LOCUS       XM_048974106            2494 bp    mRNA    linear   VRT 12-JUL-2022
DEFINITION  PREDICTED: Brienomyrus brachyistius dicer 1, ribonuclease type III
            (dicer1), transcript variant X4, mRNA.
ACCESSION   XM_048974106
VERSION     XM_048974106.1
DBLINK      BioProject: PRJNA854133
KEYWORDS    RefSeq.
SOURCE      Brienomyrus brachyistius
  ORGANISM  Brienomyrus brachyistius
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Osteoglossocephala;
            Osteoglossomorpha; Osteoglossiformes; Mormyridae; Brienomyrus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_064546) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: Brienomyrus brachyistius Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.0
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2494
                     /organism="Brienomyrus brachyistius"
                     /mol_type="mRNA"
                     /isolate="T26"
                     /db_xref="taxon:42636"
                     /chromosome="14"
                     /sex="male"
                     /tissue_type="skeletal muscle"
     gene            1..2494
                     /gene="dicer1"
                     /note="dicer 1, ribonuclease type III; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 Protein"
                     /db_xref="GeneID:125707158"
     CDS             302..2479
                     /gene="dicer1"
                     /codon_start=1
                     /product="endoribonuclease Dicer isoform X4"
                     /protein_id="XP_048830063.1"
                     /db_xref="GeneID:125707158"
                     /translation="

MNTGRVENPALQFLGMAGLQLVPPASSSMGPFLGLPWQQEAIHDNIYTPRKYQVELLEAALEHNTIVCLNTGSGKTFIAVLLTKQLSHQIRGDFRGYGKRTVFLANTASSVIQQAAAIRTHSDLHVGEYTSIERTFLWTQEKWNCELIENQVLVMTCHVFLNILKNGILPLSKVNLLVFDECHLAIVDHPYQEIMTICEGNSDCPRILGLTASILNGKCDPSELEEKIQNLEKILKSSAETATDLVVLDRYALQPREVVLDCGPYTDTSGLCQRLLHELDDAIYFLDDCSVPAHREDRDPTFISKQVLSDCRGVLIVLGPWCADKVAGIMVRELQKYVKHEQEDLNRKFLLFTDTILRKVHALCEEHFSPASLDLKFVTPKVIRLLEILKEYKPFERQQFESVEWYNNRNQDNYVSWSDSEDEDEDEEIEVKEKSEASFPSPFTNILCGIIFVERRYTAVVLNRLIKEAGKQDPELAYISSNFITGHSIGKNHPRNKQMEIEFRKQEEVLRKFRAHETNLLIATNIVEEGVDIPKCNLVVRFDLPTEYRSYVQSKGRARAPISNYIMLADTEKTKAFEEDLKTYKAIEKILRNKCSKSVECSDFEADHVLDDENLLPPYVLRSEDGGPRVTINTAIGHVNRYCARLPSDPFTHLAPKCKTVELPDGTYRSILYLPINSPLRVPITGPAMNCARLSEKAVALLCCEKLHKMGELDSLWSTLTNSII"

     misc_feature    440..1033
                     /gene="dicer1"
                     /note="DEXH-box helicase domain of endoribonuclease Dicer;
                     Region: DEXHc_dicer; cd18034"
                     /db_xref="CDD:350792"
     misc_feature    order(440..451,458..460,509..532,653..655,842..844,
                     935..937)
                     /gene="dicer1"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:350792"
     misc_feature    order(617..622,689..694,767..769,773..778,785..787,
                     860..868)
                     /gene="dicer1"
                     /note="nucleic acid binding site [nucleotide binding];
                     other site"
                     /db_xref="CDD:350792"
     misc_feature    1127..1411
                     /gene="dicer1"
                     /note="Partner-binding domain of the endoribonuclease
                     Dicer; Region: Dicer_PBD; cd15903"
                     /db_xref="CDD:277191"
     misc_feature    order(1142..1147,1154..1156,1160..1165,1340..1345,
                     1352..1357,1364..1366,1373..1378,1385..1387)
                     /gene="dicer1"
                     /note="Trbp binding interface [polypeptide binding]; other
                     site"
                     /db_xref="CDD:277191"
     misc_feature    1430..2008
                     /gene="dicer1"
                     /note="C-terminal helicase domain of the endoribonuclease
                     Dicer; Region: SF2_C_dicer; cd18802"
                     /db_xref="CDD:350189"
     misc_feature    order(1661..1669,1877..1879,1934..1936,1940..1942)
                     /gene="dicer1"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:350189"
     misc_feature    order(1889..1891,1895..1897,1970..1972,1976..1978)
                     /gene="dicer1"
                     /note="ATP binding site [chemical binding]; other site"
                     /db_xref="CDD:350189"
     misc_feature    2204..2443
                     /gene="dicer1"
                     /note="Dicer dimerization domain; Region: Dicer_dimer;
                     pfam03368"
                     /db_xref="CDD:460900"
ORIGIN      

tctttgttacgttgttcactacaggcatttgaattcacggcccagaatacgcacgcatcacatagtaatcgtaacttaacaacaaagttagtagcattgcgtaacgtacgtgtttaaaaattgcatccctatgcccagtaaaaggaagtatcgcgggttagtctgagaagagccagagggaatggaggagaagggtgttccgcggctgtaagcgacagtgctactctccagctcatcgaggaaaagctagaagacaagaggagacaaagcacaaccttgcatgtaaacacaaagaaatgagatgaacactggaagagttgagaacccagctttacaattccttggtatggctggcctacagcttgtaccccctgcatcgtcatctatggggcccttccttggtctaccatggcaacaagaggccatccatgacaacatttacacaccaaggaaatatcaggttgaacttcttgaagcagctcttgaacacaatactatagtctgcttaaatactggctcagggaagacctttattgcagtactcttgacaaaacagctctctcatcaaattcggggagatttcagaggatatggcaaaagaacagttttcctggcaaatacagcatcatctgtgatccagcaagcagctgctattagaacgcattcagatcttcatgttggagaatacaccagtattgagaggacttttctgtggacacaggagaagtggaactgtgaattgattgagaaccaggtacttgttatgacctgccatgttttcctaaatattttgaagaatggaatcttaccactgtctaaagtcaatcttctcgtgtttgatgagtgtcaccttgcaattgtggaccacccgtaccaagagataatgacgatatgtgaaggcaattcagactgtccccgaattttgggtctcactgcttctatattaaatggtaaatgtgatccatcagagttggaggaaaagattcagaatctggagaagattttgaaaagcagtgcagaaactgccaccgaccttgttgtcttggatagatatgccttacagcctcgtgaggttgtgttggactgtggaccctacacagacacaagtggactctgtcagagacttctgcatgagttggatgatgcaatttattttcttgatgactgcagtgtacctgcacatcgagaggatcgagatccaacgttcatttcaaaacaggtactgagtgattgcagaggagtgctaattgtgcttggcccctggtgtgcagataaggtggcaggaatcatggtgagggaactgcaaaagtatgtcaagcatgagcaagaggatttgaaccgtaaattcctattgttcacagacactattctgaggaaagtccatgcactttgtgaagaacatttttcacctgcatctttggaccttaagtttgtcactccaaaagtaattagactgctggagatccttaaggagtacaaacccttcgaacggcagcagtttgagagtgtagagtggtataacaaccgcaatcaggataactatgtgtcgtggagtgattcagaggatgaggatgaggatgaggagattgaggtgaaggagaagtcggaggccagctttccctctcctttcactaatatcctctgtggaattatttttgttgagagacgctacactgcagttgtccttaaccggctgataaaggaagctgggaagcaggaccctgagcttgcttacatcagcagtaacttcataactgggcacagcattgggaagaatcatcctcgtaacaaacagatggagattgaattcagaaaacaggaggaggttcttcgcaagtttcgtgcccatgagaccaatttgctcattgcaactaatattgtggaagaaggagttgatattccgaaatgcaacttagtagttcgttttgacttgccgacagagtatcgttcctatgttcaatctaaaggaagagcacgggcccccatttccaattacatcatgcttgcagacacagagaaaacaaaggcttttgaggaagacctaaaaacatacaaagctattgaaaagattttgaggaataaatgctcaaaatcagtggaatgcagtgactttgaagcggatcacgtattggacgatgaaaatcttttacctccttatgtgctgcgctcagaagatggtggtcctcgagtcactataaacacagcaattggacatgttaacagatactgtgcaagattacccagtgatccttttactcacctggctccgaagtgcaagacagtggagctgcctgatggaacctacagatctatactgtatctccccatcaattctccactcagagttcccattactgggcctgcaatgaactgtgcaagattatctgagaaagcagttgcacttctttgctgtgaaaaactacacaaaatgggtgaattggattctctctggtccacactgactaattccattatatagggggggtggtcggct

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