subfamily. Argonaute is
                     the central component of the RNA-induced silencing complex
                     (RISC) and related complexes. The PIWI domain is the
                     C-terminal portion of Argonaute and consists of two
                     subdomains, one of which provides the...; Region:
                     Piwi_ago-like; cd04657"
                     /db_xref="CDD:240015"
     misc_feature    order(1005..1007,1017..1019,1053..1064,1071..1073,
                     1095..1097,1104..1106,1116..1118,1128..1130)
                     /gene="LOC131746051"
                     /note="5' RNA guide strand anchoring site [active]"
                     /db_xref="CDD:240015"
     misc_feature    order(1209..1211,1215..1217,1425..1427,1839..1841)
                     /gene="LOC131746051"
                     /note="active site"
                     /db_xref="CDD:240015"
ORIGIN      

gtgtggagaatagatagaggagaaaaaaactaatctgagaagccagttaggaggctttttcaatcactagttcagtttctgccactgccttctacaaagcacaacctgtaattcagttcatgtgtgaagttcttgacattcataatattgatgagcagccaagacctctgactgattctcatcgggtaaaattcaccaaagagataaaaggtctgaaggttgaagtgactcattgtggaacaatgagacggaaataccgtgtttgtaatgtaacaagaaggcctgccagtcatcaaacctttcctttacagttagaaaatggccaaactgtggagagaacagtagcacagtatttcagagaaaagtatactcttcagctgaagtacccacaccttccctgtctgcaagtggggcaggagcagaaacatacctatctgccactagaagtctgtaatatcgtggcagggcaacgatgtatcaagaagctaacggacaatcaaacctccactatgatcaaagcaacagcaagatctgcaccagatagacaagaggaaattagcagattggtaagaagtgcaaattatgaaacagatccatttgttcaggagtttcaatttaaagttcgggatgaaatggcccatgtaaccggacgcgtacttccagcacctatgctccagtatggtggccggaatcggacagtagcaacaccaagccacggagtatgggacatgcgagggaaacagttccacacaggagttgaaatcaaaatgtgggctatagcttgttttgccacacagaggcagtgcagagaagaaatattgaagggtttcacggaccagctgcgtaagatttctaaagatgcagggatgcccatccagggccagccttgcttctgcaaatatgcgcagggggcagacagcgtggagcccatgttccggcatctcaagaacacctactcagggctgcagctcattatcgtcatcctgccagggaagacgccagtgtatgcggaggtgaaacgtgttggagatacacttttgggtatggctacacagtgtgttcaagtcaagaatgtaataaaaacatcccctcaaactctctcaaacctgtgcctaaagataaatgttaaacttggagggatcaataatattcttgtacctcatcaaagaccttctgtgttccagcaaccagtgatctttttgggagcagatgtcactcatccaccagctggtgatgggaagaagccttctattgctgctgttgtaggtagtatggatgcccacccaagcagatactgtgctacagtaagagttcagagaccccgacaggagatcatccaggaccttgcctccatggtccgagaacttctcattcagttttataagtcaacacggttcaaacctactcgtatcatcttttatcgggatggtgtttcagaggggcagtttaggcaggtattatattatgaactactagcaattcgagaagcctgtatcagtttggagaaagactatcaacctggaataacttacattgtagttcagaagagacatcacactcgattattttgtgctgataggactgaaagggtcggaagaagtggcaatatcccagctggaacaacagttgatacagacattacgcacccatatgagtttgatttttatctctgtagccatgctggaatacagggtaccagccgtccttcacactatcatgttttatgggatgataactgctttactgcagatgaacttcaactgctaacttaccagctctgccatacttatgtgcgctgcacacgatctgtttctatacctgcaccagcgtattatgctcacctggtagcatttagagccagatatcatcttgtggacaaagaacatgacagtgctgaaggaagtcacgtttcaggacagagcaatggacgagatccacaagctcttgccaaggctgtacagattcaccaagataccttacgcacaatgtactttgcttaaaaagtctaagaatattctctgagaggaagaactggaagatgaatcaacatacaacttatgtttccagtggagtcagctgagtggggatgcctccagccatacagaaaccaacactgtgggggggccagagtctgatctttatgttaatacggaagattgtttacttcatcaaggaacacagcaccattatgcaatatgaaaccagccaactgcttttttgtgcggtctcctgtaggaagtatcgcaatcattttgttttcactttcttgtagtctaacccttttaatgcctttacctcaagttgcttggcagcacaactctttgcaaaaaaaaaaagtaaagaaaaagtaaatgatggttttttaaaaaacacacctatatgaataatcaaagttattgttcacagttatgtgtgcaaaaaatgtgcattcatgtattcttgtaaaagttatctgtatattttacttatatacctgcatactgcatatgcatatatatctggatctacactgataatagatatatatgtatctctgtatatattttatagttcattccattggggaactttctttcccttttattatcctcccaccaccactatgatttctctctctacctcccttgccttcatcacctacatttgtttttccctgatgctaccagtaacattcagatgttcatgtatctggttcatttgaatatgaagcatggcaaactagatttttattttgcacgccctactcctgtcttgtctcatacataattctgagtcctcatctcttggtattgctttcttaagaaactatatat

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