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Previous release (v1)
2025-12-08 09:46:48, GGRNA.v2 : RefSeq release 232 (Sep, 2025)
LOCUS XM_053702501 1077 bp mRNA linear VRT 04-MAR-2023
DEFINITION PREDICTED: Bombina bombina keratin-associated protein 16-1-like
(LOC128649299), mRNA.
ACCESSION XM_053702501
VERSION XM_053702501.1
DBLINK BioProject: PRJNA925521
KEYWORDS RefSeq; includes ab initio.
SOURCE Bombina bombina (fire-bellied toad)
ORGANISM Bombina bombina
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Amphibia; Batrachia; Anura; Bombinatoridae; Bombina.
COMMENT MODEL REFSEQ: This record is predicted by automated computational
analysis. This record is derived from a genomic sequence
(NC_069499) annotated using gene prediction method: Gnomon.
Also see:
Documentation of NCBI's Annotation Process
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI RefSeq
Annotation Status :: Updated annotation
Annotation Name :: GCF_027579735.1-RS_2023_03
Annotation Pipeline :: NCBI eukaryotic genome annotation
pipeline
Annotation Software Version :: 10.1
Annotation Method :: Gnomon; cmsearch; tRNAscan-SE
Features Annotated :: Gene; mRNA; CDS; ncRNA
Annotation Date :: 03/03/2023
##Genome-Annotation-Data-END##
##RefSeq-Attributes-START##
ab initio :: 100% of CDS bases
##RefSeq-Attributes-END##
FEATURES Location/Qualifiers
source 1..1077
/organism="Bombina bombina"
/mol_type="mRNA"
/isolate="aBomBom1"
/db_xref="taxon:8345"
/chromosome="1"
/sex="male"
/tissue_type="blood, muscle, kidney, liver"
/dev_stage="adult"
/geo_loc_name="Poland: Ksiaz Wielki"
/lat_lon="50.433333 N 20.150000 E"
/collection_date="2020-08"
gene 1..1077
/gene="LOC128649299"
/note="keratin-associated protein 16-1-like; Derived by
automated computational analysis using gene prediction
method: Gnomon. Supporting evidence includes similarity
to: 1 Protein"
/db_xref="GeneID:128649299"
CDS 1..1077
/gene="LOC128649299"
/codon_start=1
/product="keratin-associated protein 16-1-like"
/protein_id="XP_053558476.1"
/db_xref="GeneID:128649299"
/translation="
MCEHAMCERAMCEHAISERAMCERDICEHAMCEHAMCEHAMCVHAMYVRDICEHAISERAMCERDICECAISEHAMCEHAMCVRAMCECAICECAMCVRAICECAISERAMCERDICERAISERAMCERDICERAISKRAMWERAMCKRAMCEHDICEHAISERAMCERDICERAISKRAMCERDICEHAISERAMCECDICERAISKRAMCERAMCERDICERAISERAMCERDICERAISKRAMCERDICERAISERAMCERDICEHAIRERAMCVRDICEHAIRERAMCERDICERAISKRAMWERAMCERAMCEHDICERAISERAMCERAIREHAMCERDICEHAMCRLTIFP"
ORIGIN
atgtgtgagcatgccatgtgtgagcgtgccatgtgtgagcatgcaataagtgagcgtgccatgtgtgagcgtgacatatgtgagcatgccatgtgtgagcatgccatgtgtgagcatgccatgtgtgtgcatgccatgtatgtgcgtgacatatgtgagcatgcaataagtgagcgtgccatgtgtgagcgtgacatatgtgagtgtgcaataagtgagcatgccatgtgtgagcatgccatgtgtgtgcgtgccatgtgtgagtgtgcaatatgtgagtgtgccatgtgtgtgcgtgccatatgtgaatgtgcaattagtgagcgtgccatgtgtgagcgtgacatatgtgagcgtgcaataagtgagcgtgccatgtgtgagcgtgacatatgtgagcgtgcaataagtaagcgtgccatgtgggagcgtgccatgtgtaagcgtgcaatgtgtgagcatgacatatgtgagcatgcaataagtgagcgtgccatgtgtgagcgtgacatatgtgagcgtgcaataagtaagcgtgccatgtgtgagcgtgacatatgtgagcatgcaataagtgagcgtgccatgtgtgagtgtgacatatgtgagcgtgcaataagtaagcgtgccatgtgtgagcgtgccatgtgtgagcgtgacatatgtgagcgtgcaataagtgagcgtgccatgtgtgagcgtgacatatgtgagcgtgcaataagtaagcgtgccatgtgtgagcgtgacatatgtgagcgtgcaataagtgagcgtgccatgtgtgagcgtgacatatgtgagcatgcaataagggagcgtgccatgtgtgtgcgtgacatatgtgagcatgcaataagggagcgtgccatgtgtgagcgtgacatatgtgagcgtgcaataagtaagcgtgccatgtgggagcgtgccatgtgtgagcgtgcaatgtgtgagcatgacatatgtgagcgtgcaataagtgagcgtgccatgtgtgagcgtgcaataagggagcatgccatgtgtgagcgtgacatatgtgagcatgccatgtgtaggctgaccatatttccttga
//
by
@meso_cacase at
DBCLS
This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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