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2024-04-29 15:43:02, GGRNA.v2 : RefSeq release 222 (Jan, 2024)

LOCUS       XM_053798483            1089 bp    mRNA    linear   INV 23-FEB-2023
DEFINITION  PREDICTED: Cherax quadricarinatus uncharacterized LOC128703705
            (LOC128703705), mRNA.
ACCESSION   XM_053798483
VERSION     XM_053798483.1
DBLINK      BioProject: PRJNA923327
KEYWORDS    RefSeq.
SOURCE      Cherax quadricarinatus
  ORGANISM  Cherax quadricarinatus
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Crustacea;
            Multicrustacea; Malacostraca; Eumalacostraca; Eucarida; Decapoda;
            Pleocyemata; Astacidea; Parastacoidea; Parastacidae; Cherax.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_069487) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_026875155.1-RS_2023_01
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 01/17/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1089
                     /organism="Cherax quadricarinatus"
                     /mol_type="mRNA"
                     /isolate="HC-2022"
                     /db_xref="taxon:27406"
                     /chromosome="89"
                     /sex="male"
                     /tissue_type="muscle"
     gene            1..1089
                     /gene="LOC128703705"
                     /note="uncharacterized LOC128703705; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:128703705"
     CDS             346..1089
                     /gene="LOC128703705"
                     /codon_start=1
                     /product="uncharacterized protein LOC128703705"
                     /protein_id="XP_053654458.1"
                     /db_xref="GeneID:128703705"
                     /translation="
MPLSSDTSAALSLLERIQRSMKETDETKLSDQCSNDLNTLISVLESPVFRGIINIQESLKELKKQVSQHPSIVPTDFDISREGKLILHVSPEGGHQLEFAVHGEPSTITLQPAPALITQVDHEDAAPSKATESIELQELCHLQKQQQQQDEEELVEAKAKPEEVKKDEGVRLVDEDEMPPAITNATLDQELQRAIHTAAQGRDVHHIQLYKPEGSSLGFSVVGLRSEKRGELGIYVQGIQPTGIAAQ"
     misc_feature    955..>1086
                     /gene="LOC128703705"
                     /note="PDZ domain, also called DHR (Dlg homologous region)
                     or GLGF (after a conserved sequence motif). Many PDZ
                     domains bind C-terminal polypeptides, though binding to
                     internal (non-C-terminal) polypeptides and even to lipids
                     has been demonstrated; Region: PDZ; cl00117"
                     /db_xref="CDD:444702"
ORIGIN      
aacagtgcgagaaggtgtgtgtgtgtttatgctagcagttatcgactttgatggtgttgtttggaagtgatatagatcaaaacctatatttcatagtatataaggttaaattgtatatatcccatgtgtaaaattaaaaatccattgtaaataaccccttgaaatggtgtaaaataagagtggcatccccccgtgtttgagggaggctcctctcttcaaggttatcctctcgtcttgggacggtgaacttcaagaagagattgtgatgttgtgatcgaggtgggataactagtgccagccttgttaacatcacgccggtcttccatctgtgccaagagaaacatcatgccgctcagttcagatacctcggcggcgctgtccctgctggagcgcatccagcgctccatgaaggaaacagacgagaccaagttgtcagaccagtgcagcaacgacctcaacacgctcatctccgtcctagagagtcccgtcttcaggggcatcatcaacatacaggagtcgctgaaggagttgaagaagcaggtgtcacaacacccatccatagtaccgacggactttgacatcagtcgtgagggaaagttgatccttcacgtctccccagaaggtggacaccagctggagtttgctgttcacggtgaaccatctaccatcacactacaacctgcaccagctctcattacccaggttgatcatgaagatgcagctcccagcaaggctacagagagcatagagctgcaggaactgtgccacctgcagaaacagcagcagcagcaggatgaggaggaacttgtggaagcaaaggcgaaacctgaggaggtgaagaaagatgagggagtgaggttggtggatgaggatgagatgccgccagccatcaccaacgccactctggaccaggagctacagcgagccatacacactgctgcccagggcagagatgtccatcatattcagctgtacaagcctgagggaagcagtctgggcttcagcgtggtgggtctcagatcagagaagagaggcgagctgggtatctacgtccagggaattcaacccaccggcatcgctgctcagtga
//

by @meso_cacase at DBCLS
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If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596. [Full Text]