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2024-05-04 20:03:09, GGRNA.v2 : RefSeq release 222 (Jan, 2024)

LOCUS       XM_048413252             918 bp    mRNA    linear   INV 26-MAY-2022
DEFINITION  PREDICTED: Bombus terrestris 101 kDa malaria antigen-like
            (LOC110119980), transcript variant X2, mRNA.
ACCESSION   XM_048413252
VERSION     XM_048413252.1
DBLINK      BioProject: PRJNA839043
KEYWORDS    RefSeq.
SOURCE      Bombus terrestris (buff-tailed bumblebee)
  ORGANISM  Bombus terrestris
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita;
            Aculeata; Apoidea; Anthophila; Apidae; Bombus; Bombus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_063284) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Bombus terrestris Annotation Release
                                           103
            Annotation Version          :: 103
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 9.0
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..918
                     /organism="Bombus terrestris"
                     /mol_type="mRNA"
                     /db_xref="taxon:30195"
                     /chromosome="16"
     gene            1..918
                     /gene="LOC110119980"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 47 samples
                     with support for all annotated introns"
                     /db_xref="GeneID:110119980"
     CDS             227..799
                     /gene="LOC110119980"
                     /codon_start=1
                     /product="101 kDa malaria antigen-like isoform X2"
                     /protein_id="XP_048269209.1"
                     /db_xref="GeneID:110119980"
                     /translation="
MADNNDEVLEECVNEECSVDEVDSNDEVDSNNEVNSNDEVDSNNEVDSNNEVDANDEVDANDEVDANDEVDANDEVDANDEVDANEEVDANDEVDANDEADANDEADANVEADANDEADANVEVNSNDEVDSNGEEYSDDEFSNVEENENEEGRGRRNRRAIIDPPLRRRMFLDHNGKLREPFRIRQKRS"
     misc_feature    <284..>643
                     /gene="LOC110119980"
                     /note="hypothetical protein; Provisional; Region:
                     PHA03169"
                     /db_xref="CDD:223003"
     polyA_site      918
                     /gene="LOC110119980"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
acaatgtttacatcagaaaaatgtttggaccacgtcagtcggattaagaacgcgagaaaaaaaagacaagggagataaagatagatgagaagatacgtacggcgaaaaacgaggcgttcttcggctagtactaaagaggacgttgcaaacagaggagcgttacaaagtagaaatattgtgaaagcgaacggcaaagagtggtagaaaatttacgagtttcactacaatggcggataacaatgacgaagtgttagaagaatgtgttaacgaggaatgttctgttgacgaagtggattctaacgacgaagtggattctaacaacgaagtgaattccaacgacgaagtggattctaacaacgaagtggattctaacaacgaagtggatgctaacgacgaagtggatgctaacgacgaagtggatgctaacgacgaagtggatgctaacgacgaagtggatgctaacgacgaagtggatgctaacgaagaagtggatgctaacgacgaagtggatgctaacgacgaagcggatgctaacgacgaagcggatgctaacgtcgaagcggatgctaacgacgaagcggatgctaacgtcgaagtgaattctaacgacgaagtggattctaacggcgaagaatattctgatgacgaattttctaatgttgaagaaaacgagaacgaagagggacgagggcgccggaacagaagggccataatcgacccaccgctaagaaggcggatgttccttgatcataacggaaaacttagggagccctttcgtatacgacagaaaagatcataataataattatataaatttctttatgtcacccgaatcgatcaaccaaataaattacaataaaatgtataacacatagttacagtttaaatatattaacaaactttttgaattattattaa
//

by @meso_cacase at DBCLS
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If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596. [Full Text]