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2024-05-06 02:56:47, GGRNA.v2 : RefSeq release 222 (Jan, 2024)

LOCUS       XM_047148574             879 bp    mRNA    linear   INV 18-MAR-2022
DEFINITION  PREDICTED: Schistocerca americana uncharacterized LOC124622781
            (LOC124622781), mRNA.
ACCESSION   XM_047148574
VERSION     XM_047148574.1
DBLINK      BioProject: PRJNA799013
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Schistocerca americana (American grasshopper)
  ORGANISM  Schistocerca americana
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Polyneoptera; Orthoptera; Caelifera;
            Acrididea; Acridomorpha; Acridoidea; Acrididae;
            Cyrtacanthacridinae; Schistocerca.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_060125) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Schistocerca americana Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 9.0
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..879
                     /organism="Schistocerca americana"
                     /mol_type="mRNA"
                     /isolate="TAMUIC-IGC-003095"
                     /isolation_source="physical"
                     /specimen_voucher="TAMUIC-IGC-003095"
                     /db_xref="taxon:7009"
                     /chromosome="7"
                     /sex="female"
                     /tissue_type="Whole body"
                     /dev_stage="adult"
                     /country="USA: Florida, St. Augustine"
                     /collection_date="2021-03-08"
                     /collected_by="Hojun Song"
                     /identified_by="Hojun Song"
     gene            1..879
                     /gene="LOC124622781"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 1 Protein"
                     /db_xref="GeneID:124622781"
     CDS             1..879
                     /gene="LOC124622781"
                     /codon_start=1
                     /product="uncharacterized protein LOC124622781"
                     /protein_id="XP_047004530.1"
                     /db_xref="GeneID:124622781"
                     /translation="
MIMEKTMIMEKTMIMEKTMIMEKTMIMEKTMIMEKTMIMEKTMIMEKAMIMEKAIIMEKAIIMEKAIIMEKAIIMEKAVIMEKAVIMEKAVIMEKAVIMEKAVIMEKAVIMEKAVIMEKAVIMEKAVIMEKAVIMEKAVIMEKAVIMEKAVIMEKAVIMEKAVIMEKAVIMEKAVIMEKAVIMEKAVIMEKAVIMEKAVIMEKAVIMEKAVIMEKAVIMEKTVIMEKTVIMEKTVIMEKTVIMEKTVIMEKTVIMEKTVIMEKTVIMEKTIIMEKTIIMEKCRRKKQNNWVQ"
     misc_feature    <85..732
                     /gene="LOC124622781"
                     /note="UDP-3-O-[3-hydroxymyristoyl] glucosamine
                     N-acyltransferase [Cell wall/membrane/envelope
                     biogenesis]; Region: LpxD; COG1044"
                     /db_xref="CDD:223974"
     misc_feature    646..>834
                     /gene="LOC124622781"
                     /note="Left-handed parallel beta-Helix (LbetaH or LbH)
                     domain: The alignment contains 5 turns, each containing
                     three imperfect tandem repeats of a hexapeptide repeat
                     motif (X-[STAV]-X-[LIV]-[GAED]-X). Proteins containing
                     hexapeptide repeats are often enzymes...; Region: LbetaH;
                     cl00160"
                     /db_xref="CDD:444719"
ORIGIN      
atgataatggagaagactatgataatggagaagactatgataatggagaagactatgataatggagaagactatgataatggagaagactatgataatggagaagactatgataatggagaagactatgataatggagaaggctatgataatggagaaggctatcataatggagaaggctatcataatggagaaggctatcataatggagaaggctatcataatggagaaggctgtcataatggagaaggctgtcataatggagaaggctgtcataatggagaaggctgtcataatggagaaggctgtcataatggagaaggctgtcataatggagaaggctgtcataatggagaaggctgtcataatggagaaggctgtcataatggagaaggctgtcataatggagaaggctgtcataatggagaaggctgtcataatggagaaggctgtcataatggagaaggctgtcataatggagaaggctgtcataatggagaaggctgtcataatggagaaggctgtcataatggagaaggctgtcataatggagaaggctgtcataatggagaaggctgtcataatggagaaggctgtcataatggagaaggctgtcataatggagaaggctgtcataatggagaaggctgtcataatggagaagactgtcataatggagaagactgtcataatggagaagactgtcataatggagaagactgtcataatggagaagactgtcataatggagaagactgtcataatggagaagactgtcataatggagaagactgtcataatggagaagactatcataatggagaagactatcataatggagaagtgtaggagaaagaagcagaataattgggttcagtag
//

by @meso_cacase at DBCLS
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If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596. [Full Text]