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2024-04-29 23:26:02, GGRNA.v2 : RefSeq release 222 (Jan, 2024)

LOCUS       XM_054722862            1945 bp    mRNA    linear   MAM 31-MAR-2023
DEFINITION  PREDICTED: Eptesicus fuscus nuclear envelope integral membrane
            protein 2 (NEMP2), mRNA.
ACCESSION   XM_054722862
VERSION     XM_054722862.1
DBLINK      BioProject: PRJNA948460
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Eptesicus fuscus (big brown bat)
  ORGANISM  Eptesicus fuscus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Chiroptera; Microchiroptera;
            Vespertilionidae; Eptesicus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_072483) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_027574615.1-RS_2023_03
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 03/28/2023
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 36% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1945
                     /organism="Eptesicus fuscus"
                     /mol_type="mRNA"
                     /isolate="TK198812"
                     /db_xref="taxon:29078"
                     /chromosome="11"
                     /sex="male"
                     /tissue_type="liver"
                     /dev_stage="adult"
                     /country="USA: Silver Falls Park - Crosbyton, TX"
                     /collection_date="2020-07-16"
                     /collected_by="David Ray"
     gene            1..1945
                     /gene="NEMP2"
                     /note="nuclear envelope integral membrane protein 2;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 3 Proteins"
                     /db_xref="GeneID:103290640"
     CDS             23..1945
                     /gene="NEMP2"
                     /codon_start=1
                     /product="nuclear envelope integral membrane protein 2"
                     /protein_id="XP_054578837.1"
                     /db_xref="GeneID:103290640"
                     /translation="
MRVRAGPWWLLPWALLAAGAGRAKEPLGAPLAVSVPRCRALKEMDVIETSASDCYCYHQNPQTEWKYIWSTVQVKVASADPLSLVYITDRHGCRDPETVLAAIECAVHALWTLRESHEIAVNIRPHEGTVCFSVRPAGRHSVHVTRSAVDLRLVLLFVAGIALLRSAARLSRSPAFYYCSGTALGVLMTPVFLLLLARRSIPKYSTFGAVMVGCWFASVYVVCQGMEHLPWLWCEHRMYVVGYVLAVGSLSFAACYRRGPLAEERSRRLLAWTLRLLGLALTRCGAPVPGAAWAAAGLLLLPRALRCPARALRNVKKWLRSRRPAFRYLTEEEYQEQADAATARALEELRQACRRPDFPSWLAVSRLQAPRKFADFVLGGSHLSPEEMRLHEEQYSLGGTFLEEQPFHLGRGQPPEACRSGGGIGASAGAGRPARRVETGPACSRHIETGPACSRRVETDLECSRHIETGLECSRHIETDLECSRHIETGPACSRHIETGPECSRHIETDLECSRHIETDPACSRHIETDLECSRHIETGPACSRHIETGPECSRHIETDLECSRHIETDLECSRHIETDPECSRHIETDPECSRHIETGPECSRHIETGPACSSASTCCSGRGSQVSSLHAECSRTARP"
     misc_feature    443..1177
                     /gene="NEMP2"
                     /note="NEMP family; Region: NEMP; pfam10225"
                     /db_xref="CDD:431151"
ORIGIN      
gagggacggaggggccggcgggatgcgggtgcgcgcgggcccgtggtggctgctgccctgggcgctgctggccgcgggcgcggggcgcgcgaaggagccgctcggggcgccgctggcagtttcagttccgaggtgcagagctttgaaggaaatggatgtaattgaaacttctgcgtcagactgttactgctaccatcagaacccccaaaccgagtggaaatacatatggtcaacggtgcaggtgaaggtcgccagtgccgacccgctcagcctggtgtacatcacggacagacacggctgcagggaccccgagacggtgctcgctgccatcgagtgcgcggtccacgcgctctggaccctgcgcgagtctcacgaaatagccgtgaacatccgtccacacgaggggaccgtgtgcttctccgtgaggccggccggcaggcactcggtgcacgtgacgcgcagcgccgtggatctcaggctcgtcctcctgtttgtggccggcatcgccctcttgcgctccgcggcgcgcctgagtcgaagccctgctttctattactgctcggggacggcgctgggcgtgctgatgactccggtcttcctgctgctgctggcgagaaggtccatccccaagtatagcacctttggggcagtcatggttggttgttggtttgcctcggtgtatgtggtgtgccaggggatggagcacctgccgtggctgtggtgtgagcacaggatgtatgtcgtaggctatgtcctggcagtggggtccctcagcttcgctgcctgttacagacgcgggcccctggccgaggagaggagccggcgcctcctggcgtggacgctgcggctgctgggcctggcgctgacccgctgcggcgcccccgtgcccggggccgcctgggccgccgccggcctcctgctgctgccccgggctctgcgctgcccggcgagagctctcaggaacgtgaagaagtggctgaggtcccggaggccggcgttcaggtacctgaccgaggaggagtaccaggagcaggccgacgccgcgaccgcccgggccctggaggagctgcgccaggcctgccgccggcccgacttcccgtcctggctggccgtgtcccggctccaggcgccgagaaagttcgcggacttcgtcctcggaggaagccacttgtcgccggaagaaatgcgtctccatgaagagcagtacagcctggggggcaccttcctggaggagcagccctttcacctggggcgggggcagccgcctgaagcctgtcggtccggaggcggcattggtgccagcgcaggtgctgggagaccggcccggcgtgtagagaccggcccggcgtgctcccggcacatagagaccggcccggcgtgctcccggcgtgtagagaccgacctggagtgctcccggcacatagagaccggcctggagtgctcccggcacatagagaccgacctggagtgctcccggcacatagagaccggcccggcgtgctcccggcacatagagaccggcccggagtgctcccggcacatagagaccgacctggagtgctcccggcacatagagaccgacccggcgtgctcccggcacatagagaccgacctggagtgctcccggcacatagagaccggcccggcgtgctcccggcacatagagaccggcccggagtgctcccggcacatagagaccgacctggagtgctcccggcacatagagaccgacctggagtgctcccggcacatagagaccgacccggagtgctcccggcacatagagaccgacccggagtgctcccggcacatagagaccggcccggagtgctcccggcacatagagaccggcccggcgtgctccagtgcgtccacgtgctgctcaggaaggggctctcaggtcagctcgctccacgccgagtgcagcaggactgctcggccgtga
//

by @meso_cacase at DBCLS
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If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596. [Full Text]