2024-05-05 12:59:28, GGRNA.v2 : RefSeq release 222 (Jan, 2024)
LOCUS XM_049922341 2099 bp mRNA linear INV 05-AUG-2022 DEFINITION PREDICTED: Schistocerca cancellata uncharacterized LOC126175514 (LOC126175514), transcript variant X4, mRNA. ACCESSION XM_049922341 VERSION XM_049922341.1 DBLINK BioProject: PRJNA856670 KEYWORDS RefSeq. SOURCE Schistocerca cancellata (South American locust) ORGANISM Schistocerca cancellata Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Polyneoptera; Orthoptera; Caelifera; Acrididea; Acridomorpha; Acridoidea; Acrididae; Cyrtacanthacridinae; Schistocerca. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_064628) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: Schistocerca cancellata Annotation Release 100 Annotation Version :: 100 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2099 /organism="Schistocerca cancellata" /mol_type="mRNA" /isolate="TAMUIC-IGC-003103" /isolation_source="physical" /specimen_voucher="TAMUIC-IGC-003103" /db_xref="taxon:274614" /chromosome="3" /sex="female" /tissue_type="Whole body" /dev_stage="adult" /country="Argentina" /collection_date="2021-03-08" /collected_by="Rick Overson" /identified_by="Rick Overson" gene 1..2099 /gene="LOC126175514" /note="uncharacterized LOC126175514; Derived by automated computational analysis using gene prediction method: Gnomon." /db_xref="GeneID:126175514" CDS 14..2083 /gene="LOC126175514" /codon_start=1 /product="uncharacterized protein LOC126175514 isoform X3" /protein_id="XP_049778298.1" /db_xref="GeneID:126175514" /translation="
MEGTSNTTQPSDLKAQHRRFFKLRVCPHLEQAKELKFLSSNLLSYCKDLANEDTGTSTAATTEVTSARKLTTTAAAGTSEGPFDTSRVPDAEQAATSLTQQEEPSSHISSLTKLREVCRHLNQVKNKMFGPFLQGLCKHVGEPDTDLSAESIGTVTATLVTKDADAITEAVTAVTLNTANTYGAQSAVTSVEPETGVTYNISDTELGLLVCQNFHLIDNSVSFIARRTLGLYCKIMNPTDTETSTAATTEVMSARKLTTTAAAGTSEGPFDTSRVPDAEQAATSLTQQEEPSSHISSLTKLREVCRHLNHVKNKMFGPYLPGLCKHVDEPDTDLSAESIGTVTATLVIKDADAITEAVTAVTLNTANTYGAQSAVTSVEPETGVTYNISDTELGLLVCQNFHLIDNSVSFIARRTLGLYCKIMNPTDTDLSAESIGTVTATLVTKDADAITEAVTAVTLNTANTYGAQSAVTSVEPETGVTYNISDTELGLFVCQNFHLIDNSVSFIARRTLGLYCKIMNPTDTGTSTAATTEVMSARKLTTTAAAGTSEGPFDTSRVPDAEQAATSLSQQEEPSSHISSLTKLREVCRHLNQVKNKMFGPFLPGLCKHVDEPGSTPQPCKLMTSSPSGEPIKESNDESVDEAGDESTDEAAQPTTLLTDTRRHESIDESINKSYEECGLELYDDIVTY"
ORIGIN
agagaaaagggccatggaaggtacatcaaacacgacgcagccttcggatctcaaggctcagcataggagatttttcaaacttagagtttgtcctcatctggaacaagcaaaggaactaaaatttttatcaagcaacttgctgagttactgcaaagatttagctaatgaggatacaggaacgagtacggccgccaccacggaagtgacgtctgcacgcaagcttaccacaacagcggccgcaggcacatctgaaggacctttcgacacaagtcgtgtccctgatgctgagcaagctgcgacgagcttgacgcaacaagaggaaccctcttcacacatctcgtccttgaccaaactcagagaagtgtgcagacatctgaatcaagtaaagaataaaatgtttggaccatttttacaggggctctgcaagcacgtcggtgaaccagacacagatctgtcggcggaatcgattgggaccgtcactgctaccctagtgactaaagatgccgatgccattactgaagctgtaactgctgtgaccttgaacacagccaacacttacggtgcacagtcagcagtaaccagcgtggaaccagagacgggagtgacatacaatatttctgacacggagcttggcctattagtgtgtcagaactttcatttaatagataattccgtgtcctttatagcaagacggactcttggactctattgtaaaattatgaatcctacagatacagaaacgagtacggccgccaccacggaagtgatgtctgcacgcaagcttaccacaacagcggccgcaggcacatctgaaggacctttcgacacaagtcgtgtccctgatgctgagcaagctgcgacgagcttgacgcaacaagaggaaccctcttcacacatctcgtccttgaccaaactcagagaagtgtgcagacatctgaatcatgtaaagaataaaatgtttggaccatatttaccggggctctgcaagcacgtcgatgaaccagacacagatctgtcggcggaatcgattggaaccgtcactgctaccctagtgattaaagacgccgatgccattactgaagctgtaactgctgtgaccttgaacacagccaacacttacggtgcacagtcagcagtaaccagcgtggaaccagagacgggagtgacatacaatatttctgacacggagcttggcctattagtgtgtcagaactttcatttaatagataattccgtgtcctttatagcaagacggactcttggactctattgtaaaattatgaatcctacagacacagatctgtcggcagaatcgattgggaccgtcactgctaccctagtgactaaagacgccgatgccattactgaagctgtaactgctgtgaccttgaacacagccaacacttacggtgcacagtcagcagtaaccagcgtggaaccagagacgggagtgacatacaatatttctgacacggagcttggcctatttgtgtgtcagaactttcatttaatagataattccgtgtcctttatagcaagacggactcttggactctattgtaaaattatgaatcctacagatacaggaacgagtacggccgccaccacggaagtgatgtctgcacgcaagcttaccacaacagcggccgcaggcacatctgaaggacctttcgacacaagtcgtgtccctgatgctgagcaagctgcgacgagcttgtcgcaacaagaggaaccctcttcacacatctcgtccttgaccaaactcagagaagtgtgcagacatctgaatcaagtaaagaataaaatgtttggaccatttttaccggggctctgcaagcacgtcgatgaaccaggttcgactccacagccatgtaagctgatgacaagctcacctagtggcgaacctattaaagaatctaatgacgaatctgttgacgaagccggtgatgagtctactgatgaagccgcacaaccaaccacgctgttgacagatactcgtcgtcatgaatctatcgatgaatctattaataaatcgtatgaagaatgtggtcttgaattatatgatgatattgtcacttattaaaatatagtttatatat
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If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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