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Previous release (v1)
2025-11-16 14:09:35, GGRNA.v2 : RefSeq release 232 (Sep, 2025)
LOCUS XM_044333690 5180 bp mRNA linear VRT 15-OCT-2021
DEFINITION PREDICTED: Thunnus albacares centriolin (cntrl), mRNA.
ACCESSION XM_044333690
VERSION XM_044333690.1
DBLINK BioProject: PRJNA769113
KEYWORDS RefSeq.
SOURCE Thunnus albacares (yellowfin tuna)
ORGANISM Thunnus albacares
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
Acanthomorphata; Pelagiaria; Scombriformes; Scombridae; Thunnus.
COMMENT MODEL REFSEQ: This record is predicted by automated computational
analysis. This record is derived from a genomic sequence
(NC_058107.1) annotated using gene prediction method: Gnomon.
Also see:
Documentation of NCBI's Annotation Process
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Name :: Thunnus albacares Annotation Release
100
Annotation Version :: 100
Annotation Pipeline :: NCBI eukaryotic genome annotation
pipeline
Annotation Software Version :: 9.0
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
FEATURES Location/Qualifiers
source 1..5180
/organism="Thunnus albacares"
/mol_type="mRNA"
/db_xref="taxon:8236"
/chromosome="2"
gene 1..5180
/gene="cntrl"
/note="Derived by automated computational analysis using
gene prediction method: Gnomon. Supporting evidence
includes similarity to: 1 Protein, and 100% coverage of
the annotated genomic feature by RNAseq alignments,
including 11 samples with support for all annotated
introns"
/db_xref="GeneID:122968450"
CDS 82..4485
/gene="cntrl"
/codon_start=1
/product="centriolin"
/protein_id="XP_044189625.1"
/db_xref="GeneID:122968450"
/translation="
MSRKQSELEGRLDDMLTRIAMETQEIKELEQQLTDGQILANEALQRDLEGIISGLQEYLRSLREQARRAQQQVHSLQDENQSLQLHLQDAQRHCRQLQDTARTHTQNMSLQQEELSVLQMEAQALRDRQVESSRQQVELEAELQQLREELSRQLTLGKLERDALQAAVDNEKQSREIRESQLQSTIDTLQDDKSSLQQIVHKLQAQLDQTEDQLHQSRTQFKETRSQLEQLSAALLDEDRTRAEDKSSPEDTLSSSVEQLYRTVQQTRTSKEQVHNQNQQQIERLQAQLAQDQEHIAQLEAQLAWDQDLVTRGVEQDQELQRLRDKLQRYQSMNRHIQHKLEAELQQSRLQLQDVQQERDALLLQLRSQSDGHQKSLARLNRKLRQLSRFMCDSDQLTSEQLRSTSEQLRALNRTVELLHTQKTVDEHDDSSHQTEHTHTLEDEHTHTLQDEHTHTLQDEHTHTLQDEHTHTLQDEHTHTLQDEHTHAVEELRAELAEAQQHASRLRQQLDQVRTRTRTRTRTRTRTRTRTRSRSRTRSRTRSRTRSRIRDGGQWCFIPPGHSAPSLGSQGTQDSGLGLQYLSSPERAQQQHRPPTGGGYWVYIPPAHTDSDTGAEWRDSGGGSDTDRSSRGGTPPPPPAPAAGVSEGPSDAQTPLAGPAWLLCGSPAAVVYSPPAGGAALHCNIPEHTHREGMCVCECERLREAERLEEEKKKLRLETKQLRHTLRRHRSVKLVCDEVECVEKTLLKRRAELRQADRLLLEAQSCIHTTRDQARSAQREADTLQHRAQDSATCLLEATQHVRELQEELEELRRRRQLEEQTLREMEEVLRSRDQKFQQLSTKTHSAADRLALVLSDCQEAQRRLDSVNSQVEQQEQRLLQRKEEHHAALSRLKEVRQEEQRLQDAVKELWEQQEVLLSERRSSVSAVNEEEQKLLTLQSELNTHRAELKRVLQELLAEQQALEEVKTKRTQTLQRLHKKKDELHRTKDELHRTKDELHRTKDELDRTKDELHRTKDELHRTKDELDRTKDELHRTKDELHRTKDELDGTKDELDGTKDELHRTKDELHRTKDELHRTKDELDGTKDELDRTKDELLMKQEELDRKRDLLDGIQDEVEKKKDELVNKQHKSDQKRHKLDKMQDEVERKREELAALQQEVDSHRKESESRLKNTKQQRTELQELQEELSRRREESSSLQEQCKHLEARRRHADRCLSATEAELAKQREEHSRAQLLKQEVIRDTAAAQEQLNENSELLSLLSEQLEQKKKQLQTVEQELNESSQQQRAEHIQHKQVSAGLDDVKAAACQLEDRGRRLNHQQLQLNQLSEQLWQREKQLLCEEERLIHMRAGLQREGEELIQTEEELQKKEKEEDSREVLKEEDESFYLSTAGLRSAFNTEEERWKVELQREKLRQQEDRLKARLRCSLWNQQENLEVRRLETEESLLGLKHRLDQLDSLLTHTETHTP"
misc_feature 223..>1194
/gene="cntrl"
/note="Chromosome segregation ATPase Smc [Cell cycle
control, cell division, chromosome partitioning]; Region:
Smc; COG1196"
/db_xref="CDD:440809"
misc_feature <913..>1605
/gene="cntrl"
/note="Uncharacterized conserved protein, contains a
C-terminal ATPase domain [Function unknown]; Region:
COG4913"
/db_xref="CDD:443941"
misc_feature <2551..4299
/gene="cntrl"
/note="MAEBL; Provisional; Region: PTZ00121"
/db_xref="CDD:173412"
polyA_site 5180
/gene="cntrl"
/experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN
ctactgacactggacatcacagacccacaacatgcccgtgtgacgtcccggttggccagtgtgagacagctgttggacaggatgagcaggaagcagagcgagctggagggtcgcctcgacgacatgctgacacgcatcgccatggagacacaggagatcaaagagctggagcaacagctgaccgacggtcagattttggctaatgaagctcttcagagggatttggagggaatcatttctggacttcaggagtatctgagatccctcagagagcaggctcgtcgagctcagcagcaggttcacagtctgcaggatgaaaaccagagtctgcagctccacctgcaggacgctcagagacactgcagacagctgcaggacacggccaggacacacacacagaacatgtccctccagcaggaggagctgtctgtgttgcagatggaggcccaggctctgagagacagacaggtggagagcagcagacagcaggtggagctggaggcggagctccagcagctgagggaggagctaagccggcagctcacactgggaaagttggagcgtgatgcgctgcaggcagctgtagacaacgagaaacagagcagagagatcagagagtctcagctacagtcaaccattgacacactgcaggatgacaaatcatctctccagcagattgttcacaaacttcaggctcaactggaccaaactgaagaccagttacaccagagcagaacccagtttaaagagaccaggagccagctggagcagctgtcagctgccttgttggacgaggacagaaccagagcagaggacaagtccagtcctgaggacacgttgtccagcagtgtggaacagctctacaggaccgtccagcagaccaggactagcaaggagcaggtccacaaccaaaaccagcagcagatagaaagactgcaggcccagctggcccaggaccaggagcacatagcccagctggaagcccagctggcctgggaccaggacctggtgacccgcggcgtggagcaggatcaggagctgcagaggctccgagacaaactgcagagatatcagagcatgaacagacacatccaacacaaactggaggcggagctacagcagagccgtctgcagcttcaggacgtccagcaagagagagacgctctgctcctgcagctgcgttcacagagcgacggtcaccagaagagcctcgcacgtctgaacaggaaactacggcaactcagcaggttcatgtgcgactctgatcagctgacaagcgaacagctgagatcaacctccgaacagctgagagctctgaaccgcactgtggagctgctgcacacacagaaaactgtggatgagcacgacgacagctctcaccaaactgaacacacacacactctggaggatgaacacacacacactctgcaggacgaacacacacacactctgcaggatgaacacacacacactctgcaggatgaacacacacacactctgcaggacgaacacacacacactctgcaggatgaacacacacacgcagtggaggagctgagagcagagctggctgaagctcagcaacatgcaagcagactgagacagcagctggaccaggtcaggaccaggaccaggaccaggaccaggaccaggaccaggaccaggaccaggaccaggagcaggagcaggaccaggagcaggaccaggagcaggaccaggagcaggatcagagatggaggccagtggtgcttcatccctcctggacacagtgctcccagtctgggctctcaggggactcaggactctggtttggggctgcagtacctcagttctcctgagagggcacaacagcagcacagacctcctacaggaggcgggtactgggtctacatccccccggcacacaccgactctgacacaggagcagagtggagggacagcggaggaggcagtgatactgaccgcagctccagaggagggactcctcctcctcctcctgccccagctgcaggtgtctctgaggggccctctgacgctcagactcccctggctggacccgcctggctgctctgtggttcacctgcagctgttgtctacagtcctcctgcggggggcgccgcactgcactgtaacatccctgaacacacacacagggaaggcatgtgtgtgtgtgaatgtgagaggctcagagaggcagagcgactggaggaagagaagaagaaactacgactggaaaccaaacaactacgacacacactgagacgacacaggagtgtgaagctggtgtgtgatgaggtggagtgtgtagagaaaactctgctgaagagacgagccgaactccgtcaggctgacagactgctgctggaggctcagagctgcatacacaccaccagagaccaggccagatcagcccagcgggaggcggacaccttgcagcacagagctcaggacagcgccacctgtctgctggaagccacgcagcacgtcagagagctgcaggaggagctggaggagctgaggaggaggaggcagctggaggagcagactctgagggagatggaggaggtgctgaggagcagagatcagaagttccaacaactcagcacgaaaacacactcagctgcagacagactggctctcgtgctgtcggactgtcaggaggctcagaggcgtctggactcggtgaacagtcaggtggagcagcaggagcagaggctgcttcagaggaaggaggagcatcacgccgctctgagcagactgaaggaggtcagacaggaggagcagcgactgcaggacgccgtcaaggagctgtgggagcagcaggaggtgctgttgagtgagaggaggtcttcagtctctgctgtgaacgaggaggagcagaaactcctcacgctgcagtctgagctcaacacccacagagcagagctgaaacgggtccttcaggagctgcttgcagagcagcaggctttggaggaagtgaaaaccaaacgcacccagactctccagcggctccacaagaagaaagacgagctgcacagaaccaaggacgagctgcacagaaccaaggacgagctgcacagaaccaaggacgagctggacagaaccaaggacgagctgcacagaaccaaggacgagctgcacagaaccaaggacgagctggacagaaccaaggacgagctgcacagaaccaaggacgagctgcacagaaccaaggacgagctggacggaaccaaggacgagctggacggaaccaaggacgagctgcacagaaccaaggacgagctgcacagaaccaaggacgagctgcacagaaccaaggacgagctggatggaaccaaggacgagctggacagaaccaaggacgagctgctcatgaagcaagaagagttggacaggaagcgggatttgttggacgggatacaggacgaggtggagaagaagaaggacgagctggtgaacaagcagcacaagtcggaccagaagagacacaaactggacaaaatgcaggatgaagtggagcggaagagggaggagctggctgcgctgcaacaggaagttgattcccacagaaaagagtcagagtcacgtctcaaaaatactaaacagcagcgaacagaactgcaggagctgcaggaggagctgagcaggaggagggaggagagcagcagcctgcaggagcagtgtaaacacctggaggccagacggaggcacgccgacaggtgtctgtcagcgacggaggcggagcttgctaaacagagggaggagcatagccgcgcccagctccttaaacaggaagtgatccgagatacagcagccgctcaggagcagcttaatgagaactcggagctgctgtcgctgctcagtgaacagctggagcagaagaagaagcagctgcagactgttgaacaggagctgaacgagtccagtcagcagcagagagcagaacacatccaacacaaacaggtgtctgctgggttggatgatgttaaagctgcagcgtgtcagctggaggacagggggcgccgtctgaaccaccagcagctgcagctcaaccagctcagtgagcagctgtggcagagagagaaacagctgctttgtgaggaggagaggctcatccacatgagggcggggctacagcgggaaggggaggagctaattcagacagaggaggagctccagaagaaagagaaggaggaggacagcagggaggtgttaaaggaggaggacgagtctttctatctgtctacagctggtctgagatcagctttcaacactgaggaggagaggtggaaggttgagttgcaaagagaaaaactgagacaacaagaagaccgactaaaggctcgtcttcgctgcagtttgtggaaccagcaggagaatctggaggtgagacgactggagacggaggagagtttactgggactgaaacacagactggaccagctggactcactgctcacacacactgaaacacacactccctaacacacacacacacacacacacagcaaacattcagtaacccgtctgtctgactttaacagagaaacatatgcagctcaaactgacgtaactttatgaatctagagtcacgcagcagccgatgaaactcacacaatgttttcaaaacctcacacatccttcttctcctgttcacacacgactaaacatgaagagatactgtcgtccttctcaagttcagctgcagataatacgagtcctcatcagtctgagttacactaatcaagtctgtttagttccaaaaaaaataaatctcttcacagcggattatgcaacaggaggaaagaacttgtgcacagtctcacttattgtttactagttcagtctgtccgaccttcatcagctgcttcattaaaagatacaaatatgaacccaaactgcaataaaccatgaagatgatcctttacagctttgtggattaatctgctggttatgttcttgatgactttattaatcatttgtactttgacatgttggagccttcatagtgtttcagtgatgatgtttaatcagctggaaccagtcgatgcagctcttcagtgtggaaacactgagctgaacatctgaatgaaatcatgtgtttcaaggtttgtttgtaaaaaaacatgtaaaaactgatatttatctttgaattaaacactctgaacatgttaaagctc
//
by
@meso_cacase at
DBCLS
This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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