LOCUS       XM_055920328            5679 bp    mRNA    linear   VRT 08-MAY-2023
DEFINITION  PREDICTED: Salvelinus fontinalis potassium sodium-activated channel
            subfamily T member 1b (kcnt1b), transcript variant X7, mRNA.
ACCESSION   XM_055920328
VERSION     XM_055920328.1
DBLINK      BioProject: PRJNA962531
KEYWORDS    RefSeq.
SOURCE      Salvelinus fontinalis (brook trout)
  ORGANISM  Salvelinus fontinalis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii;
            Salmoniformes; Salmonidae; Salmoninae; Salvelinus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_074668) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_029448725.1-RS_2023_04
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 04/27/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5679
                     /organism="Salvelinus fontinalis"
                     /mol_type="mRNA"
                     /isolate="EN_2023a"
                     /db_xref="taxon:8038"
                     /chromosome="4"
                     /sex="female"
                     /tissue_type="heart"
                     /dev_stage="smolt"
     gene            1..5679
                     /gene="kcnt1b"
                     /note="potassium sodium-activated channel subfamily T
                     member 1b; Derived by automated computational analysis
                     using gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 2 Proteins"
                     /db_xref="GeneID:129853866"
     CDS             559..4146
                     /gene="kcnt1b"
                     /codon_start=1
                     /product="potassium channel subfamily T member 1 isoform
                     X7"
                     /protein_id="XP_055776303.1"
                     /db_xref="GeneID:129853866"
                     /translation="

MMRPRTPTDPEVTMSPQRRSSSSNGDRSSSTETLQKNNSSNTGVILDISALKMAEVDSEVPPLRPRYRFRDLLLGDQSFQNDDRVQVEFYVNENTFKERLKLFFIKNQRSSLRIRLFNFSLKLLTCALYVIRVALDDPEQVTGVCVNCQNRTSTATAESTEITDINWELIFWVNRRVPVWAIQVTVALISFLEAMLLTYLSYKGNIWEQMFQISFILEMINTVPFIITIFWPPLRNIFIPVFLNCWLAKCALENMINDLHRAIQRTHSAMFNQVLILICTLLCLVFTGACGIQHLERAGKNLTLFNSLYFCIVTFSTVGYGDVTPHIWPSQLLVVILICVALVVLPLQFEELAYLWMERQKSGGNYSRHRAQTEKHAVLCVSSLKIDLLMDFLNEFYAHPRLQDYYVVILCPTEMDIQVRRILQIPLWSQRVIYLQGSALKDTDLMRAKMDDAEACFILSSRNEVDRTAADHQTILRAWAVKDFAPNCPLYVQILKPENKFHVKFADHVVCEEEFKYAMLALNCVCPATSTLVTLLVHTSRGQEGQLSPEQWQRTYGRCSGNEVYHIRLCDSKFFGEYDGKSFTYASFHAHKKYGVCLIGVKREDNKSILLNPGPRHIMSAPDTCYYINITKEENSAFIFKQEEKDKKGLPVTGLYDAPSRLPVHSIIASMVDQATFYGTVAMDLQNPADPPEDCSKLSLPTENGAGSRRPSIAPVLEIADSSSILPCDLLSDQSEDETNHSDEEGSSVSDFVKGYPPNSPYIGSSPTLCHLLPQKASFCCLRLDKGCRHNSFEDAKAYGFKNKLIIVSAETAGNGLYNFIVPLRAYYRPRKELNPIVLLLDYPPDNHFLEAICCFPMVYFMAGTIDNLDHLLQCGIIYADNLVVVDKESTMSAEEDYMADAKTIVNVQTMFRLFPSLSIITELTHPSNMRFMQFRAKDCYSLALSKLEKIERDKGSNLAFMFRLPFAAGRVFSISMLDTLLYQSFVKDYMIPIARLLLGLDTTPGSGYLCAMKVTEEDLWIRTYGRLFQKLCSSSAEIPIGIYRTESHMFSSTESQVSINVENTGGDDQRSNRRASWKEKTAQRNSTASDQSEHPLLRKKSLQWARRLSRKNTKPPSRTERISQQRLNLYRRSERQELSELVKNRMKHLGLPTVGYEDVANLTASDVMNRVNLGYLQELQGISEHPLREETRTG"

     misc_feature    <1465..1617
                     /gene="kcnt1b"
                     /note="Ion channel; Region: Ion_trans_2; pfam07885"
                     /db_xref="CDD:429715"
     misc_feature    2077..2361
                     /gene="kcnt1b"
                     /note="Calcium-activated BK potassium channel alpha
                     subunit; Region: BK_channel_a; pfam03493"
                     /db_xref="CDD:427334"
ORIGIN      

tgggcatggagcgtcggttgggtgctgtgaatgggcgtcttaccatcgttccacatgcaataccctgcccttacaacatgcacagtggacacaaagcatggattatgctatccaattaggaccactgaggctgatgctgtcactagcctgtatctgctttgaaatgcgtttgattgttttacaaagaaaacatgacattttctaacttaaaaaagaaacgtaagtagaaacatttcaacttcaagttgtctttcaacaagaacaacggccttgtaaaatataaagataaaaaggaaaatacagtcggagatgtagtgtcagaaatatttctcaacgaggaccagaaaatacttccacctggatgcgtggaccctctatcaggggcttcagcggcacggaccctttctagtgtaggctaatttaaatgtatccatgaagaagacggagctttcaatgcaacatttaaatcggaagacatccgccacctctgcgactcgaccggggctgcacggacaatgtgcagcggatgttttatcataaacaagacgtgtgtttacgatgatgagaccacggacaccgacagatccagaggtgactatgagcccgcaacgtcgatcctcgagttccaatggagacaggtcatcgtccactgagaccctgcagaagaacaacagcagcaacactggagttattctggacatctcagccctgaagatggcggaagtggattctgaggtcccccctctacggccccgctaccgcttcagggacctgctgctgggggaccagtcatttcagaatgacgacagggtgcaggtggagttctatgtgaatgaaaacaccttcaaggagaggctcaagctgttcttcatcaaaaaccaaaggtcaagcctgaggatccgtctgtttaacttctccttgaagctgttgacgtgtgccctttacgtcatcagagtggctctggacgaccctgaacaggtcactggagtatgtgtcaactgtcagaatagaacaagcacagccacagcagaatccacagaaatcacagacatcaactgggagttgattttctgggtgaacagaagggttcctgtttgggcgatacaggtgaccgtggccttaatcagtttcctggaggcgatgctcctcacatatctcagctacaaagggaacatctgggagcagatgttccagatctccttcatcctggagatgattaataccgtgccatttataattactatcttctggcctccattgagaaacatcttcatcccagtgtttctcaactgctggttagccaagtgtgccctggagaatatgattaacgatctccatcgtgccatccagaggacccactctgccatgttcaaccaggtcctcatacttatctgcacccttctctgtctggtcttcactggggcgtgtggtatccagcatctagagagggccggaaagaacctgactctgttcaactctctgtatttctgcatcgtcaccttctctacggtgggctatggtgacgtcacacctcatatctggccttctcagctgctggtggtcattctcatctgtgtggccctcgtggtgctcccgctacagtttgaggagttggcctatctgtggatggagcgtcagaagtcaggaggaaactatagcagacaccgggcccagacagagaaacatgcggtcctgtgcgtcagctctctgaagatagacttgctcatggacttcctcaacgagttctacgctcatcctagattacaggactactatgtggtgatcctgtgtcctacagagatggacatccaggtgcgtcgtatcctccagatccccctgtggtcccagagggtcatctatctccagggctcagcactcaaagacacagacctcatgagggccaagatggatgatgcagaagcctgttttatcctgagcagtaggaacgaggtggaccgcactgctgctgaccaccagaccatactgagagcctgggctgtcaaggactttgccccaaactgccccctgtatgtccagattctcaaaccagagaacaaattccatgtaaagtttgctgatcatgtggtctgtgaggaggaattcaagtatgccatgctggccctgaactgtgtatgtccagccacatccacactggtcacgctcctggtgcacacctccagaggacaggagggccagctgtcaccagagcagtggcagaggacgtatggacgttgctctgggaacgaggtctaccacatccgcctgtgcgacagcaagttcttcggggagtacgacgggaagagtttcacctacgcctccttccacgcacacaaaaagtatggtgtgtgtctgatcggggtgaagagggaagacaacaagagcatcctgctgaacccaggtcctcgccacatcatgtccgccccagacacctgctactacatcaacatcaccaaggaagagaactctgcgttcatcttcaaacaggaggagaaagacaagaagggcctgccggtgaccgggctgtatgatgccccctccaggctgcctgtgcacagcatcatcgccagcatggttgatcaggccactttttatgggacggtagccatggacctccagaacccagcggaccccccagaggattgcagcaaactgagcctgcctacagagaacggggctgggagtagacggcccagcattgcccccgtcctggagatagctgactcctcctccattttgccctgcgacctgctcagtgaccaatcagaagacgagaccaaccactcagacgaggagggctcgtcggtgtcagactttgtgaaaggatacccgccaaactccccgtacattggcagctctccaaccctgtgccatctcctacctcagaaagcctcattctgctgccttcggctggacaagggttgcagacacaacagttttgaggatgccaaggcctatggttttaagaacaagctgatcatagtatccgcggagacggcagggaacggcctctataacttcatcgtccctctacgcgcttactaccgccccaggaaagagctcaaccctattgtactgctactagactacccgcctgacaaccacttcctagaagccatctgctgtttcccaatggtctacttcatggccggaaccatagataacctggaccatctgctacagtgtggcatcatctatgctgataacctggtggtggtggacaaggagagcaccatgagtgctgaggaggactatatggcagatgccaagactatcgtcaacgtacagaccatgttcaggctgttccccagtctcagtatcatcaccgagctgacccacccctccaacatgaggtttatgcagttcagggctaaggattgctactccctggctctctccaagctagagaagatagagcgtgataagggttccaacctggccttcatgttccgcctgccgttcgctgcaggcagagtgttcagtatcagtatgctggatacgctgctctaccaatcatttgtaaaggactatatgattcccatagcaagacttttactaggcctggacaccacaccagggtctggttacctatgtgcaatgaaggtgacagaggaggacctgtggatcaggacgtatggcaggttattccaaaagctgtgttcttccagcgcagagattccaataggcatctaccgtacagagtcacacatgttctcctccacagagtctcaagtatccatcaacgtagagaacactggtggtgacgaccagagaagcaatcgtcgcgcgtcgtggaaggagaaaacagctcagcggaactccaccgccagcgaccaatcagaacatccgttgctgaggaagaagagcctccagtgggcgcggcgtctgagccgtaagaacaccaagccaccgagtcgcaccgagcggatctcccagcagcgcctcaacctgtaccggcgctccgagagacaggagctgtctgagctggtcaagaaccgcatgaagcacctaggcttgcccactgtcggatacgaggatgttgctaatcttactgcgagtgatgtcatgaaccgagtaaatctaggatatttacaagagttgcagggaatttcagagcatccgttaagagaagagaccagaacaggttagatggagaatcataatcatacagcactactgcatgactctgtgtgataatgatggcagtgttgggtggcagacaagcagtctttcattctctctgtcctctgcgttgtgtggactgaagtgggagacttaggcctagttcaaattgtacaactgatgtacacaacagttgtttcaaatgcattgtgcatcacttgtacaacctgtgtgaactaggacttattgactgatgatggaacgtgagggacggccagacagactaccaagttactgcagggcagcagagtgtggatacactacagtacggcgggatgggacagagtggagcagaaagcattatgactgtgttgttcggaaggtcaacggtacattactatcaacaaaccaaagttacactgagaatcttgtagaatataaaaaacatttagcattttattagcctaaatacaatatgatttcaaaatattcatcacattttagtccctctgaaagactatcctagattgacgctatattaggaccccttctaatcccacacacccaatgtattttgcttcactctctgattggttgagcctcactttgtttggttgagtctgccctgccggatgccggagcatgttctagttgtgttcgtgggtgtctcaacatttttatatgggggctgagtgtcattggcatggcaaccatggtgccctgtcgccgtgcgtgaccaggccgacgtgtggaatgcgcagaaggtgaatcgatgtggacagtgtctgcatgtctttcttaaactgcgcatggagggatgcgcttgccttgtggcagcatgggcctaccctgtaccagccatgccctgtcagtaacagttagaccttctctctctcctacccaccccgcctggcattataaggggcaaacacaggtgggttttggagaagcagatgcactttaccccccaacccccaagtttgagcctcattctgtcccaggtgcacagtttctcactcatacacgcgaaacaggtaaaacacaatcacttctcactcactctgaatagactttgccccctccctaggcccaggggcaacttgatcctactccaagacaagcacaggacatcaaagtatgccatgttaagggatattcagttacacaccattgattatactgtatttgaatagacattaagaaaatgaacacaggacttatatcatacaggacttataggcttactatatataaataagctttgttcagccagaacggcccttaaaacggctcttactgtatatgcatatgatttattatgtcagtcagccgtttactgaagatcagggaatcctatacttccattttctaaatggaccattagttgtctaatggtgtgtgtaattggtgactatgaggggactggtacagccagagcagctgctaagagctgtccctgcatctgttctgttccagatgagatgaacgaccaccagaacactctgtcctacgttctcatcaacccccctccagataccatgctggagctcaatgacattg

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