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2024-03-28 23:48:32, GGRNA.v2 : RefSeq release 222 (Jan, 2024)

LOCUS       XM_046216190             745 bp    mRNA    linear   PLN 13-MAR-2022
DEFINITION  Talaromyces proteolyticus putative mitochondrial 54S ribosomal
            protein YmL33 (BGW36DRAFT_379268), mRNA.
ACCESSION   XM_046216190
VERSION     XM_046216190.1
DBLINK      BioProject: PRJNA801214
            BioSample: SAMN05720779
KEYWORDS    RefSeq.
SOURCE      Talaromyces proteolyticus
  ORGANISM  Talaromyces proteolyticus
            Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina;
            Eurotiomycetes; Eurotiomycetidae; Eurotiales; Trichocomaceae;
            Talaromyces; Talaromyces sect. Bacilispori.
REFERENCE   1  (bases 1 to 745)
  AUTHORS   Ke,Y.-H., Bonito,G., Liao,H.-L., Looney,B., Rojas-Flechas,A.,
            Nash,J., Hameed,K., Schadt,C., Martin,F., Crous,P.W., Miettinen,O.,
            Magnuson,J.K., Labbe,J., Jacobson,D., Doktycz,M.J.,
            Veneault-Fourrey,C., Kuo,A., Mondo,S., Calhoun,S., Riley,R.,
            Ohm,R., LaButti,K., Andreopoulos,B., Pangilinan,J., Nolan,M.,
            Tritt,A., Clum,A., Lipzen,A., Daum,C., Barry,K., Grigoriev,I.V. and
            Vilgalys,R.
  CONSRTM   DOE Joint Genome Institute
  TITLE     Convergent genome expansion in fungi linked to evolution of
            root-endophyte symbiosis
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 745)
  CONSRTM   NCBI Genome Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAR-2022) National Center for Biotechnology
            Information, NIH, Bethesda, MD 20894, USA
REFERENCE   3  (bases 1 to 745)
  AUTHORS   Kuo,A., Ke,Y.-H., Bonito,G., Liao,H.-L., Looney,B.,
            Rojas-Flechas,A., Nash,J., Hameed,K., Schadt,C., Martin,F.,
            Crous,P.W., Miettinen,O., Magnuson,J.K., Labbe,J., Jacobson,D.,
            Doktycz,M.J., Veneault-Fourrey,C., Mondo,S., Calhoun,S., Riley,R.,
            Ohm,R., LaButti,K., Andreopoulos,B., Pangilinan,J., Nolan,M.,
            Tritt,A., Clum,A., Lipzen,A., Daum,C., Barry,K., Grigoriev,I.V. and
            Vilgalys,R.
  CONSRTM   DOE Joint Genome Institute
  TITLE     Direct Submission
  JOURNAL   Submitted (21-DEC-2021) DOE Joint Genome Institute, 2800 Mitchell
            Drive, Walnut Creek, CA 94598-1698, USA
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. This record is derived from an annotated genomic
            sequence (NW_025764282).
            
            ##Metadata-START##
            Organism Display Name :: Talaromyces proteolyticus PMI_201 v1.0
            ##Metadata-END##
FEATURES             Location/Qualifiers
     source          1..745
                     /organism="Talaromyces proteolyticus"
                     /mol_type="mRNA"
                     /strain="PMI_201"
                     /db_xref="taxon:1131652"
                     /chromosome="Unknown"
     gene            1..745
                     /locus_tag="BGW36DRAFT_379268"
                     /db_xref="GeneID:70246477"
     CDS             234..518
                     /locus_tag="BGW36DRAFT_379268"
                     /note="50S ribosomal protein L30"
                     /codon_start=1
                     /product="putative mitochondrial 54S ribosomal protein
                     YmL33"
                     /protein_id="XP_046072411.1"
                     /db_xref="GeneID:70246477"
                     /db_xref="InterPro:IPR016082"
                     /db_xref="JGIDB:Talpro1_379268"
                     /translation="
MSYFRITLMRSAIGLPERTNMVLHALGLKKRMATVFYPVSRDVAGQIMKVKELVSVQEVDRPLTKTEVHMQRKPDLGYYVERTSEQEWEGRRYE"
ORIGIN      
ctccatgatggtctcaaaataataacacctgcccagccgatacaaccaaactctacacccgtataacgatattttgcaaatcctagcgaaaccgaccctcttcccgtcgacaccgattagagcaacattcgctcgaagccagcaaggccgcgctctcatttctcctcggccgtaattcgtctcgagctatatctcattctctgccagacaatcacaaccacacgctatacataatgagctacttccgaattactcttatgcggtcggccattggcctgcccgagcgaacgaatatggttctgcatgccctcggccttaagaagcgaatggcaacagttttctaccccgtgtcccgcgatgtagccggtcaaatcatgaaagtcaaggaattagtgtccgtgcaagaggttgaccggcctctaacaaagacagaagttcatatgcagcggaaaccagatctcgggtattacgtcgaaagaacatcggagcaagaatgggaagggaggcggtatgaatgatagtgggaaacttggtggttttgcatattctaatatttcggttctatcccggcgcaatctcttcttgagcggcaaagagcttgtgtgttatttcgctatgacacttgtcagtcgacgaatgttttattaattggattctccgccgtttgatgactgagcactggtgcaaacattcatcattctggggcgattgtactactacattcattgcatatttaaaagcactg
//

by @meso_cacase at DBCLS
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If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596. [Full Text]