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2024-05-04 01:54:46, GGRNA.v2 : RefSeq release 222 (Jan, 2024)

LOCUS       XM_054468964             651 bp    mRNA    linear   PRI 11-APR-2023
DEFINITION  PREDICTED: Pongo pygmaeus claudin 17 (CLDN17), mRNA.
ACCESSION   XM_054468964
VERSION     XM_054468964.1
DBLINK      BioProject: PRJNA945458
KEYWORDS    RefSeq.
SOURCE      Pongo pygmaeus (Bornean orangutan)
  ORGANISM  Pongo pygmaeus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Pongo.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_072394) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_028885625.1-RS_2023_04
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 04/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..651
                     /organism="Pongo pygmaeus"
                     /mol_type="mRNA"
                     /isolate="AG05252"
                     /db_xref="taxon:9600"
                     /chromosome="21"
                     /sex="male"
                     /tissue_type="fibroblast"
     gene            1..651
                     /gene="CLDN17"
                     /note="claudin 17; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 2 Proteins"
                     /db_xref="GeneID:129022693"
     CDS             1..651
                     /gene="CLDN17"
                     /codon_start=1
                     /product="claudin-17"
                     /protein_id="XP_054324939.1"
                     /db_xref="GeneID:129022693"
                     /translation="
MAFYPLQIAGLVLGFLGMVGTLATTLLPQWRVSAFVGSNIIVFERLWEGLWMNCIRQARVRLQCKFYSSLLALSPALETARALMCVAVALSLIALLIGICGMKQVQCTGSNERVRAYLLGTSGVLFILTGIFVLIPVSWTANIIIRDFYNPAIHIGQKRELGAALFLGWASTAVLFIGGGLLCGFCCCNRKKQGYRYPVPGYCVPHTDKQRNNDNA"
     misc_feature    16..546
                     /gene="CLDN17"
                     /note="PMP-22/EMP/MP20/Claudin family; Region:
                     PMP22_Claudin; cl21598"
                     /db_xref="CDD:451326"
ORIGIN      
atggcattttatcccttgcaaattgctgggctggttcttgggttccttggcatggtagggactcttgccacaacccttctgcctcagtggagagtatcagcttttgttggcagcaacattattgtctttgagaggctctgggaagggctttggatgaactgcatccgacaagccagggtccggttgcaatgcaagttctatagttccttgttggctctgtcgcctgccctggaaacagcccgggccctcatgtgtgtggctgttgctctctccttgatcgccctgcttattggcatctgtggcatgaagcaggtccagtgcacaggctctaacgagagggtcagagcataccttctgggaacttcaggagtcctcttcatcctgacgggcatcttcgttctgattccggtgagctggacagccaacataatcatcagagatttctacaatccagccatccacataggtcagaaacgagagctgggagcagcacttttccttggctgggcaagcactgctgtcctcttcattggagggggtctgctttgtggattttgctgctgcaacagaaagaagcaagggtacagatatccagtgcctggctactgtgtgccacacacagataagcaaagaaacaatgacaatgcttag
//

by @meso_cacase at DBCLS
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If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596. [Full Text]