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2024-05-01 05:52:22, GGRNA.v2 : RefSeq release 222 (Jan, 2024)

LOCUS       XM_049592729            1744 bp    mRNA    linear   VRT 23-JUL-2022
DEFINITION  PREDICTED: Epinephelus fuscoguttatus cysteine-rich and
            transmembrane domain-containing protein 1-like (LOC125898785),
            mRNA.
ACCESSION   XM_049592729
VERSION     XM_049592729.1
DBLINK      BioProject: PRJNA859906
KEYWORDS    RefSeq.
SOURCE      Epinephelus fuscoguttatus (brown-marbled grouper)
  ORGANISM  Epinephelus fuscoguttatus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Perciformes; Serranoidei; Serranidae;
            Epinephelinae; Epinephelini; Epinephelus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_064763) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: Epinephelus fuscoguttatus Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.0
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1744
                     /organism="Epinephelus fuscoguttatus"
                     /mol_type="mRNA"
                     /db_xref="taxon:293821"
                     /country="China"
                     /collection_date="2018-12"
                     /linkage_group="LG12"
                     /note="scaffold1"
     gene            1..1744
                     /gene="LOC125898785"
                     /note="cysteine-rich and transmembrane domain-containing
                     protein 1-like; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 2 Proteins"
                     /db_xref="GeneID:125898785"
     CDS             237..635
                     /gene="LOC125898785"
                     /codon_start=1
                     /product="cysteine-rich and transmembrane
                     domain-containing protein 1-like"
                     /protein_id="XP_049448686.1"
                     /db_xref="GeneID:125898785"
                     /translation="
MSNDNPPPYVPPVPGGPSAPGFSSAYSSQPATFPGSPYQTFPQTYTGGGDLSYYQGPAGPQGPYLTQPGYQGYQSGPWEGPKMYGEQPKHTVFVVDQNYDDGGADGAESCLAGCSAALCCCCLWDMLTQNFC"
ORIGIN      
aaaaagataaacagaggagagacagagagagactctgacgtcaccctgtcctcgtgccgctgccggctgttgcctcgcgcacactcatccattaatccatcggtcaacacgtcggtcaactggagcgacggcaacagagaaagttcatgttgtgacatttgacgcttcgtcctgagctgagagtccatccatccatccatctgtccatccgtccatccagccgtccatccgtccccatgagtaatgataaccctcctccgtacgtccctcccgtccccggtggaccttcagctcccggcttctcttcagcttacagctctcagcctgcgacctttcctggctcaccgtaccagaccttccctcagacctacacaggtggaggagacctctcctattaccaaggaccggctggaccccaggggccatacctgactcagcctgggtaccaggggtaccagagcggcccctgggagggccctaaaatgtacggagagcagccaaaacacacagtgttcgtggtcgatcaaaactatgacgacggcggcgccgacggagccgaatcatgtctggcaggatgttcagctgctctgtgctgctgctgcctctgggacatgttgacccaaaacttctgctgacctctgaccttcaccaccactgagcctcttctttcccatcatgcaccagggccaccatgatgacaccaacctttgaccttttgaccttcattattttatcctgttagacatttgtgtcaagttcggtcagaattagtgaatgaattcttcagttatggacaaaaacacgtttgtgaggtcacagtgaccttggcttgtgtccaatctgacgtttgcgccaaattgaagagaaatcccatcaaagccgtcttgagtcacgggattcagaagaatgagacagacgtaaaggcacagtgacctttgaccttcaaattctaatcagctcattgttaagtccaagtggacatttgtgccaaatttgaagaaattcccctgaggcattcttcagacatcgtgttgacaaggatgagtcagacgaggtcacactgacctttttaccactaaagtctaatcagttcatcgttcagtccaagtggacgttcatgccaaatttgaaaaaaaaaaacccaaaaaccttgaggtgttctcgagaggtcatgttagcgagaatgaaatggacgaggtcacggtgacctttaaagagataatcaccaaagtctaatcagttcatcgtggagccccagtgacagtttgtgccaaattaaaaaaaaatccctcgaggtttctgagatgtcgtgttcacatgttctcaagaatgagatggacaaagttacagtgacctttgaccttcaaaatctaatcagttcatcgttggctcaaagtggacgtttgtgccaaatttgaagaatttctcccgggatgttgttgacatatgatgttaaagagaacaggacagcgttcttacatagcggcggtggcggctcagagtctcactgacattcatgataaacgttccagtgtttgagtcacagacgccgtcagtttcactaatgtgtttctctgttgtgtgtttttccccgacctcctgatgatgtcacacccctctgccaatgatgtgcctgcacatggcgggtcctgatctcagaccctgatgacatcataaaactattttaaatgaatcattaaatctgtttgaatttaggctaaaaacttgtttataagtgtttaca
//

by @meso_cacase at DBCLS
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If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596. [Full Text]