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2024-05-20 10:50:41, GGRNA.v2 : RefSeq release 222 (Jan, 2024)

LOCUS       XM_058422498            2793 bp    mRNA    linear   VRT 25-JUL-2023
DEFINITION  PREDICTED: Hirundo rustica keratinocyte proline-rich protein-like
            (LOC131378652), mRNA.
ACCESSION   XM_058422498
VERSION     XM_058422498.1
DBLINK      BioProject: PRJNA713843
KEYWORDS    RefSeq.
SOURCE      Hirundo rustica (Barn swallow)
  ORGANISM  Hirundo rustica
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Passeriformes; Sylvioidea;
            Hirundinidae; Hirundo.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053463.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_015227805.2-RS_2023_07
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 07/19/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2793
                     /organism="Hirundo rustica"
                     /mol_type="mRNA"
                     /isolate="bHirRus1"
                     /db_xref="taxon:43150"
                     /chromosome="14"
                     /sex="female"
                     /tissue_type="muscle"
                     /dev_stage="adult"
                     /country="Italy"
                     /collection_date="22-May-2018"
                     /collected_by="Giulio Formenti, Nicola Saino"
     gene            1..2793
                     /gene="LOC131378652"
                     /note="keratinocyte proline-rich protein-like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon."
                     /db_xref="GeneID:131378652"
     CDS             534..1598
                     /gene="LOC131378652"
                     /codon_start=1
                     /product="keratinocyte proline-rich protein-like"
                     /protein_id="XP_058278481.1"
                     /db_xref="GeneID:131378652"
                     /translation="
MSSGGSWVGARQCRDCPCPCPCPCPCPCPCPCVPVSLSLSLSLCPCPSPCPCPSPCPCPCVPVPVPVPSLSLSVSLSLSLSHPCVPIPVSLSLCPIPVPVPVPVPVPVPVSHPCPIPVPVSQSLSHPCVPVPVSLSLSLSLSLSHPCPIPVSLSQSLSLSLCPCPCVPVPVPVPVPVPVPVPVPSLSHPCPIPVPVPSLCPIPVPSLSHPCPCRARGIPGEVRTQNSSKPARAGTPAAPVLSSCPLPSSPLSWGSRGVAEAQQGGTELLHPCWLLPGARTLPGEEQLHVFSRKTIGNVCCPLAAAPAELWRSSGWVSWPRRIPRSCSGAGPEPLPCCATPRERDVEPRAVPSLP"
     polyA_site      2793
                     /gene="LOC131378652"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
gcagcagaggacgccctgaaggggttcccagagatgccgggggtatttcaggagtgatgtgcgggtacctgagcaagccaggagctgtcattcctgtgccgggaatgctccttccccctgtcccaccagtcctctttccccacagggtaaacagctggaagtgttgagctcactgccagaggctccagacagacactttgtgccacacgacatcccgggacaccttaatgactcctctttagcttaatgaacctctaacaaccggcgccgcctgctcttgctgctcttgctccactctgggacggccgcaggacacggaggaaggtacacggttttacacaatgggcaccaccaggagcaagagaagcttcccatccacaccgaccccgagtcccaggagtcctgtttctagtcctggcccagcagaggaagaacagaggccttgtaggatattccaaggattcaccgacagcaggacttgaaaattcatcgctctgcatcctcgtggtgcctcctgcagtggatccccaggaatgtccagcggtggcagctgggtgggagcacggcagtgtcgggactgtccctgtccctgtccctgtccctgtccctgtccctgtccctgtccctgtgtccctgtgtccctgtccctgtccttgtccctgtgtccctgtcccagtccctgtccctgtcccagtccctgtccctgtccctgtgtccctgtccctgtccctgtcccatccctgtccctgtccgtgtcgctgtccctgtccctgtcccatccctgtgtccctatccctgtgtccctgtccctgtgtcccatccctgtcccagtccctgtccctgtcccagtccctgtccctgtgtcccatccctgtcccatccctgtccctgtgtcccagtccctgtcccatccctgtgtccctgtccctgtgtccctgtccctgtccctgtccctgtccctgtcccatccctgtcccatccctgtgtccctgtcccagtccctgtccctatccctgtgtccttgtccctgtgtccctgtccctgtcccagtccctgtccctgtccctgtccctgtccctgtcccatccctgtcccatccctgtcccatccctgtccctgtcccatccctgtgtcccatccctgtcccatccctgtcccatccctgtccctgccgtgccagaggcattcctggtgaagtcaggacacagaacagctccaaaccagcccgtgcagggactcctgctgctcccgtcctttccagctgccctctgcccagctcacccctgtcctgggggtctcgaggggtggctgaagcccagcagggtgggactgagctgctccatccctgctggctcctgcctggagcccggacactgccaggggaggagcagctccacgttttctccaggaaaacgataggaaatgtttgctgccctttggctgcagcccctgccgagctctggagaagctctggttgggtttcctggcccaggaggattcccaggagctgcagtggggccggcccagagccactgccctgttgtgccactcccagggagcgggacgtggagcccagagctgttccgtccctcccctgagcaaactttgggcatttggaggccgcaggaagctcgggctggagccagagccggtctgtagtggatcaccaagtgccagccgggaaaacaaaccatctaaacccttttctagccacgtttggaagagagaacttctgcttacctccgccacctttatttttctattggttgccggtctcttccagctgaggcgagaactttccagagaagttttccagactttcccggctcagcactggcgcagctctcggtcctcagccgcctcccgcacgccgctgtcgcccctcctgagctgctccccctcgcatggagagggcgggcaaggctccaaactccaccagcctgggagaaggattttcctgcaggatggagaccacgagcctcgaccctttttaggggaagctccaccccagagatgccaccctgagcctagaaagtaaaactgtgctccgtcagacggcgcaaccgtgtacagatatttttaatgtacaaaggaaaagctgacattatttattattttttatcaggaacgtgtggggtttttttttcattaaaagcttctcgaccaaggagcttaacatcctatgtgttattatttagtaatatttctgttgctatgtgacaggtatttactgtaaacagacaaatcctgctcagaacaaacaaaaatgttgctcagtaggaagaatattgtgcatgaaaaagaagaagcggcttcctggccacggtgtctgactcctttaaatacagcaaagtcactgacaaagcttcacatccttgtcctttaggattcagaaggacactgggcagaaacagccccaaaaggaagaccaaggtggaaaattgctggaaaaacagaaattattgatgtttgtggtggaaggtgctcctggttcatcaccgggacctggctggcaatgatctgtctttagagggttttgtttccaaaagaattcattcagttttactcttgacaccagaacagtgagtgaaaaaaagccattattgaaagtttgggaaaaaatccatccagggctgcctcagtcctgtgatcccccctctgtggaagcgcccacgggggttttgttggggtttgggcacacaaaccttggcttggtttcacctcaagtgtcaaatttcttaaaagaaatcctaaaataaagcttttctctgtccccactgaagggcatcaaaa
//

by @meso_cacase at DBCLS
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If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596. [Full Text]