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2024-05-05 20:32:42, GGRNA.v2 : RefSeq release 222 (Jan, 2024)

LOCUS       XM_045224624            1079 bp    mRNA    linear   VRT 30-NOV-2021
DEFINITION  PREDICTED: Coregonus clupeaformis uncharacterized LOC121580520
            (LOC121580520), transcript variant X3, mRNA.
ACCESSION   XM_045224624
VERSION     XM_045224624.1
DBLINK      BioProject: PRJNA780548
KEYWORDS    RefSeq.
SOURCE      Coregonus clupeaformis (lake whitefish)
  ORGANISM  Coregonus clupeaformis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii;
            Salmoniformes; Salmonidae; Coregoninae; Coregonus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_059205) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Coregonus clupeaformis Annotation
                                           Release 101
            Annotation Version          :: 101
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 9.0
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1079
                     /organism="Coregonus clupeaformis"
                     /mol_type="mRNA"
                     /isolate="EN_2021a"
                     /db_xref="taxon:59861"
                     /chromosome="14"
                     /sex="female"
                     /tissue_type="muscle"
                     /dev_stage="adult"
                     /note="dwarf form"
     gene            1..1079
                     /gene="LOC121580520"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 1 sample
                     with support for all annotated introns"
                     /db_xref="GeneID:121580520"
     CDS             265..996
                     /gene="LOC121580520"
                     /codon_start=1
                     /product="uncharacterized protein LOC121580520 isoform X3"
                     /protein_id="XP_045080559.1"
                     /db_xref="GeneID:121580520"
                     /translation="
MTTILCSVLGTVVIMTTILCSVLGTVVIMTTILCSVLGTVVIMTTILCSVLGTVVIMTTILCSVLGTVVIMTTILCSVLGTVVIMTTILCSVLGTVVIMTTILCSVLGTVVIMTTILCSVLGTVVIMTTILCSVLGTVVIMTTILCSVLGTVVIMTTILCSVLGTVVIMTTILCSVLGTVVIMTTILCSVLGTVVIMTTILCSVLGTVVIMTTILCPRYCGDHDYHPLLCPRYCGDHDYHPLS"
ORIGIN      
tgtcctaggtactgtggtgatcatgactaccatcctctgctctgtcttaggtactgtggtgatcatgactaccatcctctgctctgtcctaggtactgtggtgatcatgactaccatcctctgctctgtcctaggtactgtgatgatcatgactaccatcctctgtcctaggtactgtggtgatcatgactaccatcctctgctctgtcctaggtactgtggtgatcatgactaccatcctctgtcctaggtactgtggtgatcatgactaccatcctctgctctgtcttaggtactgtggtgatcatgactaccatcctctgctctgtcctaggtactgtggtgatcatgactaccatcctctgctctgtcctaggtactgtggtgatcatgactaccatcctctgctctgtcctaggtactgtggtgatcatgactaccatcctctgctctgtcctaggtactgtggtgatcatgactaccatcctctgctctgtcctaggtactgtggtgatcatgactaccatcctctgctctgtcctaggtactgtggtgatcatgactaccatcctctgctctgtcctaggtactgtggtgatcatgactaccatcctctgctctgtcctaggtactgtggtgatcatgactaccatcctctgctctgtcctaggtactgtggtgatcatgactaccatcctctgctctgtcctaggtactgtggtgatcatgactaccatcctctgctctgtcctaggtactgtggtgatcatgactaccatcctctgctctgtcctaggtactgtggtgatcatgactaccatcctctgctctgtcctaggtactgtggtgatcatgactaccatcctctgctctgtcctaggtactgtggtgatcatgactaccatcctctgtcctaggtactgtggtgatcatgactaccatcctctgctctgtcctaggtactgtggtgatcatgactaccatcctctgtcctaggtactgtggtgatcatgactaccatcctctgctctgtcctaggtactgtggtgatcatgactaccatcctctgtcctaggtac
//

by @meso_cacase at DBCLS
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If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596. [Full Text]