2024-05-06 11:01:12, GGRNA.v2 : RefSeq release 222 (Jan, 2024)
LOCUS XM_052376312 3924 bp mRNA linear INV 29-NOV-2022 DEFINITION PREDICTED: Dreissena polymorpha GRIP and coiled-coil domain-containing protein-like (LOC127845414), transcript variant X5, mRNA. ACCESSION XM_052376312 VERSION XM_052376312.1 DBLINK BioProject: PRJNA903932 KEYWORDS RefSeq. SOURCE Dreissena polymorpha ORGANISM Dreissena polymorpha Eukaryota; Metazoa; Spiralia; Lophotrochozoa; Mollusca; Bivalvia; Autobranchia; Heteroconchia; Euheterodonta; Imparidentia; Neoheterodontei; Myida; Dreissenoidea; Dreissenidae; Dreissena. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_068363) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: Dreissena polymorpha Annotation Release 100 Annotation Version :: 100 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..3924 /organism="Dreissena polymorpha" /mol_type="mRNA" /isolate="Duluth1" /db_xref="taxon:45954" /chromosome="9" /sex="male" /tissue_type="Whole animal" /dev_stage="adult" /country="USA: Lake Superior, Duluth, MN" /lat_lon="46.78671 N 92.09114 W" /collection_date="2017-06" gene 1..3924 /gene="LOC127845414" /note="GRIP and coiled-coil domain-containing protein-like; Derived by automated computational analysis using gene prediction method: Gnomon." /db_xref="GeneID:127845414" CDS 35..1882 /gene="LOC127845414" /codon_start=1 /product="GRIP and coiled-coil domain-containing protein-like isoform X4" /protein_id="XP_052232272.1" /db_xref="GeneID:127845414" /translation="
MGKSGCLPPGSCRWIVQFKKSMNARMAKFRNDFRKKFFRDNKHLGTLSADKLLNETGTSDMEITKTTSKPSANSTVSQKKESTENLTKRHNVDTTGGHVIKDTNTTKEHVVIDTDSKNEDVIIDTDTTNEHFVIDTDTTNEHVVINTDTDNEHVVIATDTTNEQVVIDTDTTNECVAMDTETTNEHVAIDTDTSKVHVVIDTDINNEDVILYTDTTNGHVVIDTDTNEHVVNDTDIINEHVVIDTDTTNGHVVIDTDTTNENVVIDADITKENVVIETDTSNEHVVIDTDTTNEYVIIDTDTTNGHVVIDTDTTNEHVVIATDTTNENVVIETDTTNEHVVIYTDTTTENVVIDAETTNENVVIETDTSNEHVVIDTDTTNEHVVIATDSTNENVVIETDTTNEHVVIDTDTTNENVVIDTDTTNENVVIETDTSNEHVVIDTDTTNEYVVIDTDTTNGHVVIDTDTTNEHVVIATDTTNENVVIETDTTNEHVVIYIDTTNGHVVIDTDNTNEYNAITVFEASTEIVLKEHDGNVETTVEHVVKDTGSVPVSSSVLSALADGAVKSSLYEIDDVNKSAVVPRSAGKARKTRKTLNFFLRMFGLQGWSCFCDVVM"
polyA_site 3924 /gene="LOC127845414" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN
tgcattgaacaacatacacggcaactacaaaaaaatggggaagtcaggatgtttaccgcccggcagctgtcggtggatcgtacagttcaagaagtcaatgaatgccaggatggcgaaattccggaatgactttcggaagaagttttttcgcgacaacaagcatctgggaaccctgagtgccgacaaactcctcaacgagacgggaaccagtgatatggaaatcacgaaaacgacgtccaagccttcagcgaacagtactgtctctcaaaagaaggagtccacagaaaacttgacgaagagacacaatgtcgacactaccggcggacacgttatcaaggataccaataccaccaaagaacatgttgtcattgataccgacagcaaaaacgaagacgttatcattgataccgacaccaccaatgaacattttgtcattgataccgacaccaccaacgaacacgttgtcattaataccgacaccgacaacgaacacgttgtgattgctaccgacaccaccaacgaacaagttgtcattgataccgacaccacgaacgaatgcgttgccatggataccgaaaccaccaatgaacacgttgccattgataccgacacctccaaagtgcacgttgtcattgataccgacatcaacaacgaagatgtaatcctttataccgacacgaccaacggacacgttgttattgataccgacaccaacgaacacgttgtcaacgataccgacatcatcaacgaacacgtggtcattgataccgacacgaccaacggacacgttgtcattgataccgacaccaccaacgaaaacgttgttattgatgccgacatcaccaaagaaaacgttgtcattgaaaccgacacgtccaacgaacacgttgtcattgataccgacaccaccaacgaatacgtgatcattgataccgacacgaccaacggacacgttgtcattgataccgacaccaccaacgaacacgttgtgattgctaccgacaccaccaacgaaaacgttgtcattgaaaccgacacgaccaacgaacacgttgtcatttataccgacaccaccaccgaaaacgttgtcattgatgccgaaaccaccaacgaaaacgttgtcattgaaaccgacacgtcgaatgaacacgttgtcattgataccgacaccaccaacgaacacgttgtgattgctaccgacagcaccaacgaaaacgttgtcattgaaaccgacacgaccaacgaacacgttgtcattgataccgacaccaccaatgaaaacgttgtcattgataccgacaccaccaacgaaaacgttgtcattgaaaccgacacgtccaacgaacacgttgtcattgataccgacaccaccaacgaatacgtggtcattgataccgacacgaccaacggacacgttgtcattgataccgacaccaccaacgaacacgttgtgattgctaccgacaccaccaacgaaaacgttgtcattgaaaccgacacgaccaacgaacacgttgtcatttatatcgacaccaccaacggtcacgtggtcattgataccgacaacaccaacgaatacaacgccatcaccgtctttgaggcgtctaccgagatcgtcctgaaggaacacgacggcaatgtcgaaaccaccgtcgaacacgttgtcaaggacacaggcagcgttcccgtatcgtccagcgttttaagcgcgctcgccgatggcgcagtgaagtcaagtctgtacgagattgacgacgtcaacaaatccgctgtggtcccccggtccgccggaaaggctcgcaaaacacgaaagactctgaacttcttcctaaggatgtttgggctgcaaggttggagctgtttctgcgacgttgtcatgtagaggaaacttaagccatagtctcatataagcacggatgctaaggtggactggtgcatttttgagcgtcgactgtattccaaagaccatcaaccggagaaataactttttataacttgtaggtttattttacatgattccatttctgcaattttcactttatcattatccctcagcacataatattgaacacattattatctatgatattcgcgtcttaaatttcatcaaatattagtccacatgacattgttaatacttataactaatcttcatgaaaatgacatgtccatagaatatatctttcaatgacaatgttcatgtcatgtcgtctgccaggacatagatccggcttcagagctgatgtaggccggacgatattagcgttggtgctttgcttccattgtgattgcgctcgaataaagcttcgacgccctatccatgagcgggttgtcgtttcgccattgtcctggtttggtgttgtgataattgtccacctggtcagtttgatgctcattctcagttccatagcgcagtctcaaaagattcgggacgcaaatggaaggcagcacaatttacgtcatcgcctctggagaatgcagaagtgtgtgtagacatcgaaagcgattaacatgaatcccaaacacgttttcaacaatccgtcgcccctttggaaagtcggtagttgaaaactatttgggaatgtgccatgtttttgttagaaaaaggtttaacggaccacttcttccaggcaaatgcgccattcgcagccatgtagaacgcattgatgtgtcgtcgatggcaaatttttcaagattagataggcacaccgatcccttgtcgatagtttgcatcaggtcactgtcgttgagcgctttagcaccactgactgattgattactgcctacttccacttaaatgaacttgtagtcggcgtcacccaacgccatatagttgaatggaatggtaacctttgtagttgtagtgcaagaggcgtgatggttccatgaactacaacagcaatggcaaacattacattaccctgatagccttgaccgacgccgactacaagttcatttggttggaagagggcaacagcaaatcagccgtggtgctaaaatgttcaacaacagcgagctgaagaaaaccatagacaagggagtgttatgctttcctgatcctgaaaatttgccgaaagacgactcatcaatccgtttctacatgtctgcggtagacgcattcgcatggaagaatgggcccgtaaaacatttaactttgaaatacatgtcacattccgagagagtcttcaactatcggctgttcaatggggcgacggattgtggaaattgtgtttgggattcttggccatcgctttcgatgtctacacacacttctgcagtctccagatgaggtgacatctatggtactgtcttgcatctgcgtaccgaatctcttgagactgtgcgatggaaataagaatgtgagtgtagctgaccaggatgacaacaataccaacatcataccaggacaatgacgaaacgttaacccgcttaaagattgggtgtcgacgctttctatgaaatcaaccacagtggaagcaaagaaccaatgtgaatatcttcgagtccacttcagctcagaagccggatctgtgtcatgtcaggacgacatgatgtgaacattgtaattgtacgaaatactctatagatttgtcattttcatgtagtttggttataattacgaacacttttttgtggacttatatgcaatgaaattattgaatatactcaattttatatccagttgggataaagatatttagtttcatagtaaaaaacactcgtttattctaatatttcgcccaaatgggctttatcaaagtttgcaaatacgaattttctacataattgtaactgtcatgtacatcaataaagtaaatcagggacgatttagaactgccgtagctatctgtgcttatatgggacttgggtttaatatatctagaaaaaatgtttgtataaattagaaataaatgtttttgattt
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Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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