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2024-04-29 13:50:02, GGRNA.v2 : RefSeq release 222 (Jan, 2024)

LOCUS       XM_054040719            1395 bp    mRNA    linear   VRT 06-MAR-2023
DEFINITION  PREDICTED: Malaclemys terrapin pileata zinc finger and SCAN
            domain-containing protein 32-like (LOC128843686), mRNA.
ACCESSION   XM_054040719
VERSION     XM_054040719.1
DBLINK      BioProject: PRJNA938469
KEYWORDS    RefSeq.
SOURCE      Malaclemys terrapin pileata
  ORGANISM  Malaclemys terrapin pileata
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira;
            Testudinoidea; Emydidae; Malaclemys.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_071513) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_027887155.1-RS_2023_03
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 03/02/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1395
                     /organism="Malaclemys terrapin pileata"
                     /mol_type="mRNA"
                     /isolate="rMalTer1"
                     /sub_species="pileata"
                     /db_xref="taxon:2991368"
                     /chromosome="9"
                     /sex="male"
                     /tissue_type="blood"
                     /dev_stage="juvenile"
                     /country="USA: Alabama"
                     /lat_lon="30.343790 N 88.131310 W"
                     /collection_date="2021-04-10"
                     /collected_by="Iwo Gross"
     gene            1..1395
                     /gene="LOC128843686"
                     /note="zinc finger and SCAN domain-containing protein
                     32-like; Derived by automated computational analysis using
                     gene prediction method: Gnomon."
                     /db_xref="GeneID:128843686"
     CDS             481..930
                     /gene="LOC128843686"
                     /codon_start=1
                     /product="zinc finger and SCAN domain-containing protein
                     32-like"
                     /protein_id="XP_053896694.1"
                     /db_xref="GeneID:128843686"
                     /translation="
MKDRGHNRDAKQCHVKIKELRQAYQKNREAKGHSRSEPQTCRFYDELHAMLGGAATSTPTLCFDSINGESRNTEAGFGDEEDDDEDNEESSQQGSGETSFPNSQDMFFTLDLEPVTPEPTQGVLLDSEGREGTSAANVSPSQRLAKIRR"
     misc_feature    <481..618
                     /gene="LOC128843686"
                     /note="Myb/SANT-like DNA-binding domain; Region:
                     Myb_DNA-bind_4; pfam13837"
                     /db_xref="CDD:433516"
ORIGIN      
ttaagcctggacccgtccacatgacgaagctctttttttcgacttaaagggttctttaaatcgatttctttactccacctccgactaggggattagtgctgaaatcagccttgccaggatgaatttggggtagtgtggacgcaattcgacggtattggcctcctggagctatcccagagtgctccattgtgaccgctctggacagcgctctcaactcagatgcactggccaggtagacaggaaaaggcccgtgaacttttgaatctcatttcctgtttagccagcatggcaaggtgcaggtgagtgcagatttcatcagcagaggtgaccatgatggagtcccaggatcacaaaagagctccagcatggaccgaatgggaggtatgggatctgctcaccatatggggagacgaatccatgctagctgaactccattccagtaaatgaaatgccaaaacatttgaaaaagtctcaaagggcatgaaggacagaggccataacagggacgcaaagcagtgccacgtgaaaattaaggagctaaggcaagcctaccaaaaaaacagagaggcaaagggccactccagatcagagccccaaacatgccgcttctatgatgagctgcatgccatgttagggggtgcagccaccagtaccccaaccctgtgctttgactccatcaatggagaatcacgcaacacagaagcgggttttggggacgaggaagatgatgatgaagacaatgaagagagctcacagcaaggaagcggagaaaccagtttccccaacagccaagatatgtttttcaccctggacctggagccagtaacccccgaacccacccaaggtgtgctcctggactctgaaggcagagaagggacctctgctgcaaatgtttctccttcgcagaggctagcaaagattagaaggtgaaaaaaacgcactcgggatgaaatgttctctgagctcctgctgtcctcccacattgacagagcacagaagaatgcgtggaggcagacaatatcagagtgcaggaaagcacaatatgaacgcaagaagagattgtgggctgaagagagtaagtggcgggctgaagatgataggtggcatcagcttgctgacagaaggcaagagtcgatgctcagactgctggaagatcaaactcatatgctccagcgtatggttgagctgcaggaaaggcagcaggagcacagactgccactacagcccctgtgtaaccaatagccctcctccccaagttccatagcctcctcacccagatgcccaagaacgcggtggggaggcctctggccacccagccactccaccccagaggatttcccaagcaacagaaggctggccttcaataagtttttaagttttaaagtgaagtgtggc
//

by @meso_cacase at DBCLS
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If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596. [Full Text]