2024-05-04 16:24:04, GGRNA.v2 : RefSeq release 222 (Jan, 2024)
LOCUS XM_048413251 796 bp mRNA linear INV 26-MAY-2022 DEFINITION PREDICTED: Bombus terrestris 101 kDa malaria antigen-like (LOC110119980), transcript variant X1, mRNA. ACCESSION XM_048413251 VERSION XM_048413251.1 DBLINK BioProject: PRJNA839043 KEYWORDS RefSeq. SOURCE Bombus terrestris (buff-tailed bumblebee) ORGANISM Bombus terrestris Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Apoidea; Anthophila; Apidae; Bombus; Bombus. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_063284) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Bombus terrestris Annotation Release 103 Annotation Version :: 103 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 9.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..796 /organism="Bombus terrestris" /mol_type="mRNA" /db_xref="taxon:30195" /chromosome="16" gene 1..796 /gene="LOC110119980" /note="Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns" /db_xref="GeneID:110119980" CDS 33..677 /gene="LOC110119980" /codon_start=1 /product="101 kDa malaria antigen-like isoform X1" /protein_id="XP_048269208.1" /db_xref="GeneID:110119980" /translation="
MCYDSYLKKQMCILQCLDVPNIATMADNNDEVLEECVNEECSVDEVDSNDEVDSNNEVNSNDEVDSNNEVDSNNEVDANDEVDANDEVDANDEVDANDEVDANDEVDANEEVDANDEVDANDEADANDEADANVEADANDEADANVEVNSNDEVDSNGEEYSDDEFSNVEENENEEGRGRRNRRAIIDPPLRRRMFLDHNGKLREPFRIRQKRS"
misc_feature <162..>521 /gene="LOC110119980" /note="hypothetical protein; Provisional; Region: PHA03169" /db_xref="CDD:223003" polyA_site 796 /gene="LOC110119980" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN
tatatctttcatatcaacattctagaaagtacatgtgttacgattcatatttgaagaagcaaatgtgtatattacagtgtttggatgtacctaatattgctacaatggcggataacaatgacgaagtgttagaagaatgtgttaacgaggaatgttctgttgacgaagtggattctaacgacgaagtggattctaacaacgaagtgaattccaacgacgaagtggattctaacaacgaagtggattctaacaacgaagtggatgctaacgacgaagtggatgctaacgacgaagtggatgctaacgacgaagtggatgctaacgacgaagtggatgctaacgacgaagtggatgctaacgaagaagtggatgctaacgacgaagtggatgctaacgacgaagcggatgctaacgacgaagcggatgctaacgtcgaagcggatgctaacgacgaagcggatgctaacgtcgaagtgaattctaacgacgaagtggattctaacggcgaagaatattctgatgacgaattttctaatgttgaagaaaacgagaacgaagagggacgagggcgccggaacagaagggccataatcgacccaccgctaagaaggcggatgttccttgatcataacggaaaacttagggagccctttcgtatacgacagaaaagatcataataataattatataaatttctttatgtcacccgaatcgatcaaccaaataaattacaataaaatgtataacacatagttacagtttaaatatattaacaaactttttgaattattattaa
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This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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