LOCUS       XM_056134340            3497 bp    mRNA    linear   MAM 09-OCT-2023
DEFINITION  PREDICTED: Sorex fumeus NRDE-2, necessary for RNA interference,
            domain containing (NRDE2), mRNA.
ACCESSION   XM_056134340
VERSION     XM_056134340.1
DBLINK      BioProject: PRJNA972655
KEYWORDS    RefSeq.
SOURCE      Sorex fumeus (smoky shrew)
  ORGANISM  Sorex fumeus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Eulipotyphla; Soricidae;
            Soricinae; Sorex.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_026606155) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_029834395.1-RS_2023_10
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 10/04/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3497
                     /organism="Sorex fumeus"
                     /mol_type="mRNA"
                     /db_xref="taxon:62283"
                     /chromosome="Unknown"
     gene            1..3497
                     /gene="NRDE2"
                     /note="NRDE-2, necessary for RNA interference, domain
                     containing; Derived by automated computational analysis
                     using gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 4 Proteins"
                     /db_xref="GeneID:130042002"
     CDS             54..3497
                     /gene="NRDE2"
                     /codon_start=1
                     /product="nuclear exosome regulator NRDE2"
                     /protein_id="XP_055990315.1"
                     /db_xref="GeneID:130042002"
                     /translation="

MALFPAFAAVGEAPDGGNSRRELDWLSNPSFCVGRAASPGQPAEDTTATASDRSPPTRSPVKSESSGDSDADRKRKQTSRKKKKEKKRKKQRQHHKRARSRRSASSSSSSDSEPPSDSGKPRQGASADPGRRLVWLEDAQALTSDTFRTDKRPDPANWEYKSLYRGDIARYKRKGDSCLGLNPKKQRVSWEGAPRQKKPAHAQGERYFARRSLGLLSAAGVAVRPRAPEPPAAAPAAFIPVADPEEAAPPVTSWLNPLGIYDPATTQWLQGQGAPSEQSPAVPDAPADPESTALRAKVEDFNRRLRESPRDVQLWMAFVDFQDEAMRRPGLYALEADGEPRQRASLRLVLEKKLAVLERALDSNQGSVELQLARLRVCAELWEPGALAKEWQKLLFLHPNDAALWQKYLLFCQGQFSTFTVSRLLGAYGKCLSTLSAVQDGSILSHPALPGTEDALFGLFLQQCHFLRQAGHTEKAVSLFQAMVDFTFFKPDSVKELPTRGQVEFFEPFWDSGEPRAGEKGARGWRAWMHQQERGGWVIVTPDEEEDEVDDDAPEVRDRTLPRWQLWLAAERSREQKHWRPWRPEKSKKQSEDDCEDPERQVLFDDIGQSLIRLTRPELRFQLVTAFLQFLGVPCGARPPATCLSLALDEGDLFDGSLSDEQPLTAPQPPFSGVGCVGCSDPLGGRRGTRGHGREGEDFIRNLLHLLLPLFAGPERAQLCLAWLRYEVAKVLWCLHTKNKKRLKSRGKNCKKLAKSLLKEPENRNNFCLWRLYAHLEWLLGNTEDARKVFEAALGAAGGRALQDGGVCELGLLYAQLELELELAGDSRGPAAARAVHILTRLTESEPGAPAPGPASAVPVLKARKAYERALEACLPEEAAIRGRLASVAGCFMLFQYLTVGIEAAVRVHDQVKAQLEAAAGATAGSGPEEAASPGRPGPVLEALALLHTNLLRFHMRVGVYPLAPLREALAGALRLYPDNQGLWRAFVQVQNKTHSASRTRRFFDAVTRSTKALEPWLFAIEAEQMRKRLVEMVQRVDGREVHATLPESGLVHRIRGLFESAVRTEAGAQCPLLWRMYLKFLVSLGNKERSKGVFYKALQNCPWAKALYMDAVEYFPDELQEILDLMTEKELRVRLPLEELELLLED"

     misc_feature    489..>719
                     /gene="NRDE2"
                     /note="MTR4-interacting domain (MID) found in nuclear
                     exosome regulator NRDE2 and similar proteins; Region:
                     NRDE2_MID; cd22200"
                     /db_xref="CDD:412062"
     misc_feature    954..1949
                     /gene="NRDE2"
                     /note="necessary for RNA interference; Region: NRDE-2;
                     pfam08424"
                     /db_xref="CDD:462472"
ORIGIN      

gccgctcgccgccgccatttccgccgtgggtcgcggcggcgcggcctgtcgccatggcgctcttcccggccttcgcggccgtcggcgaggctcccgacggcggaaactccaggagagagctggactggctgagcaaccccagcttctgtgtcggaagagccgcgtccccgggccagccagccgaggacaccacagccaccgcctccgaccgctcgccgccgacaagaagtcccgtgaagtccgagtcctcaggtgacagtgacgctgacagaaagcgcaaacagaccagcagaaagaagaagaaagagaagaagcggaagaagcagcgccagcaccacaagagagcccgcagcaggcgctcggccagcagcagcagcagcagcgactcggagccccccagcgactccgggaagcccaggcagggagcctcggccgaccccgggcggcgccttgtgtggctggaggacgcccaggccctgacctcggacaccttccgcacggataagaggccagaccccgccaactgggagtacaagtccctctaccgcggcgacatagccaggtacaagaggaaaggcgactcgtgcctgggcctgaaccccaagaagcagcgcgtgtcctgggagggggccccccgccagaagaagcccgctcacgcgcagggcgagaggtacttcgccaggaggagcttgggcctgctgagcgcggccggcgtggccgtgcgcccccgcgccccggagccccccgccgcggcccccgccgccttcatccccgtggcggaccccgaggaggcggccccacccgtgacctcctggttgaacccgctggggatctacgatccagccaccacgcagtggctgcagggacagggggccccgtcagagcagtccccggcggtgcccgacgccccagcagaccccgagagcacggcactcagggctaaggtggaggacttcaaccgcaggctacgggagagcccgcgcgatgtccagctctggatggccttcgtggatttccaggacgaggcgatgcggcggcctgggctgtacgcgctggaggcggacggggagccccggcagcgggcgtcgctgcggctggtgttggagaagaagctggccgtcctggagcgggcgctggacagcaaccagggcagcgtggagttgcagctggcgcgcctacgcgtgtgcgccgagctctgggagccgggcgccctggccaaggagtggcagaagctcctcttcctgcaccccaacgacgcggccctctggcagaagtacctgctcttctgccagggccagttcagcaccttcaccgtgtccaggctgctgggggcctacggcaagtgcctgagcacgctgtcggccgtgcaggacggcagcatcctgtcccaccctgcgctgcccggcaccgaggacgccctgtttgggctcttccttcagcagtgccacttcctgcgccaggctggccacaccgagaaggctgtgtccctgttccaggctatggtggacttcaccttcttcaagcccgacagcgtgaaggagctgcccacgcggggccaggtggagttcttcgagcccttctgggacagcggcgagccccgggccggggagaagggcgcccgtggctggcgggcgtggatgcaccagcaggaacgtggcggctgggtcatcgtcactccagatgaggaggaggacgaggtggacgacgatgccccggaggtccgagacaggaccctgccccgctggcagctctggctggcggccgagcgctcccgggagcagaagcactggcgcccgtggcggcctgagaagagcaagaagcagagcgaggacgactgtgaggaccccgagaggcaggtgctgttcgacgacatcgggcagtctctgatccgcctgaccaggcccgagctgcgcttccagctggtcactgccttcctgcagttcctgggcgtgccctgcggcgcccgcccgcccgccacctgcctgtccctggcgctggacgagggcgacctctttgacggcagcctctctgacgagcagccgctgacggcgccccagccgcccttctccggcgtgggctgtgtgggctgcagcgacccgctgggcggccggcgggggacccggggccacgggcgggagggcgaggacttcatccgcaacctgctccacctcctgctgccgctcttcgccggccccgagcgggctcagctctgcctcgcctggctgcgctacgaggtggccaaggtcctctggtgcctgcacacgaagaacaagaagaggttgaagtcccgagggaagaactgcaagaagctagccaagagtctcctcaaggagcccgagaaccgcaacaacttctgcctgtggcggctgtacgcgcacctggagtggctgctggggaacacggaggacgcgcgcaaggtgttcgaggcggcgctgggcgcggcgggcggccgggccctgcaggacggtggcgtctgcgagctgggcctgctctacgcgcagctggagctggagctggagctggcaggtgactcccgaggcccggccgcggcccgcgccgtgcacatcctcacccggctgaccgagagcgagcccggcgcgcccgcccccggcccggcctccgccgtccccgtcctgaaggcgcgcaaggcgtacgagcgcgcgctggaggcctgcctgccggaggaggccgccatccggggccgcctggccagcgtcgccggctgcttcatgctcttccagtatctgacggtgggcatcgaggcggccgtgcgggtccacgaccaggtgaaggcgcagctagaggccgccgctggggccaccgcgggcagcggcccagaggaagcggccagccccgggcgccccggccccgtcctcgaggcgctggcgctgctgcacacgaacctgcttcgcttccacatgcgggtgggcgtgtacccgctggcgcccctgcgcgaagccctggccggggccctgaggctctacccggacaaccagggcctctggcgcgccttcgtgcaggtgcagaacaagacccacagcgccagcaggacgcgaaggttcttcgacgccgtcaccaggtccaccaaagccctggagccctggctgtttgccatcgaggccgagcagatgaggaagaggctggtggagatggtgcagagggtggacggcagggaggtgcacgccaccctccctgagagcggcctggtgcaccgcatccggggcctgttcgagagcgccgtgcggacagaggccggcgcccagtgccccctgctctggcggatgtacctgaagttcctggtttccttggggaataaggagagaagcaaaggtgtgttctacaaagccctgcagaactgcccctgggccaaggcgctgtacatggacgcggtggagtacttccccgacgagctgcaggagatcctggacctgatgaccgagaaggagctgcgggtgcgcctgcccctggaggaactggagctcctactcgaggactag

//