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2024-05-03 23:41:16, GGRNA.v2 : RefSeq release 222 (Jan, 2024)

LOCUS       XM_055426172            7039 bp    mRNA    linear   MAM 20-APR-2023
DEFINITION  PREDICTED: Moschus berezovskii ATPase copper transporting beta
            (ATP7B), transcript variant X4, mRNA.
ACCESSION   XM_055426172
VERSION     XM_055426172.1
DBLINK      BioProject: PRJNA955228
KEYWORDS    RefSeq.
SOURCE      Moschus berezovskii (Chinese forest musk deer)
  ORGANISM  Moschus berezovskii
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia;
            Pecora; Moschidae; Moschus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_026573367) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_022376915.1-RS_2023_04
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 04/13/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7039
                     /organism="Moschus berezovskii"
                     /mol_type="mRNA"
                     /isolate="MB002"
                     /db_xref="taxon:68408"
                     /chromosome="Unknown"
                     /tissue_type="blood"
                     /dev_stage="adult"
                     /ecotype="Sichuan"
     gene            1..7039
                     /gene="ATP7B"
                     /note="ATPase copper transporting beta; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 3 Proteins"
                     /db_xref="GeneID:129556298"
     CDS             675..5138
                     /gene="ATP7B"
                     /codon_start=1
                     /product="copper-transporting ATPase 2 isoform X4"
                     /protein_id="XP_055282147.1"
                     /db_xref="GeneID:129556298"
                     /translation="
MEKAGDQTPGNPEPSSLATLGDPQVTLLSVHKRWSFKRSPGTGGSSRPVISEENCPPLSEEGEFSQKVLNGSEEISSKQILSELSQPAMKQSFAFDNSGYEDDLDGVRPSQTATGTISIVGMTCQSCVKSIEGRVSSLNGIVSIKVSLEQGSAEVRYMPSVVSLMQICHQIEDMGFQASVAEGKATSWPSRVSPTSEAMVKLRVEGMTCQSCVSSIEGKIGKLQGVMRVRVSLSNQEAVITYQPYLIQPQDLRDHITDMGFEAVIKNKVAPVSLGPIDVRRLQSTLSAAPPAPVNQNDNNSETRGGQGVPLHLRVDGMHCKSCVLNIEDNIGRLPGVQSIHVSLESRTARVQYDPSLISLGALWRAIEALPPGNFKVSLPNGAEGGGPDSRSPPVPNPPCTVMLAIAGMTCKSCVQSIEGLISQRAGVHQISVFLAEGTAVVLYDPSRTHPEELRAAVEDMGFEASILAENCSSNHIGNHSAGSAMGHAAAGAPMPMQRGAPQPGGLHTNHIPRQSPKSLLASTTVAAKKCFLQISGMTCASCVSNIERNLQKEPGILSVLVALMAGKAEVKYNPEVIQPLEIAKLVQDLGFEAAVMEDYTGSDGDLELMITGMTCASCVHNIESKLRRTDGITYASVALATSKAHVKFDPEIIGPRDIVKLIEEIGFHASLAQRIPSAHHLDHKVEIKQWKNSFLCSLVFGIPVMGLMIYMLIPSREPQATVLDHSVIPGLSIVNLIFFILCTFVQFLGGWYFYVQAYKSLRHGVANMDVLIVLATSIAYVYSLVILVVAVAEKAERSPVTFFDTPPMLFVFIALGRWLEHVVKSKTSEALAKLMSLQATEATVVTLGEDNVIIREEQVPMELVQRGDIIKVVPGGKFPVDGKVLEGNTMADESLITGEAMPVTKKPGSMVIAGSMNAHGSVLITATHVGNDTTLAQIVKLVEEAQMSKAPIQQLADRFSGYFVPFIIIISTVTLVAPSKGISQAEVVLRFAFQTSITVLCIACPCSLGLATPTAVMVGTGVAAQNGILIKGGKPLEMAHKIKTVMFDKTGTITHGVPKVSRVLLLVDMAALPLRKVLAVVGTAEASSEHPLGVAVTRYCKEELGTETLGCCTDFQAVPGCGISCKVSSVESILAQGECPQGPPTTHLNRVGSDPTETDAATQTFSVLIGNREWMRRNGLTVTSDVRDAMTDHEMKGQTAILAAIDGVLCGMIAIADSVKQEAALAVHTLKSMGVDVVLITGDNRKTARAIATQVGINKVFAEVLPSHKVAKVQELQNEGKRVAMVGDGVNDSPALAQADVGIAIGTGTDVAIEAADVVLIRNDLLDVVASIHLSRRTVWRIRLNLVLALIYNLIGIPVAAGVFIPIGVVLQPWMGSAAMAASSVSVVLSSLQLKCYRKPDLARYEAQAHGRMKPLSASQVSVHIGMDDRRRDSPRASPWDQVSYISQVSLTSLKSDKMSRHSGAADDRGDKWSLLLNDRDEEQGI"
ORIGIN      
ctgccccgtatgaaatacggatgagccctgttcccggtgagttcctgcagtcagctcgtccagaaaccaagccgttggtcccagggagaacaaagctgcaggaagcatggaattctcttacaccttcttgaaaatgcaagtcacgtggcccggaaaatacttttctcccctagtgatctgcaccccggagctgtggaagaggcagctgaagttattccaagaaagcgctctgagtttggcaataaaaggaagtgacatttcgcccctgcctccgggctggactcctgggagcgcacgggaggaaacggctgggtgtagggagatcactcctggcactgggcccccgtacatgcagccctggcacgcattgggccgtgtgcaaagatccccagtgccgaatgcaatgtgatgaataagaggatgccaattggtttgagtggagtagatcaacaagagcaaatatacatacagcggtgtgcagccttcccgagttcctggaggcttggctggcagccgctcctgggctggcccaggggcagaggggaacctgcctgacttgacacagcaggtgcctcccctctgctgattaggaggacgcttttggagtattttcttgtgacacgatcaaataacccagagaaggtgaactccgaggtaaaggcgtgaacgtggcgatggagaaagctggggaccagacgcccgggaaccccgagccatcctccctggcgactctgggtgacccacaggtgactctgctgtctgtccacaaacggtggtccttcaagaggagccctgggactgggggctccagcaggcctgtgatttcagaggagaattgccctcccctatcagaggaaggagaattttcacagaaggttttgaatggatcagaagagatcagttccaagcagatcctgtctgagctttcccagccagcgatgaagcagagctttgcctttgacaacagtggctacgaggatgacctggatggtgtgcgcccctcccagacagccacgggcaccatcagcatcgtgggcatgacctgccagtcatgtgtcaagtccatcgagggcagggtctccagtttgaatggcattgtgagcattaaggtttccctggagcagggcagcgctgaggtgaggtacatgccctcagtggtaagcctgatgcagatttgccatcagattgaagacatgggcttccaggccagtgtggccgagggaaaggccacctcctggccctccagggtctcgcccacctcggaggccatggtcaagcttcgggtggagggcatgacctgccagtcctgtgtcagctccatagaaggcaagatcgggaaactgcagggtgtcatgagggtccgcgtctcgctcagcaaccaggaggcagtcatcacttaccagccttaccttatccaaccccaagacctcagggaccacataaccgacatggggtttgaagccgtcatcaagaacaaggtggcccccgtgagcctgggacccatagatgtcaggcggcttcagagcaccctctcagcggcccctccagctcctgttaatcagaatgacaataactctgagacccggggcggccagggggtccccctgcacctgagagtggatggaatgcactgtaagtcttgtgtcctgaacatcgaagacaatatcggccggctccctggggttcagagtattcacgtgtccctggagagcaggactgcccgagtccagtacgacccttctctcatctccctgggggccctgtggagggccatcgaggccctgcctcctgggaactttaaagtctctcttcccaatggggcggaagggggtgggccagactccaggagccccccagtgcccaatccgccctgtaccgtgatgctggccatcgctggcatgacctgcaagtcctgcgtccagtccattgaaggcctgatttcccagagggcgggcgtgcaccagatctcagtctttttggctgaagggactgcagtggttctctacgatccatctcgaactcacccagaagaactgcgagccgcggtggaggatatgggattcgaggcctccatcctggccgaaaactgttccagcaaccacattgggaaccacagtgctgggagtgccatggggcacgcagcagctggcgcacccatgcccatgcagagaggggctccccagccaggggggctccatactaaccacatcccccgccagtcgcccaagtccctgctggcctccaccacggtggccgcaaagaagtgcttcctacagatctcaggcatgacctgtgcatcctgtgtatcgaacatagagaggaacctgcagaaagaacctgggatcctatccgtgctggttgccctgatggcgggaaaggcagaggtgaagtacaacccggaagtcatccagcccctggagatagcaaagctcgtccaggacctgggctttgaggcagcagtgatggaagactacacgggctcagatggtgacctcgagctgatgatcacggggatgacctgcgcctcctgtgttcacaacatagagtccaaactcaggaggacagacggcatcacctatgcctctgtggctctcgccaccagcaaagcccacgtgaagtttgatcctgaaattattggtccgcgggatattgtcaaacttatcgaggaaattggctttcacgcctccctggcccagaggatccccagcgctcatcacttggaccacaaggtggaaataaagcagtggaagaactcgttcctgtgcagcctggtgtttggcatccccgtcatgggtttaatgatctatatgttgatacccagccgtgagccccaggccacggtcctggaccacagcgtcatcccggggctgtccatcgtgaatctcatcttctttatcttgtgcacctttgtccagtttcttggcggctggtacttctatgtccaggcctacaaatctctgagacacggggtggccaacatggacgtgctcatcgtgctggccacgagcatcgcctacgtctactcgctcgtcatcctggtggtggccgtggccgagaaggccgagaggagccccgtgaccttctttgacacgccccccatgctcttcgtcttcatcgccctggggcggtggctggaacacgtggtgaagagcaaaacctcagaagcgcttgccaaactcatgtctctgcaagccacggaagccaccgtcgtgacccttggtgaagacaacgtgatcatcagggaggagcaggtgcccatggagctggtgcaacgaggtgacatcatcaaggtggtccctgggggcaagtttcccgtggacgggaaagtcctagaaggcaacaccatggccgatgagtccctcatcacaggagaggccatgcctgtcaccaagaagcccggaagcatggtaatcgccgggtccatgaacgcccatggctctgtgctcatcactgccacccacgtgggcaatgacaccaccttggcccagattgtgaagctagtagaagaggcccagatgtccaaggcacccattcagcaactggctgaccggtttagtggatattttgtcccatttatcatcatcatttcaactgtgacgttggtggcccccagcaagggcatctcccaggcagaggtggtcctgcggttcgcgttccagacgtccatcacggtgctctgcatcgcctgcccctgctcgctgggcctggccacgcccacggccgtcatggtgggcaccggggtggccgcccagaacggcatcctcatcaagggaggcaagcccctggagatggcccacaagataaagaccgtgatgttcgacaaaactggcaccattacccacggggtccccaaagtctcgcgggtcctcctgctcgtggacatggccgcactgcccctgcggaaggtgcttgctgtggtggggaccgcggaggccagcagcgagcaccccctgggcgtggcggtcaccagatactgtaaagaggaactcggcacggagaccctggggtgctgcacggacttccaggcggtgcctggctgtggaatcagctgcaaagtcagcagcgtggagagcatcctcgcccagggcgagtgcccacagggcccaccgaccactcacctgaacagagtcggcagcgaccccacagaaacagatgcggccacgcagaccttctctgtgctgatcggaaaccgggaatggatgagacgcaacggcctgaccgtcaccagcgacgtccgcgacgccatgaccgaccacgagatgaagggccagacggccatcctggcggccatcgacggtgtgctgtgcggtatgatcgccatcgcggactcggtcaagcaggaggccgccctggccgtgcacacgctgaaaagcatgggcgtggatgtggtgctcatcaccggggacaaccgcaagacagccagggccatcgccacccaggttggcatcaacaaagtctttgcggaggtgctgccttctcacaaggtggccaaggtccaggagctgcagaacgaggggaagagagtggccatggtgggtgatggcgtgaacgactccccagccctggcgcaggccgacgtgggcattgccatcggcacgggcaccgacgtggccattgaggcggccgacgtcgtcctcatcaggaatgacctactcgacgtggtggccagcattcatctctccaggaggaccgtctggagaatacgactcaacctggtgctggcgctgatctacaacctgatcgggatccccgtcgcagcaggtgtcttcatacccattggcgtcgtgctgcagccgtggatgggctcggcagccatggcggcctcctccgtgtccgtggtcctctcgtcactgcagctcaagtgctacaggaagccggacctggcgcggtacgaggcgcaggcgcacggccgcatgaagcccctgagcgcgtcccaggtcagcgtgcacatcggcatggacgaccgccggcgcgactccccgcgggcctcgccctgggaccaggtcagctacatcagtcaggtgtccctgacctccctcaagtccgacaagatgtcccggcacagcggcgcggccgacgacaggggcgacaagtggtctctgctcctgaatgaccgggacgaggagcagggcatctgaaagccgccgggggccggcccccgtggctgaggctccgagccagcagcggcagcagcaggcggccgggcccctccaggcctgggcgaatattctggattccctgcgtccagggggcgcgatttccccgatcccacgcgctcgggggaggcgtgcttgctcacgcccgtgggctcatcaaacaccttgctgtggcctcgagaagagggtcaagccctcctcgcatcccctgccttagcaattgtgacacggccagtctcatcgggtccaacatcttcgccgcgcccctccacagagctcataaaaacttcggggcctggctctttctgacagcacccgcgtgcatcgcctacctgagaccaccgtgtacctcaggtgcccccttgtttcctgctggcgccgtctcttcctcctctgcctttgacggtgggagtgggacaccctgtcatctgagggcagggctgacatcgtcacgtcccctctgctgctctccaaggggctcctgtgctcctgcctgaaccccttgcccacacgaccgccagagagcctgccacgcttctcctcggtgaccagaggtcttggttgcccgcgagccgcttctccctagagtcctggcttctcacgtgtaatccagtgtggttgctgactgtcgctgcctagctgggctgagggtctgagagcctgaggcttgagaaattcggcttcctgtggggtcctgggggaggcacgtggttcaagatcttgcttgcctggtttcaggggcttcggctgcatggcctgcggtgtgacagtcacctcacagggtctggcgtggggttcaggtctgtgctccccagagccgtgcagtcctggggcagtgagacccaagtaagaggacaccccagccctccacgcgcttcgacgcctgcacgtggagctggtgccttaggaagggggtgcccaccactcccaagggaacgtctgtttctaactttcagtggcctttatggttgcacgatagtcagagggacagcagtgggcccatggcagactccgagcttggtggtgattggcagagcctgtgggagtctgctaatagtagccaaatcttagactaagtgagtagagcctgttctcagtttcgagggggaagcccttatcacacacactttagttatttattgtcagttatttttcagggggatataagcactttttatcgcttacctctaatcctcacaacgaactagcaaagtagatattgtccacattttgcaggcgggaaacaggctcagagaggctagtaatccctcccaggatcacacagccagtgtgcatgccagagcagggatctgaattcacagccacgggccttgaagtcttttctttaatttggctctactgtcaatattttgtttgataagaagcaacaaggaaaaggcccttgttcctggaagaacaaagctgccaggtgatgtattcgctgaactggcttgaaatgtgaccatgaggtcatgtcacgttgcctttggatagctcctttccatttgcatataattgagtctgtgctgtgtctcatcctctaaactccacgtgcagggtggtggtgtggttttctgtttccagtcttcttccctagccccttcctcctgtgttcccaattgtgtcctttctctgctcccagctcctgcttggggaatgtttcctgtttccccccaaggaagctaatcattatctaaagaatccaattctatcagtttttcaaaaagcttttaggaccataaatgttatgtttataggaacatggagatatttatataattgtacagaagataaccttttagctgttcaaaagtgtcaggaattttttttgttgtttgtttttttggtcaggaaagaagaattcctatttcaaaaacattcta
//

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If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596. [Full Text]