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2024-05-03 13:22:54, GGRNA.v2 : RefSeq release 222 (Jan, 2024)

LOCUS       XM_058483271            3699 bp    mRNA    linear   PLN 27-JUL-2023
DEFINITION  Lichtheimia ornata uncharacterized protein (O0I10_003199), partial
            mRNA.
ACCESSION   XM_058483271
VERSION     XM_058483271.1
DBLINK      BioProject: PRJNA999184
            BioSample: SAMN32099705
KEYWORDS    RefSeq.
SOURCE      Lichtheimia ornata
  ORGANISM  Lichtheimia ornata
            Eukaryota; Fungi; Fungi incertae sedis; Mucoromycota;
            Mucoromycotina; Mucoromycetes; Mucorales; Lichtheimiaceae;
            Lichtheimia.
REFERENCE   1  (bases 1 to 3699)
  AUTHORS   Mohabir,J.T., Shea,T.P., Kurbessoian,T., Berby,B., Fontaine,J.,
            Livny,J., Gnirke,A., Stajich,J.E. and Cuomo,C.A.
  TITLE     Genome sequence of Lichtheimia ornata CBS 291.66
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 3699)
  CONSRTM   NCBI Genome Project
  TITLE     Direct Submission
  JOURNAL   Submitted (27-JUL-2023) National Center for Biotechnology
            Information, NIH, Bethesda, MD 20894, USA
REFERENCE   3  (bases 1 to 3699)
  AUTHORS   Mohabir,J.T., Shea,T.P., Kurbessoian,T., Berby,B., Fontaine,J.,
            Livny,J., Gnirke,A., Stajich,J.E. and Cuomo,C.A.
  TITLE     Direct Submission
  JOURNAL   Submitted (31-MAR-2023) Infectious Disease and Microbiome Program,
            Broad Institute, 415 Main Street, Cambridge, MA 02142, USA
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. This record is derived from an annotated genomic
            sequence (NW_026695330).
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..3699
                     /organism="Lichtheimia ornata"
                     /mol_type="mRNA"
                     /isolate="CBS 291.66"
                     /isolation_source="bird dung"
                     /culture_collection="CBS:291.66"
                     /type_material="culture from type material of Absidia
                     ornata"
                     /db_xref="taxon:688661"
                     /chromosome="Unknown"
                     /country="India"
                     /collection_date="1961"
     gene            <1..>3699
                     /locus_tag="O0I10_003199"
                     /db_xref="GeneID:83210612"
     CDS             1..3699
                     /locus_tag="O0I10_003199"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_058345890.1"
                     /db_xref="GeneID:83210612"
                     /translation="
MTTHDNTTIVLPVKGMTCNSCVRSITNALDLDEGVHKAQVSLENESATIHYDPTIRTRQQLVELIEDCGFEVPDTIVTTTLPVKGMTCQSCVKSITSVLVDLAGVQSVDVSLEEEQATIMHDTSLLSRETIIEAIEDCGFDVPTTTQSSNSNTTTVLPVKGMTCQSCVKSITGALSGLAGAEYVDVSLDAEQATVIHDASLLSRETIIEAIEDCGFDVPLLNTNNNSNSSSSKKNEPGVAEIQVATSSSGADDDKYDSIQTAQLEIHGMTCASCVNSIERAVNSQAGIISIKVSLLAEKATVEYDPSVITDEQKIADMIEDVGFEAKVVQPKSDDTVQLQVFGMTCASCVHSIERGVSKVPGVHSITVNLMTEMAVVRYDHTRLGMRTIVETIEDLGFNALVHDNTRNAQLDSLSKVREIQEWRQACIRSVLFAVPVFFIAMVMPMFPWGNSILDIPLFFDGLYLMDVVQLALTIPVQFGVGKRFLVSAYKSLRHGSPTMDVLVSISTLAAFTFSVISMFRSLCAHSTHRPTVFFDTSTMLIAFISGGRLLENMAKGQSSSALSKLMSLTPSTALMLEVDEHTGNIISEKRIPSELIQQGDLLKIVSGDKIPADGTVTSGASTVDESMVTGEVDAVSKKEGDTVIGGTVNGPGMFVMKATRVGSDTALSQIVKLVEDAQVSKAPIQGFTDVVAGYFVPAVLLLGLGTLVIWSLLVTFLGIDRMPPMLQSEIENDGDGSWFFVCLKMCISVIIVACPCALGLATPTAVMVGTGVGAENGVLFKGGAVLENGQRVNTIVFDKTGTLTIGKLQVTRAESWSDTQLSSDQLLLLAAIAESQSEHPVGRAVVQKGKDLTGLDLLDNLAAISGFKSETGFGIECDIAITEDDDDHSAILRSLAMKGGASHRIVIGNQRFLEEFHSMKLSSEQARAIEAEEAQGHTCITVGWDGVAAGYIALADVLKPESRQVVATLHMMGLHTAMVTGDNVLTAQSIAKQVGITEVHAGVSPNGKTQLVQQMQRREMVSSNVFGSKRSRAVVAMVGDGVNDSPALAAADLGIALCSGTDVAIEAADVVLMRSDLSDVVAALVLSRAIFRRIKINLLWACIYNVIGIPLAMGVFMPLGWHLHPMLAGLAMAASSTSVVVSSLLLKWFWRKPTLVSEDQVDFAAPSTTIAIEEPLTPIDNATPIKASTTSIWSRIWNQLIGNGRFGGYQAVATDTNQDFDLQTLPLHQRL"
ORIGIN      
atgacaacacatgacaacaccaccattgtgcttccagtcaagggcatgacgtgtaattcttgcgtacgttcaatcaccaatgcacttgatctcgacgaaggagtccacaaggcacaagtcagcttggagaacgaatcagctaccatacactatgacccaacaatacgtacacggcaacagcttgtggaacttatcgaggattgtggatttgaagtgcctgatacgatcgttacaacaacacttcctgtcaaggggatgacttgccaatcatgtgtaaagtcgattacaagcgtattggtggaccttgcaggcgttcaatcagtggatgtcagcttggaggaggagcaagcgactattatgcatgatacatcattattatctcgcgagacgatcattgaggccattgaagattgtggattcgacgtgccaacaacgactcagagcagcaacagcaatacgacaacagtacttcctgtcaaggggatgacttgccaatcatgcgtcaaatccatcactggtgcattgagtggtcttgctggtgccgaatatgtggatgttagcttggatgctgagcaagcaacagtgatacatgatgcgtcattgctatctcgtgaaacgattattgaggctattgaagattgtggattcgatgttccattactcaacaccaacaacaacagcaacagcagcagcagcaaaaagaatgagcctggcgtggctgagattcaggtggctacgagtagcagtggggctgatgatgacaaatacgacagcatccaaaccgctcaattggaaatccatggcatgacatgtgcttcttgtgtcaatagcattgagcgtgcagtcaatagtcaagccggcatcatctccatcaaagtatcattgcttgctgaaaaggcgactgttgaatacgatccttcagtgattacagatgaacagaaaattgccgacatgattgaagacgttggattcgaagccaaggtggttcagccaaagagtgatgatacagtgcagctacaagtatttggaatgacatgtgcaagctgtgtgcatagcattgagcgtggtgttagcaaggtgcctggtgtacattcaatcacggtcaacttgatgactgagatggctgtggttcgatatgatcatactcgtcttggtatgcgtacaattgttgagacgattgaggatcttggtttcaatgcattggtccacgacaatacccggaatgcacagcttgatagcttgtccaaggtgcgtgagatccaagaatggcgacaagcttgtattcgcagcgttctttttgcagtgccggtctttttcattgccatggtgatgcctatgtttccatggggaaattcgatcttggatattcctttattctttgatggactttatttgatggatgtcgttcaactagcactcaccatcccagtccaatttggtgtcggcaaacgattcttggtatcggcatacaagtccttacgtcatggatcacccaccatggatgtccttgtttcgatttcaacacttgctgcattcactttttcagtcatttcgatgtttcgatctttatgtgcacattcaacgcatcgacccaccgtgttctttgatacatccaccatgttgattgcattcatttcaggaggtcgtttattggaaaacatggccaaaggacaatcttcttcagccttatcgaagttgatgtctcttacaccttcgacagcattgatgcttgaggttgatgagcacactggcaacattatttcggagaagcgtattccttcggagcttattcaacaaggcgatttactcaagattgtgtctggtgataagattccagctgatggtactgttacatcgggcgcttcgacagtggatgagagcatggttacgggtgaagtggatgctgtatccaagaaggaaggtgacactgtcattggtggtacagtgaatggccccggcatgtttgttatgaaagctacccgtgtcggctctgatacagcactcagccaaattgtcaagctcgttgaggatgctcaagtaagcaaggcgcccatccaaggcttcaccgatgtggtggcaggctattttgtaccagctgtgttgctccttggtcttggtactttggtgatatggtccttgttggtgacgtttttgggtattgatcgtatgccgcccatgctgcaaagcgagatcgagaatgatggtgatggcagctggttcttcgtatgcctcaagatgtgtatcagcgtgatcattgtggcatgtccctgtgctcttggcttggcaactccaacagcggtgatggtaggcacaggcgttggcgcggagaatggtgttttattcaagggtggcgctgtgctcgagaatggtcaacgtgtcaacacgattgtctttgacaagactggtactttgactattggcaagctgcaagtgactcgtgccgagagctggagtgatacacaattgtcgtcagatcaattattgctacttgccgccattgccgaatcacaaagcgagcatccagtgggtcgtgctgttgtacaaaagggcaaggatcttacgggtcttgatttgttggataatcttgcagctatctcaggcttcaaaagcgagactggatttggtatcgaatgcgacattgctatcaccgaagatgacgatgatcattcagcaatcttacgcagcttggctatgaaaggaggagcttcacatcgcattgttattggcaatcaacgatttctcgaagagtttcacagcatgaaattgagttcagagcaagctcgtgcgatcgaggctgaggaggcgcaaggtcacacatgcattactgttggatgggatggtgtggctgcaggctatattgctttggcggatgttctcaagccggagtcacgacaagtggtggcaacattgcacatgatgggattgcacacggctatggtgacaggtgataacgtgttgacagcacaatcgattgcaaagcaagtgggcatcactgaagtacatgctggcgtttcacccaatggcaagacacagctggtgcagcaaatgcaacgtcgtgaaatggtgagctcgaatgttttcggatccaagcgttccagggctgtagtggcgatggttggtgatggtgtcaatgattctcccgcattggcagctgctgatttgggtattgcactatgcagtggcactgatgtggcgattgaggcagctgatgtggtgctcatgcgcagtgatttatcggacgtggtggctgctctggtcttgtctcgtgccatctttcgacgaatcaaaatcaatttgttgtgggcctgcatttacaatgtgattggtattccgcttgcaatgggcgttttcatgccgctcggttggcacttgcatccaatgcttgctggcttggccatggcagcaagttctacaagcgtcgttgtcagcagccttttactcaaatggttttggcgtaaacctactcttgtttcagaagatcaagttgactttgctgctccctcaactactattgccattgaagagcctctcacccctatcgacaatgctacccccatcaaggcatccaccaccagcatttggtcacgcatttggaatcagcttattggaaatggacgatttggtggatatcaagctgtggccactgatacaaatcaagactttgatcttcaaactttaccattgcatcaacgactgtaa
//

by @meso_cacase at DBCLS
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If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596. [Full Text]