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Previous release (v1)
2025-10-26 15:04:34, GGRNA.v2 : RefSeq release 232 (Sep, 2025)
LOCUS XM_041505470 4741 bp mRNA linear INV 09-MAY-2021
DEFINITION PREDICTED: Gigantopelta aegis F-box only protein 16-like
(LOC121377468), mRNA.
ACCESSION XM_041505470
VERSION XM_041505470.1
DBLINK BioProject: PRJNA727593
KEYWORDS RefSeq.
SOURCE Gigantopelta aegis
ORGANISM Gigantopelta aegis
Eukaryota; Metazoa; Spiralia; Lophotrochozoa; Mollusca; Gastropoda;
Neomphalina; Neomphalida; Neomphaloidea; Peltospiridae;
Gigantopelta.
COMMENT MODEL REFSEQ: This record is predicted by automated computational
analysis. This record is derived from a genomic sequence
(NC_054705.1) annotated using gene prediction method: Gnomon.
Also see:
Documentation of NCBI's Annotation Process
##Genome-Annotation-Data-START##
Annotation Provider :: NCBI
Annotation Status :: Full annotation
Annotation Name :: Gigantopelta aegis Annotation
Release 100
Annotation Version :: 100
Annotation Pipeline :: NCBI eukaryotic genome annotation
pipeline
Annotation Software Version :: 8.6
Annotation Method :: Best-placed RefSeq; Gnomon
Features Annotated :: Gene; mRNA; CDS; ncRNA
##Genome-Annotation-Data-END##
FEATURES Location/Qualifiers
source 1..4741
/organism="Gigantopelta aegis"
/mol_type="mRNA"
/isolate="Gae_Host"
/isolation_source="hydrothermal vent"
/db_xref="taxon:1735272"
/chromosome="7"
/tissue_type="foot"
/geo_loc_name="Indian Ocean"
/collection_date="2019-04"
gene 1..4741
/gene="LOC121377468"
/note="Derived by automated computational analysis using
gene prediction method: Gnomon. Supporting evidence
includes similarity to: 2 Proteins, and 100% coverage of
the annotated genomic feature by RNAseq alignments,
including 4 samples with support for all annotated
introns"
/db_xref="GeneID:121377468"
CDS 74..1105
/gene="LOC121377468"
/codon_start=1
/product="F-box only protein 16-like"
/protein_id="XP_041361404.1"
/db_xref="GeneID:121377468"
/translation="
MSKIAKNTKKSTWTPLTNQATNNKIFEERRVLIGKWYDRWTDDQRKKILDDLVSKSKRKQLDYARDLINRRVTERHLDFTRTLPRVISLYILSFLDPRSLCRCSRVCWYWKFLSELDQLWMPKCLRLGWILTFSPSPYEGGVWKRNYVENIKSLQVLRPKETMHIDLANMHMDKRNMKEKKHKSKETHTLPWRGSDPVPQDIWRYNVLSNEDDVHTVNKWRKMKAYGSAVDAFSKSMRRSKTATGQSLNSFTRRSQSLSKLHASVTSMTSPDRPQWAIKTSQLIGRQNGEVSAVVRPKPVSTPKTPRSARALTSTRSERDPPTTDLFPDKPWVVPDQMESDED"
misc_feature 299..460
/gene="LOC121377468"
/note="F-box domain found in F-box only protein 16
(FBXO16) and similar proteins; Region: F-box_FBXO16;
cd22172"
/db_xref="CDD:438943"
misc_feature order(320..322,332..334,341..346,353..358,368..370,
374..379,389..397,401..403)
/gene="LOC121377468"
/note="putative Skp1 binding site [polypeptide binding];
other site"
/db_xref="CDD:438943"
ORIGIN
ttcaatgtaaacaagttagtgctcgctttcagtgtaattaaccggtttgttaatggcatattaagtatctaatatgtcgaagatagcaaaaaatacaaagaagagcacttggactcctcttacaaaccaagcaactaacaataagattttcgaagagagaagagtgctcataggaaaatggtatgaccgatggacggatgaccagaggaagaagatattggatgatctggtttccaagagcaagagaaaacagctggactatgctagagatctcataaaccgcagagtcacagaaagacatttagacttcacacgcacactgccaagagttatctccctctacatcctctcgttcctggatccacggagtttgtgtcgatgttcacgggtctgttggtactggaaattcttgtcggaacttgaccagctgtggatgccgaagtgtttacgacttgggtggattttaacgtttagcccgagcccatatgagggaggggtatggaagagaaactacgtggaaaacatcaaaagtctacaggtgctgagaccaaaggaaacgatgcacatcgacctcgccaatatgcacatggacaagaggaacatgaaggagaagaagcacaaatcaaaagagacacacacgttgccatggcgagggtccgacccagttccgcaggacatctggcgttacaacgtcctgtccaatgaggacgatgtgcacacagtcaacaagtggagaaagatgaaagcatacgggtctgctgttgatgcattttctaagagtatgcggcgaagtaaaacagcgaccggtcaaagtctaaacagttttacacgtcgctcgcaatcactgtctaaacttcacgcgtcagtgacttcaatgacctctcccgaccgacctcagtgggccataaagacgtcccagctgattggtcgacagaacggcgaggtttccgctgtagtccggccgaagccagtcagcacgccgaagaccccgagatctgcacgagctttaacttccacgcggtccgagagagatcctccaaccacagatctgtttcccgacaagccatgggtggtgccagaccagatggaatccgatgaagattaaagggaagtaatccagttccgcttaacatccagcggttttacatgaacagtgttgaaaacaccttcacttaaatcattccataaaaagatatattattatggcattagatgaaagcagaaacaaatattacaaaataaaatagttattttaattattattgcatttaaatggaaacagaaagacaattaacttgttaatacatgtatatcaagttttcatttcaaaacagggctcgaacttaatgcaggcactgacagcaattactcttaactgcagtgtaaattactgtgggtcaggggactgtgtgtgggtgtatgtaatttttgtttggcatgcttccatcagagaactgttcaagcacgcctgtcgtgagcacaaccgctgacttcgccagagttttgtccatatcaggggtcaggagtctttactaacaaaagttttatttgtgtcgatgaatgaaaaatatagccatcagtggaagggatattactggtttttaattgtttatttgttgcaaacattaccgatttaaaattgctataagttggctgaaaattgtcatatttcagaattttgccggtggcaaaaaactttcataattgctgtaggcaacacattcctaagttcgagccttgttattaatgttatattattattattacatttaagcaaaaagagaaaatcactggttgatacatcattccataatagttgtttattatattactgcaattatatggaaacagaaaaattgcttattaatacatgtactttgtatgtcaagtatttttaaatataaaaaacttgtagaaccagttttttaaaaataaaatgttttcagtacttaaaaaacactttgtctttaagaaagcaatttctgtacttcttgaaacaatgttttactttgtttgaaaggatcttttgtagtgtttacttttattttacaactatgaaagatacttgttcttaatatctttttataaatggaaagaatattgataataaaaatgtattttttatgttttttattgctgtgataaatgtttcatctacctgcattccactctattatatatgatatttatttttatatacatgtattatattgtaaatgatccgaattgtatgatgtaattagatcaattatatgtaaatgtatggagcaaatgtttatagtcatctttaaatgggtagaatgtatattattattatccaattaagtttcaagcacgctgtcctgggcacacacctcagttgtctgtccaggacagtgggatagttgttagtggttagtgagaaagaaaagggtgtagtggtcttacacctacccatcgagtcattgaaacttgcactgggtgagagccagtaccatgatgcgaacccagtacctaccagccttatgtctgctggcttaaccactgtgccaccaaggccagttgtattaccggtattggttttgactacaaggattccactatgagtgtttgttggtatgggtttattttgagagtgttgtatccatttaggatgccatggaatattctgaatttaaccacaacactaccactggattcatccatgtatgtaccgtacatgtgtgtgcatatgtgcgtacaatgacgagggtagaatcggaggaataattattgtctctttcaggattgtttgtcatttcttttacatttattggggcatgaacaaaacaaaaatcacccgtaaaatgtgtgaatcggtgaagccgtttctcacataagtttgcatattatttttttgttttttgatacccagatgaatgtaaaagaaataacagacaatccttataattaaatttgaatcatacttgctaataataacactaaaagtttatactttattttggtccataaacaataacactttacaagacaacttgtccacataaaacgacgtcgtcagatatgacgttccctgacgacataatttttaagttcatcaagaaattaacaaacttccattgttatgtctgaaccaatgggatgacattatattgtaatgaatgtaagggaaagttaattatttgtatatagtcccatactgcagtggtgttttttatgggggtgttttttttagagaaaatgaacaaccatactattattgtgttaccgaaaaaagaagaagagtgaaatggaaagaccgagaaaaagaaacacgtgtattttaattcatattgctaacaaaaactgcactgattggcatttaatttcttgtttttttaaggcagcacaacactggattttaattggttgctttttgctttgtgtaacattttagaaaaatacatttaataataatttaagattttctatctgttttgaaaaatataaaggttgtctaaatctgttacttagcatttactttttacattttatacttaatattcttttattgaaattgatacagtgtatattcagttggcataaaaaaaagattatttatttgtagttattgaagagatgaacttgagatacataaatctaggtcagatagtaatagcattatttaaaaattgtaatgatctgctgtgatcccccccccccccaccccattctttcactgtcaccatgatgtaatttgactaaccgaaaatttaaaatttacattaactttgttttaacgacactttacctgctacatttttgtagtttatataaaccatttatgtgtcaccaaaatcttttttacaagtaacccatttcattttgggtttattaaaatcatgtatttgacataaatctaatgtctgaatgaattaaaaaggagatgaaaaaaaaaaaagtaccaggcaaatgaaattttcgtgctcagaattttcagttaaaacgttttgcttaacaccacttgagcagattgatttattaatcacggactacaggatgtcaaacattcaataattctgacatggtcttctaagaaaacccgctacgttcttcttccgttagtagcacgggatcttttattatctgctttgtcttattgtggtattgcattttctgtccgtccatgtcagtccgtaaaatgtgcatttcagggccatatcttttgtatcatttcatattggatcatcaaatgttacatgcaagtacaacttgggatggcagtgtgtcgcataccgtaactaggtcactatgacctacttttgatgcattactgtacattaaagaaaatcgttgccagggcaatactttccttgtcaattcatataagatcatcaaaccttacatgcaagtacaagttgggatggcagtgtgtcacataccataactaggtcaccatgacctacttttcatgcattgctgtacattaaagaaaatcgtttcaagcaatactttccttatcaattcatataagatcaccaaaccttacatgcaagtacaacttgggatggcggtgtgtcacataccataactaggtcaccatgacctacttttgatgcattgctgtacattaaaggaagtcgttgccagggcagtatcatccttatcaattcatataggatccttgctcgatgcgaggttggtctgggatcgatccgcgtcggtgggcccattgggctattactcgttccagccagtgcaccacgactggtatatcagaggc
//
by
@meso_cacase at
DBCLS
This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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