LOCUS       XM_042317768            2082 bp    mRNA    linear   VRT 08-JUL-2021
DEFINITION  PREDICTED: Oncorhynchus tshawytscha transmembrane protein 65-like
            (LOC121845795), transcript variant X1, mRNA.
ACCESSION   XM_042317768
VERSION     XM_042317768.1
DBLINK      BioProject: PRJNA432585
KEYWORDS    RefSeq.
SOURCE      Oncorhynchus tshawytscha (Chinook salmon)
  ORGANISM  Oncorhynchus tshawytscha
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii;
            Salmoniformes; Salmonidae; Salmoninae; Oncorhynchus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024609767.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Oncorhynchus tshawytscha Annotation
                                           Release 101
            Annotation Version          :: 101
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 9.0
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2082
                     /organism="Oncorhynchus tshawytscha"
                     /mol_type="mRNA"
                     /isolate="Ot180627B"
                     /db_xref="taxon:74940"
                     /chromosome="Unknown"
                     /sex="male"
                     /tissue_type="blood"
                     /dev_stage="Mature"
                     /country="Canada: British Columbia, Capilano River"
     gene            1..2082
                     /gene="LOC121845795"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 61 samples
                     with support for all annotated introns"
                     /db_xref="GeneID:121845795"
     CDS             496..1965
                     /gene="LOC121845795"
                     /codon_start=1
                     /product="uncharacterized protein LOC121845795 isoform X1"
                     /protein_id="XP_042173702.1"
                     /db_xref="GeneID:121845795"
                     /translation="

MYVTKPFSSVLRYVIMVFSSVLRYVIMVFSSVLRYVTMVFSSVLRYVTMVFSSVLRYVTMVFSSVLRYVTMVFSSVLRYVTMVFSSVLRYVTMVFSSVLRYVTMVFSSVLRYVIMVFSSVLRYVIMVFSSVLRYVTMVFSSVLRYVIMVFSSVLRYVTMVFSSVLRYVTMVFSSVLSYVIMVFSSPLRYVIMVFSSVLSYVIMVFSSPLRYVIMVFSSVLRYVTMVFSSVLRYVIMVFSSVLRYVTMVFSSVLRYVTMVFSSVLRFVTMVFSSVLRYVIMVFSSVLRYVTMVFSSVLRYVTMVFSSVLRYVIMVFSSVLRYVIMVFSSVLRYVIMVFSSVLRFVTMVFSSVLRYVIMVFSSVLRYVTMVFSSVLRYVIMVFSSVLRYVTMVFSSVLRYVTMVFSCVSLAGYVEALACRCGLVGPDLNPKQADMWQTRVSTHSGKAIGVAIGCILGMFPLLFFKDETKKKAVEREGKDGSLTSISTGSSN"

     misc_feature    <517..>1278
                     /gene="LOC121845795"
                     /note="Phage-related protein [Mobilome: prophages,
                     transposons]; Region: COG5412"
                     /db_xref="CDD:227699"
     misc_feature    <1129..>1716
                     /gene="LOC121845795"
                     /note="Phage-related protein [Mobilome: prophages,
                     transposons]; Region: COG5412"
                     /db_xref="CDD:227699"
     misc_feature    <1654..1881
                     /gene="LOC121845795"
                     /note="Transmembrane protein 65; Region: TMEM65;
                     pfam10507"
                     /db_xref="CDD:431326"
     polyA_site      2082
                     /gene="LOC121845795"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      

ggataccacgaaattggggagaaaaaggggtaaaatatattttaatttttttttttaaagaataatgtcaaatagaaaagttcatccatagagaataagtagattaataattaaaaggtaaagaacgcaacaattggacccaatatgggcccaggaccatagtttgagagctgtctataacgtgattctcccgtgggcagattctgcgtgttgacagagggaatctcccaggactgaatgtgatgcgtaagagctgagcagcgttagtttttttgggggggggaggtttttttttccatcactggttatttggacgtatcagaaactgggggaagacggtgcttaaacttcttcgcctcgtgtttcagactttgtttttttccccagaactctccatttctaacacgtacagtatgaacacagaagttaatcgttctgctgatcacattacttctggttttacgtcaacagagataatacagagataatacattgatgtatgtcaccaaacctttttctagcgtgttaaggtatgtaatcatggtattttctagtgtgttaaggtatgtaatcatggtattttctagtgtgttaaggtatgtaaccatggtattttctagtgtgttaaggtatgtaaccatggtattttctagtgtgttaaggtatgtaaccatggtattttctagtgtgttaaggtatgtaaccatggtattttctagtgtgttaaggtatgtaaccatggtattttctagtgtgttaaggtatgtaaccatggtattttctagtgtgttaaggtatgtaaccatggtattttctagcgtgttaaggtatgtaatcatggtattttctagcgtgttaaggtatgtaatcatggtattttctagtgtgttaaggtatgtaaccatggtattttctagtgtgttaaggtatgtaatcatggtattttccagtgtgttaaggtatgtaaccatggtattttctagtgtgttaaggtatgtaaccatggtattttctagtgtgttaagctatgtaatcatggtattttctagtccgttaaggtatgtaatcatggtattttctagtgtgttaagctatgtaatcatggtattttctagtccgttaaggtatgtaatcatggtattttctagtgtgttaaggtatgtaaccatggtattttctagtgtgttaaggtatgtaatcatggtattttccagtgtgttaaggtatgtaaccatggtattttctagtgtgttaaggtatgtaaccatggtattttctagtgtgttaaggtttgtaaccatggtattttctagtgtgttaaggtatgtaatcatggtattttctagtgtgttaaggtatgtaaccatggtattttctagtgtgttaaggtatgtaaccatggtattttctagtgtgttaaggtatgtaatcatggtattttctagtgtgttaaggtatgtaatcatggtattttctagtgtgttaaggtatgtaatcatggtattttctagtgtgttaaggtttgtaaccatggtattttctagtgtgttaaggtatgtaatcatggtattttctagtgtgttaaggtatgtaaccatggtattttctagtgtgttaaggtatgtaatcatggtattttctagtgtgttaaggtatgtaaccatggtattttctagtgtgttaaggtatgtaaccatggtattttcctgtgttagccttgcaggttacgtggaagccctggcctgtcgttgtgggttggtgggccctgatctgaaccccaaacaggctgacatgtggcagaccagagttagcacccacagtggtaaagccatcggagttgccatcggctgcatcttagggatgttcccgctcctcttcttcaaagatgagacgaagaagaaagcagtggaaagggagggtaaagatggatcactgacctccatctccactggcagcagcaattgagacaacttgaccgaaagacttaccttctcgggaagagagagagagagaacttatcattggactacggctacttcacaacctaactactgcataatgaataacctcaatcaagcgtga

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